RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
SMG7-212ENST00000507469 NCAPD3P42695 1498 aa16.34■□□□□ 0.21
SMG7-212ENST00000507469 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
SMG7-212ENST00000507469 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
SMG7-212ENST00000507469 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
SMG7-212ENST00000507469 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
SMG7-212ENST00000507469 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
SMG7-212ENST00000507469 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMG7-212ENST00000507469 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
SMG7-212ENST00000507469 IGF1RP08069 1367 aa16.27■□□□□ 0.2
SMG7-212ENST00000507469 TIMELESSQ9UNS1 1208 aa16.27■□□□□ 0.19
SMG7-212ENST00000507469 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
SMG7-212ENST00000507469 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
SMG7-212ENST00000507469 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
SMG7-212ENST00000507469 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
SMG7-212ENST00000507469 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
SMG7-212ENST00000507469 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
SMG7-212ENST00000507469 CFTRP13569 1480 aa16.21■□□□□ 0.19
SMG7-212ENST00000507469 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.185e-7■■□□□ 11.4
SMG7-212ENST00000507469 CUX1P39880 1505 aa16.19■□□□□ 0.18
SMG7-212ENST00000507469 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
SMG7-212ENST00000507469 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
SMG7-212ENST00000507469 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
SMG7-212ENST00000507469 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
SMG7-212ENST00000507469 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
SMG7-212ENST00000507469 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
SMG7-212ENST00000507469 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
SMG7-212ENST00000507469 RRBP1Q9P2E9 1410 aaKnown RBP16.15■□□□□ 0.18
SMG7-212ENST00000507469 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
SMG7-212ENST00000507469 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
SMG7-212ENST00000507469 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
SMG7-212ENST00000507469 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
SMG7-212ENST00000507469 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
SMG7-212ENST00000507469 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
SMG7-212ENST00000507469 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
SMG7-212ENST00000507469 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.17
SMG7-212ENST00000507469 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
SMG7-212ENST00000507469 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
SMG7-212ENST00000507469 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
SMG7-212ENST00000507469 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
SMG7-212ENST00000507469 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
SMG7-212ENST00000507469 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
SMG7-212ENST00000507469 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
SMG7-212ENST00000507469 HSPA5P11021 654 aaKnown RBP16■□□□□ 0.15
SMG7-212ENST00000507469 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
SMG7-212ENST00000507469 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
SMG7-212ENST00000507469 FOXD1Q16676 465 aa15.98■□□□□ 0.15
SMG7-212ENST00000507469 TMC1Q8TDI8 760 aa15.98■□□□□ 0.15
SMG7-212ENST00000507469 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
SMG7-212ENST00000507469 TIAM1Q13009 1591 aa15.97■□□□□ 0.15
SMG7-212ENST00000507469 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
SMG7-212ENST00000507469 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
SMG7-212ENST00000507469 CCDC18Q5T9S5 1454 aa15.95■□□□□ 0.14
SMG7-212ENST00000507469 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
SMG7-212ENST00000507469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.144e-9■■□□□ 11.6
SMG7-212ENST00000507469 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
SMG7-212ENST00000507469 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
SMG7-212ENST00000507469 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
SMG7-212ENST00000507469 TSHZ2Q9NRE2 1034 aa15.89■□□□□ 0.13
SMG7-212ENST00000507469 NESP48681 1621 aa15.88■□□□□ 0.13
SMG7-212ENST00000507469 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
SMG7-212ENST00000507469 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
SMG7-212ENST00000507469 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
SMG7-212ENST00000507469 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
SMG7-212ENST00000507469 RTL5Q5HYW3 569 aaPredicted RBP15.87■□□□□ 0.13
SMG7-212ENST00000507469 CCDC136Q96JN2 1154 aa15.87■□□□□ 0.13
SMG7-212ENST00000507469 UACAQ9BZF9 1416 aa15.87■□□□□ 0.13
SMG7-212ENST00000507469 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
SMG7-212ENST00000507469 CARD11Q9BXL7 1154 aa15.86■□□□□ 0.13
SMG7-212ENST00000507469 EFCAB5A4FU69 1503 aa15.86■□□□□ 0.13
SMG7-212ENST00000507469 ANP32EQ9BTT0 268 aa15.85■□□□□ 0.13
SMG7-212ENST00000507469 MAP3K1Q13233 1512 aa15.84■□□□□ 0.13
SMG7-212ENST00000507469 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
SMG7-212ENST00000507469 ERCC6Q03468 1493 aa15.83■□□□□ 0.13
SMG7-212ENST00000507469 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
SMG7-212ENST00000507469 ANP32AP39687 249 aaKnown RBP15.83■□□□□ 0.12
SMG7-212ENST00000507469 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
SMG7-212ENST00000507469 PKD2Q13563 968 aa15.82■□□□□ 0.12
SMG7-212ENST00000507469 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
SMG7-212ENST00000507469 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
SMG7-212ENST00000507469 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
SMG7-212ENST00000507469 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
SMG7-212ENST00000507469 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
SMG7-212ENST00000507469 RBM19Q9Y4C8 960 aaKnown RBP15.79■□□□□ 0.12
SMG7-212ENST00000507469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■□□□□ 9.1
SMG7-212ENST00000507469 DCAF11Q8TEB1 546 aa15.76■□□□□ 0.11
SMG7-212ENST00000507469 HFM1A2PYH4 1435 aa15.76■□□□□ 0.11
SMG7-212ENST00000507469 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
SMG7-212ENST00000507469 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■□ 20.5
SMG7-212ENST00000507469 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
SMG7-212ENST00000507469 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
SMG7-212ENST00000507469 ANKRD30AQ9BXX3 1397 aa15.74■□□□□ 0.11
SMG7-212ENST00000507469 NUP155O75694 1391 aa15.72■□□□□ 0.11
SMG7-212ENST00000507469 ZNF644Q9H582 1327 aaPredicted RBP15.71■□□□□ 0.1
SMG7-212ENST00000507469 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.1
SMG7-212ENST00000507469 ERICH6BQ5W0A0 696 aa15.7■□□□□ 0.1
SMG7-212ENST00000507469 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
SMG7-212ENST00000507469 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
SMG7-212ENST00000507469 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
SMG7-212ENST00000507469 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms