RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
RTCB-206ENST00000498434 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
RTCB-206ENST00000498434 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
RTCB-206ENST00000498434 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
RTCB-206ENST00000498434 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
RTCB-206ENST00000498434 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
RTCB-206ENST00000498434 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
RTCB-206ENST00000498434 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
RTCB-206ENST00000498434 EEA1Q15075 1411 aa13.5□□□□□ -0.25
RTCB-206ENST00000498434 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
RTCB-206ENST00000498434 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
RTCB-206ENST00000498434 CLCN6P51797 869 aa13.48□□□□□ -0.25
RTCB-206ENST00000498434 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
RTCB-206ENST00000498434 CFTRP13569 1480 aa13.45□□□□□ -0.26
RTCB-206ENST00000498434 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
RTCB-206ENST00000498434 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
RTCB-206ENST00000498434 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
RTCB-206ENST00000498434 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
RTCB-206ENST00000498434 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
RTCB-206ENST00000498434 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
RTCB-206ENST00000498434 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
RTCB-206ENST00000498434 BIVM-ERCC5R4GMW8 1640 aa13.33□□□□□ -0.28
RTCB-206ENST00000498434 DCBLD2Q96PD2 775 aa13.33□□□□□ -0.28
RTCB-206ENST00000498434 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
RTCB-206ENST00000498434 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
RTCB-206ENST00000498434 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
RTCB-206ENST00000498434 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
RTCB-206ENST00000498434 SOGA1O94964 1423 aa13.26□□□□□ -0.29
RTCB-206ENST00000498434 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
RTCB-206ENST00000498434 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
RTCB-206ENST00000498434 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
RTCB-206ENST00000498434 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
RTCB-206ENST00000498434 CUX1P39880 1505 aa13.22□□□□□ -0.29
RTCB-206ENST00000498434 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.29
RTCB-206ENST00000498434 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
RTCB-206ENST00000498434 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
RTCB-206ENST00000498434 KIF21BO75037 1637 aa13.2□□□□□ -0.3
RTCB-206ENST00000498434 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
RTCB-206ENST00000498434 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
RTCB-206ENST00000498434 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
RTCB-206ENST00000498434 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
RTCB-206ENST00000498434 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
RTCB-206ENST00000498434 RUSC2Q8N2Y8 1516 aa13.13□□□□□ -0.31
RTCB-206ENST00000498434 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
RTCB-206ENST00000498434 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
RTCB-206ENST00000498434 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
RTCB-206ENST00000498434 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
RTCB-206ENST00000498434 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
RTCB-206ENST00000498434 NESP48681 1621 aa13.08□□□□□ -0.32
RTCB-206ENST00000498434 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
RTCB-206ENST00000498434 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
RTCB-206ENST00000498434 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
RTCB-206ENST00000498434 POTEMA6NI47 508 aa13.06□□□□□ -0.32
RTCB-206ENST00000498434 CUX2O14529 1486 aa13.05□□□□□ -0.32
RTCB-206ENST00000498434 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
RTCB-206ENST00000498434 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
RTCB-206ENST00000498434 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
RTCB-206ENST00000498434 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
RTCB-206ENST00000498434 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
RTCB-206ENST00000498434 CLIP1P30622 1438 aa12.99□□□□□ -0.33
RTCB-206ENST00000498434 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
RTCB-206ENST00000498434 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
RTCB-206ENST00000498434 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
RTCB-206ENST00000498434 IGF1RP08069 1367 aa12.98□□□□□ -0.33
RTCB-206ENST00000498434 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
RTCB-206ENST00000498434 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
RTCB-206ENST00000498434 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
RTCB-206ENST00000498434 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.33
RTCB-206ENST00000498434 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
RTCB-206ENST00000498434 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
RTCB-206ENST00000498434 CUL7Q14999 1698 aa12.95□□□□□ -0.34
RTCB-206ENST00000498434 WDR97A6NE52 1622 aa12.91□□□□□ -0.34
RTCB-206ENST00000498434 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
RTCB-206ENST00000498434 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
RTCB-206ENST00000498434 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
RTCB-206ENST00000498434 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
RTCB-206ENST00000498434 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
RTCB-206ENST00000498434 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
RTCB-206ENST00000498434 WDR62O43379 1518 aa12.87□□□□□ -0.35
RTCB-206ENST00000498434 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
RTCB-206ENST00000498434 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
RTCB-206ENST00000498434 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
RTCB-206ENST00000498434 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
RTCB-206ENST00000498434 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
RTCB-206ENST00000498434 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
RTCB-206ENST00000498434 SLC39A7Q92504 469 aa12.82□□□□□ -0.36
RTCB-206ENST00000498434 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
RTCB-206ENST00000498434 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
RTCB-206ENST00000498434 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
RTCB-206ENST00000498434 C7P10643 843 aa12.81□□□□□ -0.36
RTCB-206ENST00000498434 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
RTCB-206ENST00000498434 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
RTCB-206ENST00000498434 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
RTCB-206ENST00000498434 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
RTCB-206ENST00000498434 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
RTCB-206ENST00000498434 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
RTCB-206ENST00000498434 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
RTCB-206ENST00000498434 HRCP23327 699 aa12.76□□□□□ -0.37
RTCB-206ENST00000498434 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
RTCB-206ENST00000498434 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 316.7 ms