RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
PTPN20-215ENST00000505814 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
PTPN20-215ENST00000505814 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
PTPN20-215ENST00000505814 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
PTPN20-215ENST00000505814 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
PTPN20-215ENST00000505814 FBLN2P98095 1184 aa16.29■□□□□ 0.2
PTPN20-215ENST00000505814 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
PTPN20-215ENST00000505814 CUX1P39880 1505 aa16.28■□□□□ 0.2
PTPN20-215ENST00000505814 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
PTPN20-215ENST00000505814 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
PTPN20-215ENST00000505814 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
PTPN20-215ENST00000505814 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
PTPN20-215ENST00000505814 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
PTPN20-215ENST00000505814 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
PTPN20-215ENST00000505814 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
PTPN20-215ENST00000505814 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
PTPN20-215ENST00000505814 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
PTPN20-215ENST00000505814 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
PTPN20-215ENST00000505814 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
PTPN20-215ENST00000505814 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
PTPN20-215ENST00000505814 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
PTPN20-215ENST00000505814 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
PTPN20-215ENST00000505814 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
PTPN20-215ENST00000505814 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
PTPN20-215ENST00000505814 SOGA1O94964 1423 aa16.1■□□□□ 0.17
PTPN20-215ENST00000505814 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
PTPN20-215ENST00000505814 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTPN20-215ENST00000505814 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
PTPN20-215ENST00000505814 CHD1O14646 1710 aa16.02■□□□□ 0.15
PTPN20-215ENST00000505814 PBRM1Q86U86 1689 aa16.02■□□□□ 0.15
PTPN20-215ENST00000505814 MAGI1Q96QZ7 1491 aaPredicted RBP16■□□□□ 0.15
PTPN20-215ENST00000505814 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
PTPN20-215ENST00000505814 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
PTPN20-215ENST00000505814 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
PTPN20-215ENST00000505814 GAPVD1Q14C86 1478 aa15.96■□□□□ 0.14
PTPN20-215ENST00000505814 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
PTPN20-215ENST00000505814 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
PTPN20-215ENST00000505814 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
PTPN20-215ENST00000505814 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
PTPN20-215ENST00000505814 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
PTPN20-215ENST00000505814 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
PTPN20-215ENST00000505814 SSUH2Q9Y2M2 353 aa15.87■□□□□ 0.13
PTPN20-215ENST00000505814 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
PTPN20-215ENST00000505814 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
PTPN20-215ENST00000505814 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
PTPN20-215ENST00000505814 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
PTPN20-215ENST00000505814 PIP4P2Q8N4L2 257 aa15.82■□□□□ 0.12
PTPN20-215ENST00000505814 GRIN2AQ12879 1464 aa15.82■□□□□ 0.12
PTPN20-215ENST00000505814 NUP160Q12769 1436 aa15.8■□□□□ 0.12
PTPN20-215ENST00000505814 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
PTPN20-215ENST00000505814 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
PTPN20-215ENST00000505814 CEP170Q5SW79 1584 aa15.78■□□□□ 0.12
PTPN20-215ENST00000505814 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
PTPN20-215ENST00000505814 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
PTPN20-215ENST00000505814 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
PTPN20-215ENST00000505814 CUL7Q14999 1698 aa15.73■□□□□ 0.11
PTPN20-215ENST00000505814 ARAP1Q96P48 1450 aa15.73■□□□□ 0.11
PTPN20-215ENST00000505814 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
PTPN20-215ENST00000505814 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
PTPN20-215ENST00000505814 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
PTPN20-215ENST00000505814 IGF1RP08069 1367 aa15.69■□□□□ 0.1
PTPN20-215ENST00000505814 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
PTPN20-215ENST00000505814 KIAA0586Q9BVV6 1533 aa15.56■□□□□ 0.08
PTPN20-215ENST00000505814 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
PTPN20-215ENST00000505814 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
PTPN20-215ENST00000505814 HAX1O00165 279 aa15.53■□□□□ 0.08
PTPN20-215ENST00000505814 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
PTPN20-215ENST00000505814 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
PTPN20-215ENST00000505814 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
PTPN20-215ENST00000505814 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
PTPN20-215ENST00000505814 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
PTPN20-215ENST00000505814 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
PTPN20-215ENST00000505814 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
PTPN20-215ENST00000505814 SP7Q8TDD2 431 aaPredicted RBP15.46■□□□□ 0.07
PTPN20-215ENST00000505814 UGGT2Q9NYU1 1516 aa15.44■□□□□ 0.06
PTPN20-215ENST00000505814 CTTNBP2Q8WZ74 1663 aa15.43■□□□□ 0.06
PTPN20-215ENST00000505814 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
PTPN20-215ENST00000505814 DISP1Q96F81 1524 aa15.41■□□□□ 0.06
PTPN20-215ENST00000505814 EEA1Q15075 1411 aa15.41■□□□□ 0.06
PTPN20-215ENST00000505814 ILDR1Q86SU0 546 aaPredicted RBP15.4■□□□□ 0.06
PTPN20-215ENST00000505814 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
PTPN20-215ENST00000505814 ADCY10Q96PN6 1610 aa15.38■□□□□ 0.05
PTPN20-215ENST00000505814 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
PTPN20-215ENST00000505814 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
PTPN20-215ENST00000505814 MAPKBP1O60336 1514 aa15.33■□□□□ 0.04
PTPN20-215ENST00000505814 KIF21BO75037 1637 aa15.32■□□□□ 0.04
PTPN20-215ENST00000505814 UHRF1BP1LA0JNW5 1464 aa15.3■□□□□ 0.04
PTPN20-215ENST00000505814 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
PTPN20-215ENST00000505814 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
PTPN20-215ENST00000505814 SAMD9Q5K651 1589 aa15.28■□□□□ 0.04
PTPN20-215ENST00000505814 EVX2Q03828 476 aa15.28■□□□□ 0.04
PTPN20-215ENST00000505814 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.03
PTPN20-215ENST00000505814 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
PTPN20-215ENST00000505814 ABCC2Q92887 1545 aa15.25■□□□□ 0.03
PTPN20-215ENST00000505814 PTPRGP23470 1445 aa15.24■□□□□ 0.03
PTPN20-215ENST00000505814 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
PTPN20-215ENST00000505814 DIP2BQ9P265 1576 aa15.23■□□□□ 0.03
PTPN20-215ENST00000505814 ABCA8O94911 1581 aa15.22■□□□□ 0.03
PTPN20-215ENST00000505814 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
PTPN20-215ENST00000505814 ABCC10Q5T3U5 1492 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms