RNA–Protein interactions for RNA: ENST00000503192.5

ARRDC3-202, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-202ENST00000503192 AEBP2Q6ZN18 517 aaPredicted RBP22.1■■□□□ 1.13
ARRDC3-202ENST00000503192 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
ARRDC3-202ENST00000503192 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
ARRDC3-202ENST00000503192 PHF23Q9BUL5 403 aaPredicted RBP18.67■□□□□ 0.58
ARRDC3-202ENST00000503192 FOXD1Q16676 465 aa17.48■□□□□ 0.39
ARRDC3-202ENST00000503192 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
ARRDC3-202ENST00000503192 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
ARRDC3-202ENST00000503192 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
ARRDC3-202ENST00000503192 ADRA2BP18089 450 aa16.5■□□□□ 0.23
ARRDC3-202ENST00000503192 PIAS4Q8N2W9 510 aaPredicted RBP16.39■□□□□ 0.21
ARRDC3-202ENST00000503192 MSH5O43196 834 aa16.3■□□□□ 0.2
ARRDC3-202ENST00000503192 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
ARRDC3-202ENST00000503192 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
ARRDC3-202ENST00000503192 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
ARRDC3-202ENST00000503192 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
ARRDC3-202ENST00000503192 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
ARRDC3-202ENST00000503192 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
ARRDC3-202ENST00000503192 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
ARRDC3-202ENST00000503192 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
ARRDC3-202ENST00000503192 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
ARRDC3-202ENST00000503192 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
ARRDC3-202ENST00000503192 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
ARRDC3-202ENST00000503192 KCNA4P22459 653 aa14.3□□□□□ -0.12
ARRDC3-202ENST00000503192 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
ARRDC3-202ENST00000503192 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
ARRDC3-202ENST00000503192 ABCC9O60706 1549 aa14.13□□□□□ -0.15
ARRDC3-202ENST00000503192 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
ARRDC3-202ENST00000503192 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
ARRDC3-202ENST00000503192 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
ARRDC3-202ENST00000503192 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
ARRDC3-202ENST00000503192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
ARRDC3-202ENST00000503192 NACADO15069 1562 aa13.78□□□□□ -0.2
ARRDC3-202ENST00000503192 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
ARRDC3-202ENST00000503192 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
ARRDC3-202ENST00000503192 CACNB1Q02641 598 aaPredicted RBP13.74□□□□□ -0.21
ARRDC3-202ENST00000503192 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
ARRDC3-202ENST00000503192 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
ARRDC3-202ENST00000503192 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
ARRDC3-202ENST00000503192 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
ARRDC3-202ENST00000503192 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
ARRDC3-202ENST00000503192 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
ARRDC3-202ENST00000503192 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
ARRDC3-202ENST00000503192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
ARRDC3-202ENST00000503192 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
ARRDC3-202ENST00000503192 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
ARRDC3-202ENST00000503192 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
ARRDC3-202ENST00000503192 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
ARRDC3-202ENST00000503192 APLP2Q06481 763 aa13.28□□□□□ -0.28
ARRDC3-202ENST00000503192 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
ARRDC3-202ENST00000503192 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.29
ARRDC3-202ENST00000503192 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
ARRDC3-202ENST00000503192 CAPN15O75808 1086 aa13.2□□□□□ -0.3
ARRDC3-202ENST00000503192 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
ARRDC3-202ENST00000503192 ZBTB22O15209 634 aa13.16□□□□□ -0.3
ARRDC3-202ENST00000503192 DSG3P32926 999 aa13.13□□□□□ -0.31
ARRDC3-202ENST00000503192 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
ARRDC3-202ENST00000503192 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
ARRDC3-202ENST00000503192 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
ARRDC3-202ENST00000503192 HRCP23327 699 aa13.02□□□□□ -0.33
ARRDC3-202ENST00000503192 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
ARRDC3-202ENST00000503192 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
ARRDC3-202ENST00000503192 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
ARRDC3-202ENST00000503192 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
ARRDC3-202ENST00000503192 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
ARRDC3-202ENST00000503192 ABCB7O75027 752 aa12.9□□□□□ -0.34
ARRDC3-202ENST00000503192 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
ARRDC3-202ENST00000503192 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
ARRDC3-202ENST00000503192 WIZO95785 1651 aa12.86□□□□□ -0.35
ARRDC3-202ENST00000503192 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
ARRDC3-202ENST00000503192 POLA2Q14181 598 aa12.8□□□□□ -0.36
ARRDC3-202ENST00000503192 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
ARRDC3-202ENST00000503192 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
ARRDC3-202ENST00000503192 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
ARRDC3-202ENST00000503192 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
ARRDC3-202ENST00000503192 EHMT2Q96KQ7 1210 aa12.73□□□□□ -0.37
ARRDC3-202ENST00000503192 PCGF6Q9BYE7 350 aa12.71□□□□□ -0.37
ARRDC3-202ENST00000503192 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
ARRDC3-202ENST00000503192 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
ARRDC3-202ENST00000503192 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
ARRDC3-202ENST00000503192 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
ARRDC3-202ENST00000503192 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
ARRDC3-202ENST00000503192 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
ARRDC3-202ENST00000503192 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
ARRDC3-202ENST00000503192 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
ARRDC3-202ENST00000503192 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
ARRDC3-202ENST00000503192 LOC105371045A0A1W2PR82 267 aa12.52□□□□□ -0.41
ARRDC3-202ENST00000503192 PPARGC1BQ86YN6 1023 aaKnown RBP12.42□□□□□ -0.42
ARRDC3-202ENST00000503192 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
ARRDC3-202ENST00000503192 FBLN2P98095 1184 aa12.41□□□□□ -0.42
ARRDC3-202ENST00000503192 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
ARRDC3-202ENST00000503192 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
ARRDC3-202ENST00000503192 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
ARRDC3-202ENST00000503192 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
ARRDC3-202ENST00000503192 CFTRP13569 1480 aa12.34□□□□□ -0.43
ARRDC3-202ENST00000503192 LAMC3Q9Y6N6 1575 aa12.33□□□□□ -0.44
ARRDC3-202ENST00000503192 NESP48681 1621 aa12.33□□□□□ -0.44
ARRDC3-202ENST00000503192 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
ARRDC3-202ENST00000503192 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
ARRDC3-202ENST00000503192 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
ARRDC3-202ENST00000503192 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms