RNA–Protein interactions for RNA: ENST00000503811.5

MATR3-206, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-206ENST00000503811 FAM50AQ14320 339 aaKnown RBP29.4■■■□□ 2.3
MATR3-206ENST00000503811 SETD5Q9C0A6 1442 aa29.39■■■□□ 2.3
MATR3-206ENST00000503811 ATP1B4Q9UN42 357 aaPredicted RBP29.39■■■□□ 2.3
MATR3-206ENST00000503811 PCF11O94913 1555 aaKnown RBP29.37■■■□□ 2.29
MATR3-206ENST00000503811 KCNH8Q96L42 1107 aa29.35■■■□□ 2.29
MATR3-206ENST00000503811 SIN3AQ96ST3 1273 aa29.35■■■□□ 2.29
MATR3-206ENST00000503811 RAD54L2Q9Y4B4 1467 aa29.34■■■□□ 2.29
MATR3-206ENST00000503811 FANCD2Q9BXW9 1451 aa29.33■■■□□ 2.29
MATR3-206ENST00000503811 FHOD3Q2V2M9 1422 aa29.33■■■□□ 2.29
MATR3-206ENST00000503811 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
MATR3-206ENST00000503811 SUPT16HQ9Y5B9 1047 aaKnown RBP29.3■■■□□ 2.28
MATR3-206ENST00000503811 CFAP43Q8NDM7 1665 aa29.28■■■□□ 2.28
MATR3-206ENST00000503811 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
MATR3-206ENST00000503811 WDR97A6NE52 1622 aa29.26■■■□□ 2.27
MATR3-206ENST00000503811 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
MATR3-206ENST00000503811 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
MATR3-206ENST00000503811 NESP48681 1621 aa29.17■■■□□ 2.26
MATR3-206ENST00000503811 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
MATR3-206ENST00000503811 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
MATR3-206ENST00000503811 DDX10Q13206 875 aaKnown RBP29.15■■■□□ 2.26
MATR3-206ENST00000503811 FYCO1Q9BQS8 1478 aa29.14■■■□□ 2.26
MATR3-206ENST00000503811 HIRIP3Q9BW71 556 aaPredicted RBP29.13■■■□□ 2.25
MATR3-206ENST00000503811 CASKIN1Q8WXD9 1431 aa29.12■■■□□ 2.25
MATR3-206ENST00000503811 EFCAB5A4FU69 1503 aa29.08■■■□□ 2.25
MATR3-206ENST00000503811 AQRO60306 1485 aaKnown RBP eCLIP29.03■■■□□ 2.244e-7■■■■□ 22.7
MATR3-206ENST00000503811 PPP1R15AO75807 674 aaPredicted RBP29.01■■■□□ 2.23
MATR3-206ENST00000503811 FGD6Q6ZV73 1430 aa29.01■■■□□ 2.23
MATR3-206ENST00000503811 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
MATR3-206ENST00000503811 CTTNBP2Q8WZ74 1663 aa29■■■□□ 2.23
MATR3-206ENST00000503811 CUL7Q14999 1698 aa29■■■□□ 2.23
MATR3-206ENST00000503811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.98■■■□□ 2.235e-19■■□□□ 13.5
MATR3-206ENST00000503811 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
MATR3-206ENST00000503811 FMN1Q68DA7 1419 aa28.96■■■□□ 2.23
MATR3-206ENST00000503811 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.23
MATR3-206ENST00000503811 TIMELESSQ9UNS1 1208 aa28.94■■■□□ 2.22
MATR3-206ENST00000503811 MTUS2Q5JR59 1369 aa28.93■■■□□ 2.22
MATR3-206ENST00000503811 URB2Q14146 1524 aaKnown RBP28.93■■■□□ 2.22
MATR3-206ENST00000503811 CCDC18Q5T9S5 1454 aa28.9■■■□□ 2.22
MATR3-206ENST00000503811 LRRIQ1Q96JM4 1722 aa28.88■■■□□ 2.21
MATR3-206ENST00000503811 MYT1Q01538 1121 aa28.86■■■□□ 2.21
MATR3-206ENST00000503811 BCANQ96GW7 911 aa28.86■■■□□ 2.21
MATR3-206ENST00000503811 TSHZ2Q9NRE2 1034 aa28.85■■■□□ 2.21
MATR3-206ENST00000503811 HFM1A2PYH4 1435 aa28.84■■■□□ 2.21
MATR3-206ENST00000503811 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
MATR3-206ENST00000503811 SAMD9Q5K651 1589 aa28.83■■■□□ 2.21
MATR3-206ENST00000503811 NCOA2Q15596 1464 aa28.83■■■□□ 2.21
MATR3-206ENST00000503811 PTPN23Q9H3S7 1636 aa28.81■■■□□ 2.2
MATR3-206ENST00000503811 UACAQ9BZF9 1416 aa28.8■■■□□ 2.2
MATR3-206ENST00000503811 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
MATR3-206ENST00000503811 NAIPQ13075 1403 aa28.79■■■□□ 2.2
MATR3-206ENST00000503811 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
MATR3-206ENST00000503811 GAPVD1Q14C86 1478 aa28.79■■■□□ 2.2
MATR3-206ENST00000503811 MYOM3Q5VTT5 1437 aa28.78■■■□□ 2.2
MATR3-206ENST00000503811 TRIM52Q96A61 297 aa28.78■■■□□ 2.2
MATR3-206ENST00000503811 FKBP8Q14318 412 aa28.76■■■□□ 2.19
MATR3-206ENST00000503811 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
MATR3-206ENST00000503811 ANP32CO43423 234 aa28.74■■■□□ 2.19
MATR3-206ENST00000503811 LAMC3Q9Y6N6 1575 aa28.72■■■□□ 2.19
MATR3-206ENST00000503811 MAGI3Q5TCQ9 1506 aa28.71■■■□□ 2.19
MATR3-206ENST00000503811 CCER2I3L3R5 266 aa28.7■■■□□ 2.19
MATR3-206ENST00000503811 RRP7BPQ9NSQ0 103 aa28.67■■■□□ 2.18
MATR3-206ENST00000503811 CHIC2Q9UKJ5 165 aa28.67■■■□□ 2.18
MATR3-206ENST00000503811 KDM5BQ9UGL1 1544 aa28.67■■■□□ 2.18
MATR3-206ENST00000503811 SUPT6HQ7KZ85 1726 aaKnown RBP28.66■■■□□ 2.18
MATR3-206ENST00000503811 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
MATR3-206ENST00000503811 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.17
MATR3-206ENST00000503811 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
MATR3-206ENST00000503811 ARHGEF11O15085 1522 aa28.6■■■□□ 2.17
MATR3-206ENST00000503811 DENND4BO75064 1496 aaPredicted RBP28.58■■■□□ 2.17
MATR3-206ENST00000503811 ARID3CA6NKF2 412 aa28.58■■■□□ 2.16
MATR3-206ENST00000503811 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
MATR3-206ENST00000503811 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
MATR3-206ENST00000503811 KDM6BO15054 1643 aa28.54■■■□□ 2.16
MATR3-206ENST00000503811 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
MATR3-206ENST00000503811 CDK13Q14004 1512 aaKnown RBP28.49■■■□□ 2.15
MATR3-206ENST00000503811 TCOF1Q13428 1488 aaKnown RBP28.49■■■□□ 2.15
MATR3-206ENST00000503811 NEFLP07196 543 aa28.48■■■□□ 2.15
MATR3-206ENST00000503811 HSPA5P11021 654 aaKnown RBP28.47■■■□□ 2.15
MATR3-206ENST00000503811 WASHC2AQ641Q2 1341 aa28.47■■■□□ 2.15
MATR3-206ENST00000503811 EPRSP07814 1512 aaKnown RBP28.47■■■□□ 2.15
MATR3-206ENST00000503811 FOXD1Q16676 465 aa28.46■■■□□ 2.15
MATR3-206ENST00000503811 HECW1Q76N89 1606 aa28.44■■■□□ 2.14
MATR3-206ENST00000503811 GCC2Q8IWJ2 1684 aa28.44■■■□□ 2.14
MATR3-206ENST00000503811 IQGAP2Q13576 1575 aa28.41■■■□□ 2.14
MATR3-206ENST00000503811 MPHOSPH9Q99550 1183 aa28.39■■■□□ 2.14
MATR3-206ENST00000503811 HNRNPUQ00839 825 aaKnown RBP eCLIP28.38■■■□□ 2.13
MATR3-206ENST00000503811 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
MATR3-206ENST00000503811 L3MBTL2Q969R5 705 aa28.36■■■□□ 2.13
MATR3-206ENST00000503811 AKNAQ7Z591 1439 aa28.35■■■□□ 2.13
MATR3-206ENST00000503811 WDR62O43379 1518 aa28.34■■■□□ 2.13
MATR3-206ENST00000503811 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
MATR3-206ENST00000503811 MIA2Q96PC5 1412 aa28.32■■■□□ 2.12
MATR3-206ENST00000503811 C11orf95C9JLR9 678 aaPredicted RBP28.32■■■□□ 2.12
MATR3-206ENST00000503811 EIF4G2P78344 907 aaKnown RBP eCLIP28.32■■■□□ 2.12
MATR3-206ENST00000503811 CCDC184Q52MB2 194 aa28.31■■■□□ 2.12
MATR3-206ENST00000503811 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
MATR3-206ENST00000503811 ZNF644Q9H582 1327 aaPredicted RBP28.28■■■□□ 2.12
MATR3-206ENST00000503811 ANP32EQ9BTT0 268 aa28.27■■■□□ 2.12
MATR3-206ENST00000503811 RBM19Q9Y4C8 960 aaKnown RBP28.27■■■□□ 2.12
MATR3-206ENST00000503811 NBPF8Q3BBV2 869 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms