RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 RAB3GAP2Q9H2M9 1393 aa11.08□□□□□ -0.64
PPARGC1A-204ENST00000506055 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
PPARGC1A-204ENST00000506055 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
PPARGC1A-204ENST00000506055 PHLDB1Q86UU1 1377 aa11.05□□□□□ -0.64
PPARGC1A-204ENST00000506055 FHAD1B1AJZ9 1412 aa11.04□□□□□ -0.64
PPARGC1A-204ENST00000506055 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
PPARGC1A-204ENST00000506055 NESP48681 1621 aa11.03□□□□□ -0.64
PPARGC1A-204ENST00000506055 SETD5Q9C0A6 1442 aa11.03□□□□□ -0.64
PPARGC1A-204ENST00000506055 FHOD3Q2V2M9 1422 aa11.02□□□□□ -0.65
PPARGC1A-204ENST00000506055 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
PPARGC1A-204ENST00000506055 SIN3AQ96ST3 1273 aa11□□□□□ -0.65
PPARGC1A-204ENST00000506055 TOPBP1Q92547 1522 aa11□□□□□ -0.65
PPARGC1A-204ENST00000506055 PCF11O94913 1555 aaKnown RBP11□□□□□ -0.65
PPARGC1A-204ENST00000506055 DNMBPQ6XZF7 1577 aa11□□□□□ -0.65
PPARGC1A-204ENST00000506055 MAPKBP1O60336 1514 aa10.99□□□□□ -0.65
PPARGC1A-204ENST00000506055 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
PPARGC1A-204ENST00000506055 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.66
PPARGC1A-204ENST00000506055 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
PPARGC1A-204ENST00000506055 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
PPARGC1A-204ENST00000506055 FYCO1Q9BQS8 1478 aa10.95□□□□□ -0.66
PPARGC1A-204ENST00000506055 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
PPARGC1A-204ENST00000506055 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
PPARGC1A-204ENST00000506055 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
PPARGC1A-204ENST00000506055 CUL7Q14999 1698 aa10.92□□□□□ -0.66
PPARGC1A-204ENST00000506055 DDX10Q13206 875 aaKnown RBP10.92□□□□□ -0.66
PPARGC1A-204ENST00000506055 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
PPARGC1A-204ENST00000506055 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
PPARGC1A-204ENST00000506055 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
PPARGC1A-204ENST00000506055 HIRIP3Q9BW71 556 aaPredicted RBP10.91□□□□□ -0.66
PPARGC1A-204ENST00000506055 MTUS2Q5JR59 1369 aa10.91□□□□□ -0.66
PPARGC1A-204ENST00000506055 AQRO60306 1485 aaKnown RBP eCLIP10.9□□□□□ -0.666e-7■■■□□ 15.2
PPARGC1A-204ENST00000506055 CTTNBP2Q8WZ74 1663 aa10.9□□□□□ -0.66
PPARGC1A-204ENST00000506055 FGD6Q6ZV73 1430 aa10.88□□□□□ -0.67
PPARGC1A-204ENST00000506055 GAPVD1Q14C86 1478 aa10.88□□□□□ -0.67
PPARGC1A-204ENST00000506055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.87□□□□□ -0.67
PPARGC1A-204ENST00000506055 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
PPARGC1A-204ENST00000506055 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
PPARGC1A-204ENST00000506055 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
PPARGC1A-204ENST00000506055 SUPT16HQ9Y5B9 1047 aaKnown RBP10.87□□□□□ -0.67
PPARGC1A-204ENST00000506055 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
PPARGC1A-204ENST00000506055 PDS5BQ9NTI5 1447 aa10.85□□□□□ -0.67
PPARGC1A-204ENST00000506055 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
PPARGC1A-204ENST00000506055 ABCA5Q8WWZ7 1642 aa10.83□□□□□ -0.67
PPARGC1A-204ENST00000506055 CCDC18Q5T9S5 1454 aa10.83□□□□□ -0.68
PPARGC1A-204ENST00000506055 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
PPARGC1A-204ENST00000506055 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
PPARGC1A-204ENST00000506055 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
PPARGC1A-204ENST00000506055 CHIC2Q9UKJ5 165 aa10.81□□□□□ -0.68
PPARGC1A-204ENST00000506055 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
PPARGC1A-204ENST00000506055 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
PPARGC1A-204ENST00000506055 ARID3CA6NKF2 412 aa10.81□□□□□ -0.68
PPARGC1A-204ENST00000506055 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
PPARGC1A-204ENST00000506055 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
PPARGC1A-204ENST00000506055 RRP7BPQ9NSQ0 103 aa10.8□□□□□ -0.68
PPARGC1A-204ENST00000506055 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
PPARGC1A-204ENST00000506055 NAIPQ13075 1403 aa10.79□□□□□ -0.68
PPARGC1A-204ENST00000506055 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
PPARGC1A-204ENST00000506055 ANP32CO43423 234 aa10.78□□□□□ -0.68
PPARGC1A-204ENST00000506055 PTPN23Q9H3S7 1636 aa10.78□□□□□ -0.68
PPARGC1A-204ENST00000506055 SUPT6HQ7KZ85 1726 aaKnown RBP10.77□□□□□ -0.69
PPARGC1A-204ENST00000506055 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
PPARGC1A-204ENST00000506055 MAGI3Q5TCQ9 1506 aa10.75□□□□□ -0.69
PPARGC1A-204ENST00000506055 EHBP1L1Q8N3D4 1523 aa10.75□□□□□ -0.69
PPARGC1A-204ENST00000506055 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
PPARGC1A-204ENST00000506055 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
PPARGC1A-204ENST00000506055 BCANQ96GW7 911 aa10.74□□□□□ -0.69
PPARGC1A-204ENST00000506055 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
PPARGC1A-204ENST00000506055 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
PPARGC1A-204ENST00000506055 FKBP8Q14318 412 aa10.72□□□□□ -0.69
PPARGC1A-204ENST00000506055 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.7
PPARGC1A-204ENST00000506055 IQGAP2Q13576 1575 aa10.71□□□□□ -0.7
PPARGC1A-204ENST00000506055 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
PPARGC1A-204ENST00000506055 CDK13Q14004 1512 aaKnown RBP10.7□□□□□ -0.7
PPARGC1A-204ENST00000506055 FOXD1Q16676 465 aa10.7□□□□□ -0.7
PPARGC1A-204ENST00000506055 PBRM1Q86U86 1689 aa10.7□□□□□ -0.7
PPARGC1A-204ENST00000506055 HECW1Q76N89 1606 aa10.69□□□□□ -0.7
PPARGC1A-204ENST00000506055 MPHOSPH9Q99550 1183 aa10.69□□□□□ -0.7
PPARGC1A-204ENST00000506055 TCOF1Q13428 1488 aaKnown RBP10.68□□□□□ -0.7
PPARGC1A-204ENST00000506055 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
PPARGC1A-204ENST00000506055 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
PPARGC1A-204ENST00000506055 KDM6BO15054 1643 aa10.67□□□□□ -0.7
PPARGC1A-204ENST00000506055 ADAMTS12P58397 1594 aa10.66□□□□□ -0.7
PPARGC1A-204ENST00000506055 NEFLP07196 543 aa10.66□□□□□ -0.7
PPARGC1A-204ENST00000506055 KDM5BQ9UGL1 1544 aa10.66□□□□□ -0.7
PPARGC1A-204ENST00000506055 DENND4BO75064 1496 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-204ENST00000506055 MRC2Q9UBG0 1479 aa10.66□□□□□ -0.7
PPARGC1A-204ENST00000506055 ZNF608Q9ULD9 1512 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-204ENST00000506055 L3MBTL2Q969R5 705 aa10.65□□□□□ -0.7
PPARGC1A-204ENST00000506055 MIA2Q96PC5 1412 aa10.65□□□□□ -0.7
PPARGC1A-204ENST00000506055 ZNF644Q9H582 1327 aaPredicted RBP10.65□□□□□ -0.7
PPARGC1A-204ENST00000506055 WASHC2AQ641Q2 1341 aa10.65□□□□□ -0.71
PPARGC1A-204ENST00000506055 WDR62O43379 1518 aa10.64□□□□□ -0.71
PPARGC1A-204ENST00000506055 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
PPARGC1A-204ENST00000506055 MYT1Q01538 1121 aa10.64□□□□□ -0.71
PPARGC1A-204ENST00000506055 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
PPARGC1A-204ENST00000506055 HNRNPUQ00839 825 aaKnown RBP eCLIP10.62□□□□□ -0.71
PPARGC1A-204ENST00000506055 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
PPARGC1A-204ENST00000506055 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
PPARGC1A-204ENST00000506055 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
PPARGC1A-204ENST00000506055 DAPK1P53355 1430 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms