RNA–Protein interactions for RNA: ENST00000497227.1

CARMIL1-204, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 3

Gene CARMIL1, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-204ENST00000497227 PDS5BQ9NTI5 1447 aa9.91□□□□□ -0.82
CARMIL1-204ENST00000497227 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
CARMIL1-204ENST00000497227 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
CARMIL1-204ENST00000497227 LHX8Q68G74 356 aa9.89□□□□□ -0.83
CARMIL1-204ENST00000497227 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
CARMIL1-204ENST00000497227 GABBR2O75899 941 aa9.88□□□□□ -0.83
CARMIL1-204ENST00000497227 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
CARMIL1-204ENST00000497227 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
CARMIL1-204ENST00000497227 MKRN4PQ13434 485 aaPredicted RBP9.82□□□□□ -0.84
CARMIL1-204ENST00000497227 CLEC11AQ9Y240 323 aa9.81□□□□□ -0.84
CARMIL1-204ENST00000497227 WDR62O43379 1518 aa9.81□□□□□ -0.84
CARMIL1-204ENST00000497227 SSUH2Q9Y2M2 353 aa9.76□□□□□ -0.85
CARMIL1-204ENST00000497227 WIZO95785 1651 aa9.75□□□□□ -0.85
CARMIL1-204ENST00000497227 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
CARMIL1-204ENST00000497227 CFTRP13569 1480 aa9.73□□□□□ -0.85
CARMIL1-204ENST00000497227 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
CARMIL1-204ENST00000497227 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
CARMIL1-204ENST00000497227 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
CARMIL1-204ENST00000497227 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
CARMIL1-204ENST00000497227 CLCN6P51797 869 aa9.68□□□□□ -0.86
CARMIL1-204ENST00000497227 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
CARMIL1-204ENST00000497227 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
CARMIL1-204ENST00000497227 ZNF608Q9ULD9 1512 aaPredicted RBP9.65□□□□□ -0.86
CARMIL1-204ENST00000497227 PRR29P0C7W0 189 aa9.63□□□□□ -0.87
CARMIL1-204ENST00000497227 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
CARMIL1-204ENST00000497227 RIMBP3CA6NJZ7 1639 aa9.63□□□□□ -0.87
CARMIL1-204ENST00000497227 RIMBP3BA6NNM3 1639 aa9.63□□□□□ -0.87
CARMIL1-204ENST00000497227 RIMBP3Q9UFD9 1639 aa9.63□□□□□ -0.87
CARMIL1-204ENST00000497227 SPDYE4A6NLX3 237 aa9.61□□□□□ -0.87
CARMIL1-204ENST00000497227 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
CARMIL1-204ENST00000497227 TOP2AP11388 1531 aaKnown RBP9.57□□□□□ -0.88
CARMIL1-204ENST00000497227 CCDC88BA6NC98 1476 aa9.57□□□□□ -0.88
CARMIL1-204ENST00000497227 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
CARMIL1-204ENST00000497227 CD44P16070 742 aaKnown RBP9.56□□□□□ -0.88
CARMIL1-204ENST00000497227 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.88
CARMIL1-204ENST00000497227 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
CARMIL1-204ENST00000497227 FARP1Q9Y4F1 1045 aaPredicted RBP9.54□□□□□ -0.88
CARMIL1-204ENST00000497227 TOPBP1Q92547 1522 aa9.54□□□□□ -0.88
CARMIL1-204ENST00000497227 ARAP1Q96P48 1450 aa9.52□□□□□ -0.89
CARMIL1-204ENST00000497227 DCBLD2Q96PD2 775 aa9.49□□□□□ -0.89
CARMIL1-204ENST00000497227 TARBP1Q13395 1621 aaKnown RBP9.47□□□□□ -0.89
CARMIL1-204ENST00000497227 TDRD9Q8NDG6 1382 aaKnown RBP9.47□□□□□ -0.89
CARMIL1-204ENST00000497227 RAD54L2Q9Y4B4 1467 aa9.46□□□□□ -0.9
CARMIL1-204ENST00000497227 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.9
CARMIL1-204ENST00000497227 ABCC8Q09428 1581 aa9.46□□□□□ -0.9
CARMIL1-204ENST00000497227 FKBP8Q14318 412 aa9.44□□□□□ -0.9
CARMIL1-204ENST00000497227 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
CARMIL1-204ENST00000497227 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
CARMIL1-204ENST00000497227 POLA1P09884 1462 aaPredicted RBP9.44□□□□□ -0.9
CARMIL1-204ENST00000497227 PRDM2Q13029 1718 aa9.43□□□□□ -0.9
CARMIL1-204ENST00000497227 DNMBPQ6XZF7 1577 aa9.43□□□□□ -0.9
CARMIL1-204ENST00000497227 CHD1O14646 1710 aa9.42□□□□□ -0.9
CARMIL1-204ENST00000497227 SOGA1O94964 1423 aa9.41□□□□□ -0.9
CARMIL1-204ENST00000497227 TTBK1Q5TCY1 1321 aaPredicted RBP9.4□□□□□ -0.9
CARMIL1-204ENST00000497227 MYT1Q01538 1121 aa9.39□□□□□ -0.91
CARMIL1-204ENST00000497227 CHMP7Q8WUX9 453 aaPredicted RBP9.39□□□□□ -0.91
CARMIL1-204ENST00000497227 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
CARMIL1-204ENST00000497227 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
CARMIL1-204ENST00000497227 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
CARMIL1-204ENST00000497227 SNAPC4Q5SXM2 1469 aa9.35□□□□□ -0.91
CARMIL1-204ENST00000497227 PROM2Q8N271 834 aa9.33□□□□□ -0.92
CARMIL1-204ENST00000497227 FGD5Q6ZNL6 1462 aa9.33□□□□□ -0.92
CARMIL1-204ENST00000497227 CUX1P39880 1505 aa9.32□□□□□ -0.92
CARMIL1-204ENST00000497227 POTEB2H3BUK9 544 aa9.31□□□□□ -0.92
CARMIL1-204ENST00000497227 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
CARMIL1-204ENST00000497227 SYNJ2O15056 1496 aa9.3□□□□□ -0.92
CARMIL1-204ENST00000497227 GAPVD1Q14C86 1478 aa9.3□□□□□ -0.92
CARMIL1-204ENST00000497227 MAGI1Q96QZ7 1491 aaPredicted RBP9.3□□□□□ -0.92
CARMIL1-204ENST00000497227 POTEMA6NI47 508 aa9.3□□□□□ -0.92
CARMIL1-204ENST00000497227 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
CARMIL1-204ENST00000497227 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
CARMIL1-204ENST00000497227 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
CARMIL1-204ENST00000497227 ERCC6L2Q5T890 1561 aa9.28□□□□□ -0.92
CARMIL1-204ENST00000497227 SYNJ1O43426 1573 aa9.27□□□□□ -0.93
CARMIL1-204ENST00000497227 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
CARMIL1-204ENST00000497227 WDR97A6NE52 1622 aa9.25□□□□□ -0.93
CARMIL1-204ENST00000497227 DAXXQ9UER7 740 aaPredicted RBP9.25□□□□□ -0.93
CARMIL1-204ENST00000497227 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
CARMIL1-204ENST00000497227 ABCA10Q8WWZ4 1543 aa9.22□□□□□ -0.93
CARMIL1-204ENST00000497227 PAK3O75914 559 aaPredicted RBP9.21□□□□□ -0.94
CARMIL1-204ENST00000497227 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
CARMIL1-204ENST00000497227 NUP160Q12769 1436 aa9.21□□□□□ -0.94
CARMIL1-204ENST00000497227 PELP1Q8IZL8 1130 aaKnown RBP9.19□□□□□ -0.94
CARMIL1-204ENST00000497227 GRIN2AQ12879 1464 aa9.19□□□□□ -0.94
CARMIL1-204ENST00000497227 CEP170Q5SW79 1584 aa9.18□□□□□ -0.94
CARMIL1-204ENST00000497227 ABCA5Q8WWZ7 1642 aa9.17□□□□□ -0.94
CARMIL1-204ENST00000497227 KDM4FA0A1W2PPD8 638 aa9.17□□□□□ -0.94
CARMIL1-204ENST00000497227 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
CARMIL1-204ENST00000497227 MIER1Q8N108 512 aa9.16□□□□□ -0.94
CARMIL1-204ENST00000497227 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
CARMIL1-204ENST00000497227 PHF12Q96QT6 1004 aa9.16□□□□□ -0.94
CARMIL1-204ENST00000497227 PBRM1Q86U86 1689 aa9.16□□□□□ -0.94
CARMIL1-204ENST00000497227 SHROOM2Q13796 1616 aa9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 NPM1P06748 294 aaKnown RBP eCLIP9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 C7P10643 843 aa9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 ASTLQ6HA08 431 aaPredicted RBP9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
CARMIL1-204ENST00000497227 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms