RNA–Protein interactions for RNA: ENST00000497610.1

C3orf52-207, Transcript of chromosome 3 open reading frame 52, humanhuman

TSL 3

Gene C3orf52, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf52-207ENST00000497610 UBTFP17480 764 aaKnown RBP13.38□□□□□ -0.27
C3orf52-207ENST00000497610 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
C3orf52-207ENST00000497610 CUX2O14529 1486 aa13.36□□□□□ -0.27
C3orf52-207ENST00000497610 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
C3orf52-207ENST00000497610 POLA1P09884 1462 aaPredicted RBP13.35□□□□□ -0.27
C3orf52-207ENST00000497610 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
C3orf52-207ENST00000497610 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
C3orf52-207ENST00000497610 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
C3orf52-207ENST00000497610 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
C3orf52-207ENST00000497610 CLIP1P30622 1438 aa13.32□□□□□ -0.28
C3orf52-207ENST00000497610 CUL7Q14999 1698 aa13.28□□□□□ -0.28
C3orf52-207ENST00000497610 APLP2Q06481 763 aa13.28□□□□□ -0.28
C3orf52-207ENST00000497610 IGF1RP08069 1367 aa13.28□□□□□ -0.28
C3orf52-207ENST00000497610 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
C3orf52-207ENST00000497610 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
C3orf52-207ENST00000497610 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
C3orf52-207ENST00000497610 HAX1O00165 279 aa13.25□□□□□ -0.29
C3orf52-207ENST00000497610 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
C3orf52-207ENST00000497610 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
C3orf52-207ENST00000497610 CARMIL1Q5VZK9 1371 aa13.23□□□□□ -0.29
C3orf52-207ENST00000497610 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.3
C3orf52-207ENST00000497610 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
C3orf52-207ENST00000497610 WDR62O43379 1518 aa13.19□□□□□ -0.3
C3orf52-207ENST00000497610 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
C3orf52-207ENST00000497610 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
C3orf52-207ENST00000497610 HRCP23327 699 aa13.17□□□□□ -0.3
C3orf52-207ENST00000497610 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
C3orf52-207ENST00000497610 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
C3orf52-207ENST00000497610 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
C3orf52-207ENST00000497610 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
C3orf52-207ENST00000497610 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
C3orf52-207ENST00000497610 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
C3orf52-207ENST00000497610 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
C3orf52-207ENST00000497610 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
C3orf52-207ENST00000497610 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.31
C3orf52-207ENST00000497610 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
C3orf52-207ENST00000497610 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
C3orf52-207ENST00000497610 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
C3orf52-207ENST00000497610 MAP3K1Q13233 1512 aa13.04□□□□□ -0.32
C3orf52-207ENST00000497610 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
C3orf52-207ENST00000497610 EVX2Q03828 476 aa13.02□□□□□ -0.33
C3orf52-207ENST00000497610 LHX8Q68G74 356 aa13.02□□□□□ -0.33
C3orf52-207ENST00000497610 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
C3orf52-207ENST00000497610 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
C3orf52-207ENST00000497610 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
C3orf52-207ENST00000497610 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
C3orf52-207ENST00000497610 EIF4G3O43432 1585 aaKnown RBP12.99□□□□□ -0.33
C3orf52-207ENST00000497610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
C3orf52-207ENST00000497610 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
C3orf52-207ENST00000497610 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
C3orf52-207ENST00000497610 CFAP43Q8NDM7 1665 aa12.98□□□□□ -0.33
C3orf52-207ENST00000497610 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
C3orf52-207ENST00000497610 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
C3orf52-207ENST00000497610 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
C3orf52-207ENST00000497610 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
C3orf52-207ENST00000497610 ZNF608Q9ULD9 1512 aaPredicted RBP12.96□□□□□ -0.33
C3orf52-207ENST00000497610 FMN1Q68DA7 1419 aa12.96□□□□□ -0.34
C3orf52-207ENST00000497610 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
C3orf52-207ENST00000497610 IQGAP2Q13576 1575 aa12.94□□□□□ -0.34
C3orf52-207ENST00000497610 CASKIN1Q8WXD9 1431 aa12.94□□□□□ -0.34
C3orf52-207ENST00000497610 FHOD3Q2V2M9 1422 aa12.93□□□□□ -0.34
C3orf52-207ENST00000497610 SNAPC4Q5SXM2 1469 aa12.92□□□□□ -0.34
C3orf52-207ENST00000497610 TTBK1Q5TCY1 1321 aaPredicted RBP12.91□□□□□ -0.34
C3orf52-207ENST00000497610 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
C3orf52-207ENST00000497610 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
C3orf52-207ENST00000497610 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
C3orf52-207ENST00000497610 UGGT2Q9NYU1 1516 aa12.89□□□□□ -0.35
C3orf52-207ENST00000497610 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
C3orf52-207ENST00000497610 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
C3orf52-207ENST00000497610 LRRC9Q6ZRR7 1453 aa12.88□□□□□ -0.35
C3orf52-207ENST00000497610 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
C3orf52-207ENST00000497610 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
C3orf52-207ENST00000497610 POLA2Q14181 598 aa12.86□□□□□ -0.35
C3orf52-207ENST00000497610 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
C3orf52-207ENST00000497610 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
C3orf52-207ENST00000497610 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
C3orf52-207ENST00000497610 KIAA0556O60303 1618 aa12.81□□□□□ -0.36
C3orf52-207ENST00000497610 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
C3orf52-207ENST00000497610 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
C3orf52-207ENST00000497610 NUP160Q12769 1436 aa12.8□□□□□ -0.36
C3orf52-207ENST00000497610 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
C3orf52-207ENST00000497610 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
C3orf52-207ENST00000497610 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
C3orf52-207ENST00000497610 LRRIQ1Q96JM4 1722 aa12.78□□□□□ -0.36
C3orf52-207ENST00000497610 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
C3orf52-207ENST00000497610 DISP1Q96F81 1524 aa12.77□□□□□ -0.37
C3orf52-207ENST00000497610 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
C3orf52-207ENST00000497610 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
C3orf52-207ENST00000497610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
C3orf52-207ENST00000497610 PHLDB1Q86UU1 1377 aa12.73□□□□□ -0.37
C3orf52-207ENST00000497610 MTUS2Q5JR59 1369 aa12.72□□□□□ -0.37
C3orf52-207ENST00000497610 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
C3orf52-207ENST00000497610 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.37
C3orf52-207ENST00000497610 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
C3orf52-207ENST00000497610 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
C3orf52-207ENST00000497610 ARHGEF11O15085 1522 aa12.7□□□□□ -0.38
C3orf52-207ENST00000497610 NCOA2Q15596 1464 aa12.68□□□□□ -0.38
C3orf52-207ENST00000497610 FGD6Q6ZV73 1430 aa12.68□□□□□ -0.38
C3orf52-207ENST00000497610 CHD1O14646 1710 aa12.68□□□□□ -0.38
C3orf52-207ENST00000497610 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms