RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ARHGAP35Q9NRY4 1499 aa10.76□□□□□ -0.69
PDGFC-203ENST00000502773 GAPVD1Q14C86 1478 aa10.75□□□□□ -0.69
PDGFC-203ENST00000502773 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
PDGFC-203ENST00000502773 TIMELESSQ9UNS1 1208 aa10.75□□□□□ -0.69
PDGFC-203ENST00000502773 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
PDGFC-203ENST00000502773 DIEXFQ68CQ4 756 aaKnown RBP10.73□□□□□ -0.69
PDGFC-203ENST00000502773 CDK11AQ9UQ88 783 aaPredicted RBP10.73□□□□□ -0.69
PDGFC-203ENST00000502773 FYCO1Q9BQS8 1478 aa10.73□□□□□ -0.69
PDGFC-203ENST00000502773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
PDGFC-203ENST00000502773 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
PDGFC-203ENST00000502773 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
PDGFC-203ENST00000502773 MTUS2Q5JR59 1369 aa10.7□□□□□ -0.7
PDGFC-203ENST00000502773 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
PDGFC-203ENST00000502773 RAD54L2Q9Y4B4 1467 aa10.69□□□□□ -0.7
PDGFC-203ENST00000502773 TIAM1Q13009 1591 aa10.68□□□□□ -0.7
PDGFC-203ENST00000502773 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
PDGFC-203ENST00000502773 FAM50AQ14320 339 aaKnown RBP10.67□□□□□ -0.7
PDGFC-203ENST00000502773 CCDC18Q5T9S5 1454 aa10.67□□□□□ -0.7
PDGFC-203ENST00000502773 GRIN2BQ13224 1484 aa10.67□□□□□ -0.7
PDGFC-203ENST00000502773 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
PDGFC-203ENST00000502773 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
PDGFC-203ENST00000502773 NESP48681 1621 aa10.66□□□□□ -0.7
PDGFC-203ENST00000502773 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
PDGFC-203ENST00000502773 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.71
PDGFC-203ENST00000502773 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.71
PDGFC-203ENST00000502773 ERCC6Q03468 1493 aa10.63□□□□□ -0.71
PDGFC-203ENST00000502773 CTTNBP2Q8WZ74 1663 aa10.63□□□□□ -0.71
PDGFC-203ENST00000502773 BCL11AQ9H165 835 aa10.63□□□□□ -0.71
PDGFC-203ENST00000502773 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
PDGFC-203ENST00000502773 ABCA5Q8WWZ7 1642 aa10.61□□□□□ -0.71
PDGFC-203ENST00000502773 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
PDGFC-203ENST00000502773 ITGAEP38570 1179 aa10.6□□□□□ -0.71
PDGFC-203ENST00000502773 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
PDGFC-203ENST00000502773 CARMIL2Q6F5E8 1435 aa10.59□□□□□ -0.71
PDGFC-203ENST00000502773 DHX57Q6P158 1386 aaKnown RBP10.58□□□□□ -0.72
PDGFC-203ENST00000502773 CFAP43Q8NDM7 1665 aa10.58□□□□□ -0.72
PDGFC-203ENST00000502773 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
PDGFC-203ENST00000502773 CHMP7Q8WUX9 453 aaPredicted RBP10.57□□□□□ -0.72
PDGFC-203ENST00000502773 SCAF1Q9H7N4 1312 aaKnown RBP10.56□□□□□ -0.72
PDGFC-203ENST00000502773 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
PDGFC-203ENST00000502773 KIAA0586Q9BVV6 1533 aa10.55□□□□□ -0.72
PDGFC-203ENST00000502773 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
PDGFC-203ENST00000502773 IQGAP2Q13576 1575 aa10.55□□□□□ -0.72
PDGFC-203ENST00000502773 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
PDGFC-203ENST00000502773 WDR62O43379 1518 aa10.54□□□□□ -0.72
PDGFC-203ENST00000502773 PCF11O94913 1555 aaKnown RBP10.54□□□□□ -0.72
PDGFC-203ENST00000502773 RAB3GAP2Q9H2M9 1393 aa10.54□□□□□ -0.72
PDGFC-203ENST00000502773 FGD6Q6ZV73 1430 aa10.53□□□□□ -0.72
PDGFC-203ENST00000502773 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
PDGFC-203ENST00000502773 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
PDGFC-203ENST00000502773 SAMD9Q5K651 1589 aa10.53□□□□□ -0.72
PDGFC-203ENST00000502773 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
PDGFC-203ENST00000502773 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
PDGFC-203ENST00000502773 SUPT6HQ7KZ85 1726 aaKnown RBP10.52□□□□□ -0.73
PDGFC-203ENST00000502773 ADAMTS12P58397 1594 aa10.5□□□□□ -0.73
PDGFC-203ENST00000502773 UGGT2Q9NYU1 1516 aa10.5□□□□□ -0.73
PDGFC-203ENST00000502773 PHLDB1Q86UU1 1377 aa10.5□□□□□ -0.73
PDGFC-203ENST00000502773 TONSLQ96HA7 1378 aa10.49□□□□□ -0.73
PDGFC-203ENST00000502773 YTHDC1Q96MU7 727 aaKnown RBP10.48□□□□□ -0.73
PDGFC-203ENST00000502773 PBRM1Q86U86 1689 aa10.48□□□□□ -0.73
PDGFC-203ENST00000502773 NCOA2Q15596 1464 aa10.48□□□□□ -0.73
PDGFC-203ENST00000502773 AKNAQ7Z591 1439 aa10.48□□□□□ -0.73
PDGFC-203ENST00000502773 SNAPC4Q5SXM2 1469 aa10.47□□□□□ -0.73
PDGFC-203ENST00000502773 SYNJ2O15056 1496 aa10.47□□□□□ -0.73
PDGFC-203ENST00000502773 PLEKHD1A6NEE1 506 aa10.46□□□□□ -0.74
PDGFC-203ENST00000502773 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
PDGFC-203ENST00000502773 UACAQ9BZF9 1416 aa10.45□□□□□ -0.74
PDGFC-203ENST00000502773 GRIN2AQ12879 1464 aa10.45□□□□□ -0.74
PDGFC-203ENST00000502773 RSPH4AQ5TD94 716 aa10.44□□□□□ -0.74
PDGFC-203ENST00000502773 TRIM52Q96A61 297 aa10.44□□□□□ -0.74
PDGFC-203ENST00000502773 FBLN2P98095 1184 aa10.44□□□□□ -0.74
PDGFC-203ENST00000502773 EPRSP07814 1512 aaKnown RBP10.43□□□□□ -0.74
PDGFC-203ENST00000502773 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
PDGFC-203ENST00000502773 ROCK1Q13464 1354 aa10.42□□□□□ -0.74
PDGFC-203ENST00000502773 TCOF1Q13428 1488 aaKnown RBP10.41□□□□□ -0.74
PDGFC-203ENST00000502773 JPH4Q96JJ6 628 aa10.41□□□□□ -0.74
PDGFC-203ENST00000502773 CFDP1Q9UEE9 299 aaPredicted RBP10.4□□□□□ -0.75
PDGFC-203ENST00000502773 TSPY4P0CV99 314 aa10.39□□□□□ -0.75
PDGFC-203ENST00000502773 TSPY10P0CW01 314 aa10.39□□□□□ -0.75
PDGFC-203ENST00000502773 ANP32CO43423 234 aa10.38□□□□□ -0.75
PDGFC-203ENST00000502773 TROQ12816 1431 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-203ENST00000502773 PPP1R15AO75807 674 aaPredicted RBP10.38□□□□□ -0.75
PDGFC-203ENST00000502773 PTPN23Q9H3S7 1636 aa10.38□□□□□ -0.75
PDGFC-203ENST00000502773 KIAA0556O60303 1618 aa10.37□□□□□ -0.75
PDGFC-203ENST00000502773 ANKRD30AQ9BXX3 1397 aa10.36□□□□□ -0.75
PDGFC-203ENST00000502773 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
PDGFC-203ENST00000502773 NUP160Q12769 1436 aa10.35□□□□□ -0.75
PDGFC-203ENST00000502773 RAPGEF6Q8TEU7 1601 aa10.35□□□□□ -0.75
PDGFC-203ENST00000502773 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
PDGFC-203ENST00000502773 NAIPQ13075 1403 aa10.33□□□□□ -0.76
PDGFC-203ENST00000502773 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
PDGFC-203ENST00000502773 MIER1Q8N108 512 aa10.33□□□□□ -0.76
PDGFC-203ENST00000502773 CCER2I3L3R5 266 aa10.33□□□□□ -0.76
PDGFC-203ENST00000502773 PTPRGP23470 1445 aa10.32□□□□□ -0.76
PDGFC-203ENST00000502773 ITSN2Q9NZM3 1697 aa10.32□□□□□ -0.76
PDGFC-203ENST00000502773 RRP7BPQ9NSQ0 103 aa10.31□□□□□ -0.76
PDGFC-203ENST00000502773 EIF4G2P78344 907 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDGFC-203ENST00000502773 DNAJC5BQ9UF47 199 aa10.31□□□□□ -0.76
PDGFC-203ENST00000502773 MPHOSPH9Q99550 1183 aa10.3□□□□□ -0.76
PDGFC-203ENST00000502773 SLC4A1APQ9BWU0 796 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms