RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
CPNE4-207ENST00000506687 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
CPNE4-207ENST00000506687 PHF23Q9BUL5 403 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-207ENST00000506687 NISCHQ9Y2I1 1504 aa11.59□□□□□ -0.55
CPNE4-207ENST00000506687 ABCC9O60706 1549 aa11.09□□□□□ -0.63
CPNE4-207ENST00000506687 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
CPNE4-207ENST00000506687 PLPPR3Q6T4P5 718 aa10.98□□□□□ -0.65
CPNE4-207ENST00000506687 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
CPNE4-207ENST00000506687 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
CPNE4-207ENST00000506687 KCNA4P22459 653 aa10.55□□□□□ -0.72
CPNE4-207ENST00000506687 SENP3Q9H4L4 574 aaPredicted RBP10.52□□□□□ -0.73
CPNE4-207ENST00000506687 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
CPNE4-207ENST00000506687 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
CPNE4-207ENST00000506687 ADRA2BP18089 450 aa10.34□□□□□ -0.75
CPNE4-207ENST00000506687 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
CPNE4-207ENST00000506687 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
CPNE4-207ENST00000506687 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
CPNE4-207ENST00000506687 SLC4A1APQ9BWU0 796 aaKnown RBP10.18□□□□□ -0.78
CPNE4-207ENST00000506687 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
CPNE4-207ENST00000506687 NACADO15069 1562 aa10.02□□□□□ -0.81
CPNE4-207ENST00000506687 PPP6R1Q9UPN7 881 aa10.02□□□□□ -0.81
CPNE4-207ENST00000506687 RTN4Q9NQC3 1192 aaKnown RBP9.97□□□□□ -0.81
CPNE4-207ENST00000506687 CC2D2AQ9P2K1 1620 aa9.94□□□□□ -0.82
CPNE4-207ENST00000506687 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
CPNE4-207ENST00000506687 TRIM41Q8WV44 630 aa9.92□□□□□ -0.82
CPNE4-207ENST00000506687 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
CPNE4-207ENST00000506687 CUX2O14529 1486 aa9.89□□□□□ -0.83
CPNE4-207ENST00000506687 DCAF8L2P0C7V8 631 aa9.86□□□□□ -0.83
CPNE4-207ENST00000506687 SHROOM4Q9ULL8 1493 aa9.83□□□□□ -0.84
CPNE4-207ENST00000506687 PPP4R3CPQ6ZMV5 832 aa9.82□□□□□ -0.84
CPNE4-207ENST00000506687 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
CPNE4-207ENST00000506687 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
CPNE4-207ENST00000506687 NCBP3Q53F19 620 aaKnown RBP9.77□□□□□ -0.85
CPNE4-207ENST00000506687 ZBTB22O15209 634 aa9.73□□□□□ -0.85
CPNE4-207ENST00000506687 FOXD1Q16676 465 aa9.71□□□□□ -0.86
CPNE4-207ENST00000506687 MYO15BQ96JP2 1530 aa9.7□□□□□ -0.86
CPNE4-207ENST00000506687 NPM3O75607 178 aaKnown RBP9.66□□□□□ -0.86
CPNE4-207ENST00000506687 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
CPNE4-207ENST00000506687 ZCCHC6Q5VYS8 1495 aaKnown RBP9.66□□□□□ -0.86
CPNE4-207ENST00000506687 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
CPNE4-207ENST00000506687 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
CPNE4-207ENST00000506687 FOXD4L1Q9NU39 408 aa9.43□□□□□ -0.9
CPNE4-207ENST00000506687 PIAS4Q8N2W9 510 aaPredicted RBP9.37□□□□□ -0.91
CPNE4-207ENST00000506687 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
CPNE4-207ENST00000506687 FKBP8Q14318 412 aa9.32□□□□□ -0.92
CPNE4-207ENST00000506687 CNKSR2Q8WXI2 1034 aa9.32□□□□□ -0.92
CPNE4-207ENST00000506687 THOC2Q8NI27 1593 aaKnown RBP9.32□□□□□ -0.92
CPNE4-207ENST00000506687 NCAPD3P42695 1498 aa9.31□□□□□ -0.92
CPNE4-207ENST00000506687 NESP48681 1621 aa9.31□□□□□ -0.92
CPNE4-207ENST00000506687 TRHP20396 242 aaPredicted RBP9.3□□□□□ -0.92
CPNE4-207ENST00000506687 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
CPNE4-207ENST00000506687 BAZ1AQ9NRL2 1556 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-207ENST00000506687 SMARCA2P51531 1590 aa9.21□□□□□ -0.93
CPNE4-207ENST00000506687 PDS5BQ9NTI5 1447 aa9.19□□□□□ -0.94
CPNE4-207ENST00000506687 RIMBP3CA6NJZ7 1639 aa9.19□□□□□ -0.94
CPNE4-207ENST00000506687 RIMBP3BA6NNM3 1639 aa9.19□□□□□ -0.94
CPNE4-207ENST00000506687 RIMBP3Q9UFD9 1639 aa9.19□□□□□ -0.94
CPNE4-207ENST00000506687 CYB5RLQ6IPT4 315 aa9.17□□□□□ -0.94
CPNE4-207ENST00000506687 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-207ENST00000506687 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
CPNE4-207ENST00000506687 LAMC3Q9Y6N6 1575 aa9.15□□□□□ -0.95
CPNE4-207ENST00000506687 ARHGEF11O15085 1522 aa9.14□□□□□ -0.95
CPNE4-207ENST00000506687 SCAF1Q9H7N4 1312 aaKnown RBP9.13□□□□□ -0.95
CPNE4-207ENST00000506687 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
CPNE4-207ENST00000506687 MRC2Q9UBG0 1479 aa9.11□□□□□ -0.95
CPNE4-207ENST00000506687 PLCB2Q00722 1185 aa9.1□□□□□ -0.95
CPNE4-207ENST00000506687 WDR62O43379 1518 aa9.09□□□□□ -0.95
CPNE4-207ENST00000506687 KIF21AQ7Z4S6 1674 aa9.06□□□□□ -0.96
CPNE4-207ENST00000506687 BCANQ96GW7 911 aa9.05□□□□□ -0.96
CPNE4-207ENST00000506687 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-207ENST00000506687 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
CPNE4-207ENST00000506687 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.97
CPNE4-207ENST00000506687 POTEDQ86YR6 584 aa9□□□□□ -0.97
CPNE4-207ENST00000506687 ARAP1Q96P48 1450 aa9□□□□□ -0.97
CPNE4-207ENST00000506687 CADPSQ9ULU8 1353 aa8.99□□□□□ -0.97
CPNE4-207ENST00000506687 ATXN8OSP0DMR3 200 aa8.97□□□□□ -0.97
CPNE4-207ENST00000506687 MSH5O43196 834 aa8.95□□□□□ -0.98
CPNE4-207ENST00000506687 SMARCA4P51532 1647 aa8.94□□□□□ -0.98
CPNE4-207ENST00000506687 RNF216Q9NWF9 866 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-207ENST00000506687 CEP164Q9UPV0 1460 aa8.93□□□□□ -0.98
CPNE4-207ENST00000506687 MROH2BQ7Z745 1585 aa8.93□□□□□ -0.98
CPNE4-207ENST00000506687 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
CPNE4-207ENST00000506687 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-207ENST00000506687 MAPK8IP2Q13387 824 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-207ENST00000506687 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
CPNE4-207ENST00000506687 PEG3Q9GZU2 1588 aa8.89□□□□□ -0.99
CPNE4-207ENST00000506687 MYCNP04198 464 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-207ENST00000506687 FANCD2Q9BXW9 1451 aa8.86□□□□□ -0.99
CPNE4-207ENST00000506687 VSIG10Q8N0Z9 540 aa8.85□□□□□ -0.99
CPNE4-207ENST00000506687 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
CPNE4-207ENST00000506687 WIZO95785 1651 aa8.81□□□□□ -1
CPNE4-207ENST00000506687 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
CPNE4-207ENST00000506687 FBXO41Q8TF61 875 aa8.81□□□□□ -1
CPNE4-207ENST00000506687 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
CPNE4-207ENST00000506687 IFT140Q96RY7 1462 aa8.8□□□□□ -1
CPNE4-207ENST00000506687 FBLN2P98095 1184 aa8.78□□□□□ -1
CPNE4-207ENST00000506687 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-207ENST00000506687 LMTK3Q96Q04 1460 aa8.76□□□□□ -1.01
CPNE4-207ENST00000506687 SOCS7O14512 581 aa8.75□□□□□ -1.01
CPNE4-207ENST00000506687 CFTRP13569 1480 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms