RNA–Protein interactions for RNA: ENST00000497227.1

CARMIL1-204, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 3

Gene CARMIL1, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-204ENST00000497227 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
CARMIL1-204ENST00000497227 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
CARMIL1-204ENST00000497227 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
CARMIL1-204ENST00000497227 PHF23Q9BUL5 403 aaPredicted RBP15.91■□□□□ 0.14
CARMIL1-204ENST00000497227 FOXD1Q16676 465 aa15.12■□□□□ 0.01
CARMIL1-204ENST00000497227 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
CARMIL1-204ENST00000497227 MSH5O43196 834 aa14.36□□□□□ -0.11
CARMIL1-204ENST00000497227 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
CARMIL1-204ENST00000497227 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
CARMIL1-204ENST00000497227 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
CARMIL1-204ENST00000497227 ADRA2BP18089 450 aa13.68□□□□□ -0.22
CARMIL1-204ENST00000497227 NISCHQ9Y2I1 1504 aa12.86□□□□□ -0.35
CARMIL1-204ENST00000497227 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
CARMIL1-204ENST00000497227 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
CARMIL1-204ENST00000497227 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
CARMIL1-204ENST00000497227 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
CARMIL1-204ENST00000497227 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
CARMIL1-204ENST00000497227 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
CARMIL1-204ENST00000497227 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
CARMIL1-204ENST00000497227 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
CARMIL1-204ENST00000497227 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
CARMIL1-204ENST00000497227 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
CARMIL1-204ENST00000497227 DNAJC5BQ9UF47 199 aa11.92□□□□□ -0.5
CARMIL1-204ENST00000497227 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
CARMIL1-204ENST00000497227 ABCC9O60706 1549 aa11.83□□□□□ -0.52
CARMIL1-204ENST00000497227 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
CARMIL1-204ENST00000497227 KCNA4P22459 653 aa11.5□□□□□ -0.57
CARMIL1-204ENST00000497227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
CARMIL1-204ENST00000497227 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
CARMIL1-204ENST00000497227 POTEHQ6S545 545 aa11.47□□□□□ -0.57
CARMIL1-204ENST00000497227 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
CARMIL1-204ENST00000497227 DSG3P32926 999 aa11.26□□□□□ -0.61
CARMIL1-204ENST00000497227 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
CARMIL1-204ENST00000497227 CAPN15O75808 1086 aa11.16□□□□□ -0.62
CARMIL1-204ENST00000497227 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
CARMIL1-204ENST00000497227 PABPN1Q86U42 306 aaKnown RBP eCLIP11.08□□□□□ -0.64
CARMIL1-204ENST00000497227 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
CARMIL1-204ENST00000497227 DCAF8L2P0C7V8 631 aa10.99□□□□□ -0.65
CARMIL1-204ENST00000497227 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
CARMIL1-204ENST00000497227 NACADO15069 1562 aa10.98□□□□□ -0.65
CARMIL1-204ENST00000497227 APLP2Q06481 763 aa10.93□□□□□ -0.66
CARMIL1-204ENST00000497227 ZNF219Q9P2Y4 722 aaPredicted RBP10.89□□□□□ -0.67
CARMIL1-204ENST00000497227 BICRAQ9NZM4 1560 aa10.88□□□□□ -0.67
CARMIL1-204ENST00000497227 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
CARMIL1-204ENST00000497227 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
CARMIL1-204ENST00000497227 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
CARMIL1-204ENST00000497227 ABCB7O75027 752 aa10.83□□□□□ -0.68
CARMIL1-204ENST00000497227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.8□□□□□ -0.68
CARMIL1-204ENST00000497227 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
CARMIL1-204ENST00000497227 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
CARMIL1-204ENST00000497227 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
CARMIL1-204ENST00000497227 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
CARMIL1-204ENST00000497227 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
CARMIL1-204ENST00000497227 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
CARMIL1-204ENST00000497227 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
CARMIL1-204ENST00000497227 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
CARMIL1-204ENST00000497227 CC2D2AQ9P2K1 1620 aa10.64□□□□□ -0.71
CARMIL1-204ENST00000497227 DNAJC5Q9H3Z4 198 aa10.63□□□□□ -0.71
CARMIL1-204ENST00000497227 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
CARMIL1-204ENST00000497227 ZCCHC6Q5VYS8 1495 aaKnown RBP10.57□□□□□ -0.72
CARMIL1-204ENST00000497227 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
CARMIL1-204ENST00000497227 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
CARMIL1-204ENST00000497227 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
CARMIL1-204ENST00000497227 ZBTB22O15209 634 aa10.51□□□□□ -0.73
CARMIL1-204ENST00000497227 POLA2Q14181 598 aa10.51□□□□□ -0.73
CARMIL1-204ENST00000497227 SCRIBQ14160 1630 aa10.51□□□□□ -0.73
CARMIL1-204ENST00000497227 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
CARMIL1-204ENST00000497227 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
CARMIL1-204ENST00000497227 ATXN8OSP0DMR3 200 aa10.33□□□□□ -0.76
CARMIL1-204ENST00000497227 PIP4P2Q8N4L2 257 aa10.33□□□□□ -0.76
CARMIL1-204ENST00000497227 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
CARMIL1-204ENST00000497227 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
CARMIL1-204ENST00000497227 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
CARMIL1-204ENST00000497227 ATF5Q9Y2D1 282 aaPredicted RBP10.26□□□□□ -0.77
CARMIL1-204ENST00000497227 HAX1O00165 279 aa10.25□□□□□ -0.77
CARMIL1-204ENST00000497227 FXR2P51116 673 aaKnown RBP eCLIP10.24□□□□□ -0.77
CARMIL1-204ENST00000497227 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
CARMIL1-204ENST00000497227 CUX2O14529 1486 aa10.23□□□□□ -0.77
CARMIL1-204ENST00000497227 PITPNM1O00562 1244 aa10.18□□□□□ -0.78
CARMIL1-204ENST00000497227 ATAD2BQ9ULI0 1458 aa10.16□□□□□ -0.78
CARMIL1-204ENST00000497227 NESP48681 1621 aa10.15□□□□□ -0.79
CARMIL1-204ENST00000497227 ERCC6Q03468 1493 aa10.14□□□□□ -0.79
CARMIL1-204ENST00000497227 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
CARMIL1-204ENST00000497227 EVX2Q03828 476 aa10.09□□□□□ -0.79
CARMIL1-204ENST00000497227 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
CARMIL1-204ENST00000497227 FBLN2P98095 1184 aa10.02□□□□□ -0.81
CARMIL1-204ENST00000497227 SMARCA4P51532 1647 aa10.02□□□□□ -0.81
CARMIL1-204ENST00000497227 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
CARMIL1-204ENST00000497227 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
CARMIL1-204ENST00000497227 THOC2Q8NI27 1593 aaKnown RBP9.98□□□□□ -0.81
CARMIL1-204ENST00000497227 BAZ1BQ9UIG0 1483 aaKnown RBP9.97□□□□□ -0.81
CARMIL1-204ENST00000497227 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
CARMIL1-204ENST00000497227 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
CARMIL1-204ENST00000497227 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
CARMIL1-204ENST00000497227 PEG3Q9GZU2 1588 aa9.94□□□□□ -0.82
CARMIL1-204ENST00000497227 MROH2BQ7Z745 1585 aa9.93□□□□□ -0.82
CARMIL1-204ENST00000497227 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
CARMIL1-204ENST00000497227 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
CARMIL1-204ENST00000497227 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
CARMIL1-204ENST00000497227 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms