RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 TOP2AP11388 1531 aaKnown RBP8.72□□□□□ -1.01
CPNE4-207ENST00000506687 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.02
CPNE4-207ENST00000506687 TIMELESSQ9UNS1 1208 aa8.71□□□□□ -1.02
CPNE4-207ENST00000506687 FBXO3Q9UK99 471 aa8.7□□□□□ -1.02
CPNE4-207ENST00000506687 KDM2AQ9Y2K7 1162 aa8.7□□□□□ -1.02
CPNE4-207ENST00000506687 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-207ENST00000506687 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
CPNE4-207ENST00000506687 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
CPNE4-207ENST00000506687 AQRO60306 1485 aaKnown RBP eCLIP8.67□□□□□ -1.02
CPNE4-207ENST00000506687 CLASP1Q7Z460 1538 aa8.67□□□□□ -1.02
CPNE4-207ENST00000506687 CHD1O14646 1710 aa8.66□□□□□ -1.02
CPNE4-207ENST00000506687 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
CPNE4-207ENST00000506687 HOXD11P31277 338 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-207ENST00000506687 CCDC88BA6NC98 1476 aa8.64□□□□□ -1.03
CPNE4-207ENST00000506687 ARXQ96QS3 562 aa8.64□□□□□ -1.03
CPNE4-207ENST00000506687 ATF5Q9Y2D1 282 aaPredicted RBP8.64□□□□□ -1.03
CPNE4-207ENST00000506687 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
CPNE4-207ENST00000506687 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
CPNE4-207ENST00000506687 CHMP7Q8WUX9 453 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-207ENST00000506687 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
CPNE4-207ENST00000506687 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
CPNE4-207ENST00000506687 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-207ENST00000506687 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
CPNE4-207ENST00000506687 SYNJ2O15056 1496 aa8.58□□□□□ -1.04
CPNE4-207ENST00000506687 PKD2Q13563 968 aa8.58□□□□□ -1.04
CPNE4-207ENST00000506687 PAXIP1Q6ZW49 1069 aaPredicted RBP8.58□□□□□ -1.04
CPNE4-207ENST00000506687 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
CPNE4-207ENST00000506687 FAM69CQ0P6D2 419 aa8.57□□□□□ -1.04
CPNE4-207ENST00000506687 GTF3C3Q9Y5Q9 886 aa8.57□□□□□ -1.04
CPNE4-207ENST00000506687 DISP3Q9P2K9 1392 aa8.57□□□□□ -1.04
CPNE4-207ENST00000506687 CFAP44Q96MT7 982 aa8.56□□□□□ -1.04
CPNE4-207ENST00000506687 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
CPNE4-207ENST00000506687 BBXQ8WY36 941 aaPredicted RBP8.55□□□□□ -1.04
CPNE4-207ENST00000506687 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
CPNE4-207ENST00000506687 SNAPC4Q5SXM2 1469 aa8.55□□□□□ -1.04
CPNE4-207ENST00000506687 ABCC10Q5T3U5 1492 aa8.53□□□□□ -1.04
CPNE4-207ENST00000506687 DMRT2Q9Y5R5 561 aa8.53□□□□□ -1.04
CPNE4-207ENST00000506687 KDM6BO15054 1643 aa8.53□□□□□ -1.04
CPNE4-207ENST00000506687 TARBP1Q13395 1621 aaKnown RBP8.53□□□□□ -1.04
CPNE4-207ENST00000506687 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-207ENST00000506687 TDRD9Q8NDG6 1382 aaKnown RBP8.51□□□□□ -1.05
CPNE4-207ENST00000506687 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
CPNE4-207ENST00000506687 KIF13AQ9H1H9 1805 aa8.49□□□□□ -1.05
CPNE4-207ENST00000506687 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
CPNE4-207ENST00000506687 DNMBPQ6XZF7 1577 aa8.48□□□□□ -1.05
CPNE4-207ENST00000506687 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
CPNE4-207ENST00000506687 POLA1P09884 1462 aaPredicted RBP8.46□□□□□ -1.05
CPNE4-207ENST00000506687 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.06
CPNE4-207ENST00000506687 TSHZ2Q9NRE2 1034 aa8.46□□□□□ -1.06
CPNE4-207ENST00000506687 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
CPNE4-207ENST00000506687 HOMEZQ8IX15 550 aa8.45□□□□□ -1.06
CPNE4-207ENST00000506687 SOGA1O94964 1423 aa8.45□□□□□ -1.06
CPNE4-207ENST00000506687 RAD54L2Q9Y4B4 1467 aa8.45□□□□□ -1.06
CPNE4-207ENST00000506687 NBR1Q14596 966 aa8.44□□□□□ -1.06
CPNE4-207ENST00000506687 WDR97A6NE52 1622 aa8.43□□□□□ -1.06
CPNE4-207ENST00000506687 SPRYD3Q8NCJ5 442 aa8.42□□□□□ -1.06
CPNE4-207ENST00000506687 MAPKBP1O60336 1514 aa8.42□□□□□ -1.06
CPNE4-207ENST00000506687 DIP2BQ9P265 1576 aa8.42□□□□□ -1.06
CPNE4-207ENST00000506687 SAMD1Q6SPF0 538 aaPredicted RBP8.41□□□□□ -1.06
CPNE4-207ENST00000506687 PROM2Q8N271 834 aa8.4□□□□□ -1.06
CPNE4-207ENST00000506687 CEP170Q5SW79 1584 aa8.39□□□□□ -1.07
CPNE4-207ENST00000506687 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
CPNE4-207ENST00000506687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.38□□□□□ -1.07
CPNE4-207ENST00000506687 HNRNPUL2Q1KMD3 747 aaKnown RBP8.38□□□□□ -1.07
CPNE4-207ENST00000506687 TMEM132AQ24JP5 1023 aa8.37□□□□□ -1.07
CPNE4-207ENST00000506687 ZNF219Q9P2Y4 722 aaPredicted RBP8.37□□□□□ -1.07
CPNE4-207ENST00000506687 CUX1P39880 1505 aa8.36□□□□□ -1.07
CPNE4-207ENST00000506687 CERKQ8TCT0 537 aa8.36□□□□□ -1.07
CPNE4-207ENST00000506687 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
CPNE4-207ENST00000506687 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
CPNE4-207ENST00000506687 NUP160Q12769 1436 aa8.34□□□□□ -1.07
CPNE4-207ENST00000506687 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
CPNE4-207ENST00000506687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
CPNE4-207ENST00000506687 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
CPNE4-207ENST00000506687 WRNQ14191 1432 aaPredicted RBP eCLIP8.32□□□□□ -1.08
CPNE4-207ENST00000506687 PRG4Q92954 1404 aaPredicted RBP8.32□□□□□ -1.08
CPNE4-207ENST00000506687 FGD5Q6ZNL6 1462 aa8.31□□□□□ -1.08
CPNE4-207ENST00000506687 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
CPNE4-207ENST00000506687 KLHL34Q8N239 644 aa8.3□□□□□ -1.08
CPNE4-207ENST00000506687 COL17A1Q9UMD9 1497 aaPredicted RBP8.3□□□□□ -1.08
CPNE4-207ENST00000506687 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
CPNE4-207ENST00000506687 RGL2O15211 777 aa8.29□□□□□ -1.08
CPNE4-207ENST00000506687 MKRN4PQ13434 485 aaPredicted RBP8.29□□□□□ -1.08
CPNE4-207ENST00000506687 SPOCK2Q92563 424 aa8.29□□□□□ -1.08
CPNE4-207ENST00000506687 JPH4Q96JJ6 628 aa8.29□□□□□ -1.08
CPNE4-207ENST00000506687 U3KPZ7 1027 aaPredicted RBP8.26□□□□□ -1.09
CPNE4-207ENST00000506687 ABCA10Q8WWZ4 1543 aa8.25□□□□□ -1.09
CPNE4-207ENST00000506687 TSPOAP1O95153 1857 aa8.25□□□□□ -1.09
CPNE4-207ENST00000506687 ADCY10Q96PN6 1610 aa8.24□□□□□ -1.09
CPNE4-207ENST00000506687 PCF11O94913 1555 aaKnown RBP8.23□□□□□ -1.09
CPNE4-207ENST00000506687 DCAF8L1A6NGE4 600 aa8.23□□□□□ -1.09
CPNE4-207ENST00000506687 CHGAP10645 457 aaKnown RBP8.23□□□□□ -1.09
CPNE4-207ENST00000506687 PTPRMP28827 1452 aa8.23□□□□□ -1.09
CPNE4-207ENST00000506687 TEX14Q8IWB6 1497 aa8.22□□□□□ -1.09
CPNE4-207ENST00000506687 GLI2P10070 1586 aa8.22□□□□□ -1.09
CPNE4-207ENST00000506687 PBRM1Q86U86 1689 aa8.21□□□□□ -1.1
CPNE4-207ENST00000506687 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
CPNE4-207ENST00000506687 PLB1Q6P1J6 1458 aa8.2□□□□□ -1.1
CPNE4-207ENST00000506687 ASXL2Q76L83 1435 aa8.19□□□□□ -1.1
CPNE4-207ENST00000506687 ABCA5Q8WWZ7 1642 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms