RNA–Protein interactions for RNA: ENST00000503192.5

ARRDC3-202, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-202ENST00000503192 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
ARRDC3-202ENST00000503192 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
ARRDC3-202ENST00000503192 ABCC8Q09428 1581 aa12.23□□□□□ -0.45
ARRDC3-202ENST00000503192 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
ARRDC3-202ENST00000503192 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
ARRDC3-202ENST00000503192 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
ARRDC3-202ENST00000503192 EEA1Q15075 1411 aa12.18□□□□□ -0.46
ARRDC3-202ENST00000503192 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
ARRDC3-202ENST00000503192 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
ARRDC3-202ENST00000503192 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
ARRDC3-202ENST00000503192 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
ARRDC3-202ENST00000503192 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
ARRDC3-202ENST00000503192 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
ARRDC3-202ENST00000503192 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
ARRDC3-202ENST00000503192 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
ARRDC3-202ENST00000503192 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
ARRDC3-202ENST00000503192 CUX1P39880 1505 aa12.11□□□□□ -0.47
ARRDC3-202ENST00000503192 POTEHQ6S545 545 aa12.1□□□□□ -0.47
ARRDC3-202ENST00000503192 FAM9AQ8IZU1 332 aaPredicted RBP12.09□□□□□ -0.47
ARRDC3-202ENST00000503192 DNMBPQ6XZF7 1577 aa12.09□□□□□ -0.47
ARRDC3-202ENST00000503192 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.48
ARRDC3-202ENST00000503192 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
ARRDC3-202ENST00000503192 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
ARRDC3-202ENST00000503192 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
ARRDC3-202ENST00000503192 THOC2Q8NI27 1593 aaKnown RBP12.04□□□□□ -0.48
ARRDC3-202ENST00000503192 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.49
ARRDC3-202ENST00000503192 PITPNM1O00562 1244 aa12.01□□□□□ -0.49
ARRDC3-202ENST00000503192 WDR62O43379 1518 aa12.01□□□□□ -0.49
ARRDC3-202ENST00000503192 CEP162Q5TB80 1403 aa12□□□□□ -0.49
ARRDC3-202ENST00000503192 POLA1P09884 1462 aaPredicted RBP11.97□□□□□ -0.49
ARRDC3-202ENST00000503192 SOGA1O94964 1423 aa11.97□□□□□ -0.49
ARRDC3-202ENST00000503192 SPDYE1Q8NFV5 336 aaPredicted RBP11.96□□□□□ -0.49
ARRDC3-202ENST00000503192 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
ARRDC3-202ENST00000503192 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
ARRDC3-202ENST00000503192 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
ARRDC3-202ENST00000503192 KIF21BO75037 1637 aa11.93□□□□□ -0.5
ARRDC3-202ENST00000503192 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
ARRDC3-202ENST00000503192 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
ARRDC3-202ENST00000503192 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
ARRDC3-202ENST00000503192 CUX2O14529 1486 aa11.91□□□□□ -0.5
ARRDC3-202ENST00000503192 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
ARRDC3-202ENST00000503192 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
ARRDC3-202ENST00000503192 CENPBP07199 599 aaPredicted RBP11.9□□□□□ -0.5
ARRDC3-202ENST00000503192 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
ARRDC3-202ENST00000503192 ABCA10Q8WWZ4 1543 aa11.9□□□□□ -0.5
ARRDC3-202ENST00000503192 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
ARRDC3-202ENST00000503192 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
ARRDC3-202ENST00000503192 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
ARRDC3-202ENST00000503192 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
ARRDC3-202ENST00000503192 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
ARRDC3-202ENST00000503192 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
ARRDC3-202ENST00000503192 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
ARRDC3-202ENST00000503192 ABCA5Q8WWZ7 1642 aa11.83□□□□□ -0.52
ARRDC3-202ENST00000503192 MYT1Q01538 1121 aa11.83□□□□□ -0.52
ARRDC3-202ENST00000503192 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
ARRDC3-202ENST00000503192 ZNF608Q9ULD9 1512 aaPredicted RBP11.82□□□□□ -0.52
ARRDC3-202ENST00000503192 AQRO60306 1485 aaKnown RBP eCLIP11.82□□□□□ -0.524e-8■■■■■ 28.5
ARRDC3-202ENST00000503192 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
ARRDC3-202ENST00000503192 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
ARRDC3-202ENST00000503192 IGF1RP08069 1367 aa11.79□□□□□ -0.52
ARRDC3-202ENST00000503192 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
ARRDC3-202ENST00000503192 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
ARRDC3-202ENST00000503192 NEUROD1Q13562 356 aa11.77□□□□□ -0.53
ARRDC3-202ENST00000503192 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
ARRDC3-202ENST00000503192 CUL7Q14999 1698 aa11.76□□□□□ -0.53
ARRDC3-202ENST00000503192 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
ARRDC3-202ENST00000503192 UBTFP17480 764 aaKnown RBP11.75□□□□□ -0.53
ARRDC3-202ENST00000503192 PROM2Q8N271 834 aa11.75□□□□□ -0.53
ARRDC3-202ENST00000503192 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
ARRDC3-202ENST00000503192 CLIP1P30622 1438 aa11.75□□□□□ -0.53
ARRDC3-202ENST00000503192 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
ARRDC3-202ENST00000503192 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
ARRDC3-202ENST00000503192 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
ARRDC3-202ENST00000503192 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.53
ARRDC3-202ENST00000503192 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
ARRDC3-202ENST00000503192 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
ARRDC3-202ENST00000503192 ADAMTS12P58397 1594 aa11.69□□□□□ -0.54
ARRDC3-202ENST00000503192 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
ARRDC3-202ENST00000503192 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
ARRDC3-202ENST00000503192 MAGI1Q96QZ7 1491 aaPredicted RBP11.68□□□□□ -0.54
ARRDC3-202ENST00000503192 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
ARRDC3-202ENST00000503192 CHD1O14646 1710 aa11.66□□□□□ -0.54
ARRDC3-202ENST00000503192 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.55
ARRDC3-202ENST00000503192 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
ARRDC3-202ENST00000503192 GRIN2AQ12879 1464 aa11.61□□□□□ -0.55
ARRDC3-202ENST00000503192 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
ARRDC3-202ENST00000503192 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
ARRDC3-202ENST00000503192 RRBP1Q9P2E9 1410 aaKnown RBP11.59□□□□□ -0.55
ARRDC3-202ENST00000503192 FKBP8Q14318 412 aa11.58□□□□□ -0.56
ARRDC3-202ENST00000503192 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
ARRDC3-202ENST00000503192 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
ARRDC3-202ENST00000503192 CEP170Q5SW79 1584 aa11.55□□□□□ -0.56
ARRDC3-202ENST00000503192 HAX1O00165 279 aa11.55□□□□□ -0.56
ARRDC3-202ENST00000503192 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
ARRDC3-202ENST00000503192 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
ARRDC3-202ENST00000503192 IQGAP2Q13576 1575 aa11.53□□□□□ -0.56
ARRDC3-202ENST00000503192 KIAA0586Q9BVV6 1533 aa11.52□□□□□ -0.57
ARRDC3-202ENST00000503192 NUP160Q12769 1436 aa11.52□□□□□ -0.57
ARRDC3-202ENST00000503192 MIER1Q8N108 512 aa11.51□□□□□ -0.57
ARRDC3-202ENST00000503192 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms