RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
CAST-221ENST00000508197 SPINK5Q9NQ38 1064 aaPredicted RBP20.98■□□□□ 0.95
CAST-221ENST00000508197 CHD1O14646 1710 aa20.98■□□□□ 0.95
CAST-221ENST00000508197 CAPN15O75808 1086 aa20.97■□□□□ 0.95
CAST-221ENST00000508197 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
CAST-221ENST00000508197 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
CAST-221ENST00000508197 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
CAST-221ENST00000508197 SOGA1O94964 1423 aa20.89■□□□□ 0.94
CAST-221ENST00000508197 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
CAST-221ENST00000508197 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
CAST-221ENST00000508197 CLASP1Q7Z460 1538 aa20.81■□□□□ 0.92
CAST-221ENST00000508197 ZNF219Q9P2Y4 722 aaPredicted RBP20.76■□□□□ 0.91
CAST-221ENST00000508197 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
CAST-221ENST00000508197 MAGI1Q96QZ7 1491 aaPredicted RBP20.7■□□□□ 0.9
CAST-221ENST00000508197 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
CAST-221ENST00000508197 CUX1P39880 1505 aa20.68■□□□□ 0.9
CAST-221ENST00000508197 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
CAST-221ENST00000508197 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
CAST-221ENST00000508197 DSG3P32926 999 aa20.67■□□□□ 0.9
CAST-221ENST00000508197 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
CAST-221ENST00000508197 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
CAST-221ENST00000508197 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
CAST-221ENST00000508197 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
CAST-221ENST00000508197 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
CAST-221ENST00000508197 ABCB7O75027 752 aa20.51■□□□□ 0.87
CAST-221ENST00000508197 ATF5Q9Y2D1 282 aaPredicted RBP20.51■□□□□ 0.87
CAST-221ENST00000508197 ATXN8OSP0DMR3 200 aa20.49■□□□□ 0.87
CAST-221ENST00000508197 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
CAST-221ENST00000508197 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
CAST-221ENST00000508197 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
CAST-221ENST00000508197 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
CAST-221ENST00000508197 NUP160Q12769 1436 aa20.42■□□□□ 0.86
CAST-221ENST00000508197 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
CAST-221ENST00000508197 POLA2Q14181 598 aa20.33■□□□□ 0.85
CAST-221ENST00000508197 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
CAST-221ENST00000508197 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
CAST-221ENST00000508197 FHAD1B1AJZ9 1412 aa20.3■□□□□ 0.84
CAST-221ENST00000508197 SHROOM2Q13796 1616 aa20.3■□□□□ 0.84
CAST-221ENST00000508197 JPH4Q96JJ6 628 aa20.29■□□□□ 0.84
CAST-221ENST00000508197 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.83
CAST-221ENST00000508197 FAM69CQ0P6D2 419 aa20.24■□□□□ 0.83
CAST-221ENST00000508197 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
CAST-221ENST00000508197 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
CAST-221ENST00000508197 KDM4FA0A1W2PPD8 638 aa20.18■□□□□ 0.82
CAST-221ENST00000508197 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
CAST-221ENST00000508197 ABCC10Q5T3U5 1492 aa20.17■□□□□ 0.82
CAST-221ENST00000508197 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
CAST-221ENST00000508197 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
CAST-221ENST00000508197 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
CAST-221ENST00000508197 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
CAST-221ENST00000508197 DIP2BQ9P265 1576 aa20.04■□□□□ 0.8
CAST-221ENST00000508197 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
CAST-221ENST00000508197 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
CAST-221ENST00000508197 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
CAST-221ENST00000508197 ILDR1Q86SU0 546 aaPredicted RBP19.99■□□□□ 0.79
CAST-221ENST00000508197 IGF1RP08069 1367 aa19.97■□□□□ 0.79
CAST-221ENST00000508197 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
CAST-221ENST00000508197 KDM6BO15054 1643 aa19.95■□□□□ 0.78
CAST-221ENST00000508197 TTBK1Q5TCY1 1321 aaPredicted RBP19.9■□□□□ 0.78
CAST-221ENST00000508197 PTPRGP23470 1445 aa19.9■□□□□ 0.78
CAST-221ENST00000508197 TSPOAP1O95153 1857 aa19.89■□□□□ 0.77
CAST-221ENST00000508197 COL17A1Q9UMD9 1497 aaPredicted RBP19.82■□□□□ 0.76
CAST-221ENST00000508197 ASXL2Q76L83 1435 aa19.81■□□□□ 0.76
CAST-221ENST00000508197 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
CAST-221ENST00000508197 ABCC2Q92887 1545 aa19.8■□□□□ 0.76
CAST-221ENST00000508197 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
CAST-221ENST00000508197 CARMIL1Q5VZK9 1371 aa19.78■□□□□ 0.76
CAST-221ENST00000508197 ADGRL1O94910 1474 aa19.76■□□□□ 0.75
CAST-221ENST00000508197 RBM42Q9BTD8 480 aaKnown RBP19.76■□□□□ 0.75
CAST-221ENST00000508197 PPRC1Q5VV67 1664 aaKnown RBP19.75■□□□□ 0.75
CAST-221ENST00000508197 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
CAST-221ENST00000508197 GLI2P10070 1586 aa19.74■□□□□ 0.75
CAST-221ENST00000508197 CARMIL2Q6F5E8 1435 aa19.73■□□□□ 0.75
CAST-221ENST00000508197 CUL7Q14999 1698 aa19.71■□□□□ 0.75
CAST-221ENST00000508197 UACAQ9BZF9 1416 aa19.71■□□□□ 0.75
CAST-221ENST00000508197 UHRF1BP1LA0JNW5 1464 aa19.71■□□□□ 0.75
CAST-221ENST00000508197 EPRSP07814 1512 aaKnown RBP19.67■□□□□ 0.74
CAST-221ENST00000508197 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
CAST-221ENST00000508197 KDM5BQ9UGL1 1544 aa19.65■□□□□ 0.74
CAST-221ENST00000508197 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
CAST-221ENST00000508197 MKRN4PQ13434 485 aaPredicted RBP19.6■□□□□ 0.73
CAST-221ENST00000508197 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
CAST-221ENST00000508197 MAP3K4Q9Y6R4 1608 aa19.59■□□□□ 0.73
CAST-221ENST00000508197 TEX14Q8IWB6 1497 aa19.55■□□□□ 0.72
CAST-221ENST00000508197 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
CAST-221ENST00000508197 ZCCHC11Q5TAX3 1644 aaKnown RBP19.52■□□□□ 0.72
CAST-221ENST00000508197 WDR7Q9Y4E6 1490 aa19.5■□□□□ 0.71
CAST-221ENST00000508197 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
CAST-221ENST00000508197 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
CAST-221ENST00000508197 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
CAST-221ENST00000508197 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
CAST-221ENST00000508197 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
CAST-221ENST00000508197 SPDYE2BA6NHP3 402 aa19.41■□□□□ 0.7
CAST-221ENST00000508197 SPDYE6P0CI01 402 aa19.41■□□□□ 0.7
CAST-221ENST00000508197 SPDYE2Q495Y8 402 aa19.41■□□□□ 0.7
CAST-221ENST00000508197 AKT1S1Q96B36 256 aa19.41■□□□□ 0.7
CAST-221ENST00000508197 FBXO41Q8TF61 875 aa19.39■□□□□ 0.69
CAST-221ENST00000508197 ABCA8O94911 1581 aa19.36■□□□□ 0.69
CAST-221ENST00000508197 ARID3CA6NKF2 412 aa19.33■□□□□ 0.68
CAST-221ENST00000508197 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms