RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 CAPN15O75808 1086 aa10.55□□□□□ -0.72
HMGCL-206ENST00000496907 ERCC6L2Q5T890 1561 aa10.54□□□□□ -0.72
HMGCL-206ENST00000496907 HECW2Q9P2P5 1572 aa10.53□□□□□ -0.72
HMGCL-206ENST00000496907 CLASP1Q7Z460 1538 aa10.49□□□□□ -0.73
HMGCL-206ENST00000496907 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
HMGCL-206ENST00000496907 POLA1P09884 1462 aaPredicted RBP10.49□□□□□ -0.73
HMGCL-206ENST00000496907 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
HMGCL-206ENST00000496907 SNAPC4Q5SXM2 1469 aa10.48□□□□□ -0.73
HMGCL-206ENST00000496907 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
HMGCL-206ENST00000496907 DISP3Q9P2K9 1392 aa10.47□□□□□ -0.73
HMGCL-206ENST00000496907 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.73
HMGCL-206ENST00000496907 RAD54L2Q9Y4B4 1467 aa10.46□□□□□ -0.74
HMGCL-206ENST00000496907 GAPVD1Q14C86 1478 aa10.44□□□□□ -0.74
HMGCL-206ENST00000496907 KIF13AQ9H1H9 1805 aa10.43□□□□□ -0.74
HMGCL-206ENST00000496907 SOGA1O94964 1423 aa10.42□□□□□ -0.74
HMGCL-206ENST00000496907 SYNJ2O15056 1496 aa10.42□□□□□ -0.74
HMGCL-206ENST00000496907 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
HMGCL-206ENST00000496907 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
HMGCL-206ENST00000496907 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
HMGCL-206ENST00000496907 ADGRL1O94910 1474 aa10.38□□□□□ -0.75
HMGCL-206ENST00000496907 GRIN2BQ13224 1484 aa10.38□□□□□ -0.75
HMGCL-206ENST00000496907 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
HMGCL-206ENST00000496907 PBRM1Q86U86 1689 aa10.37□□□□□ -0.75
HMGCL-206ENST00000496907 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
HMGCL-206ENST00000496907 KDM6BO15054 1643 aa10.35□□□□□ -0.75
HMGCL-206ENST00000496907 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
HMGCL-206ENST00000496907 KCNA4P22459 653 aa10.31□□□□□ -0.76
HMGCL-206ENST00000496907 CUX1P39880 1505 aa10.31□□□□□ -0.76
HMGCL-206ENST00000496907 WRNQ14191 1432 aaPredicted RBP eCLIP10.31□□□□□ -0.76
HMGCL-206ENST00000496907 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
HMGCL-206ENST00000496907 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
HMGCL-206ENST00000496907 GRIN2AQ12879 1464 aa10.26□□□□□ -0.77
HMGCL-206ENST00000496907 TSPOAP1O95153 1857 aa10.25□□□□□ -0.77
HMGCL-206ENST00000496907 ABCB7O75027 752 aa10.25□□□□□ -0.77
HMGCL-206ENST00000496907 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
HMGCL-206ENST00000496907 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
HMGCL-206ENST00000496907 ABCC10Q5T3U5 1492 aa10.22□□□□□ -0.77
HMGCL-206ENST00000496907 ABCA10Q8WWZ4 1543 aa10.22□□□□□ -0.77
HMGCL-206ENST00000496907 SPATA31D1Q6ZQQ2 1576 aa10.22□□□□□ -0.77
HMGCL-206ENST00000496907 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
HMGCL-206ENST00000496907 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
HMGCL-206ENST00000496907 NUP160Q12769 1436 aa10.2□□□□□ -0.78
HMGCL-206ENST00000496907 DIP2BQ9P265 1576 aa10.18□□□□□ -0.78
HMGCL-206ENST00000496907 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
HMGCL-206ENST00000496907 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
HMGCL-206ENST00000496907 NPM1P06748 294 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMGCL-206ENST00000496907 FHAD1B1AJZ9 1412 aa10.15□□□□□ -0.79
HMGCL-206ENST00000496907 MAPKBP1O60336 1514 aa10.14□□□□□ -0.79
HMGCL-206ENST00000496907 KIF27Q86VH2 1401 aa10.13□□□□□ -0.79
HMGCL-206ENST00000496907 HAX1O00165 279 aa10.12□□□□□ -0.79
HMGCL-206ENST00000496907 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
HMGCL-206ENST00000496907 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
HMGCL-206ENST00000496907 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
HMGCL-206ENST00000496907 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
HMGCL-206ENST00000496907 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
HMGCL-206ENST00000496907 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
HMGCL-206ENST00000496907 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
HMGCL-206ENST00000496907 EEA1Q15075 1411 aa10.07□□□□□ -0.8
HMGCL-206ENST00000496907 IGF1RP08069 1367 aa10.05□□□□□ -0.8
HMGCL-206ENST00000496907 LHX8Q68G74 356 aa10.04□□□□□ -0.8
HMGCL-206ENST00000496907 COL17A1Q9UMD9 1497 aaPredicted RBP10.04□□□□□ -0.8
HMGCL-206ENST00000496907 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
HMGCL-206ENST00000496907 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
HMGCL-206ENST00000496907 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-206ENST00000496907 EVX2Q03828 476 aa10.01□□□□□ -0.81
HMGCL-206ENST00000496907 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
HMGCL-206ENST00000496907 CARMIL1Q5VZK9 1371 aa10.01□□□□□ -0.81
HMGCL-206ENST00000496907 PPRC1Q5VV67 1664 aaKnown RBP9.99□□□□□ -0.81
HMGCL-206ENST00000496907 HSPA2P54652 639 aa9.98□□□□□ -0.81
HMGCL-206ENST00000496907 KIAA0586Q9BVV6 1533 aa9.97□□□□□ -0.81
HMGCL-206ENST00000496907 PTPRGP23470 1445 aa9.96□□□□□ -0.82
HMGCL-206ENST00000496907 ASXL2Q76L83 1435 aa9.96□□□□□ -0.82
HMGCL-206ENST00000496907 CUL7Q14999 1698 aa9.96□□□□□ -0.82
HMGCL-206ENST00000496907 ABCC2Q92887 1545 aa9.95□□□□□ -0.82
HMGCL-206ENST00000496907 GLI2P10070 1586 aa9.95□□□□□ -0.82
HMGCL-206ENST00000496907 PCF11O94913 1555 aaKnown RBP9.94□□□□□ -0.82
HMGCL-206ENST00000496907 PLB1Q6P1J6 1458 aa9.94□□□□□ -0.82
HMGCL-206ENST00000496907 RAPGEF2Q9Y4G8 1499 aa9.94□□□□□ -0.82
HMGCL-206ENST00000496907 FAM9AQ8IZU1 332 aaPredicted RBP9.93□□□□□ -0.82
HMGCL-206ENST00000496907 PTPRMP28827 1452 aa9.92□□□□□ -0.82
HMGCL-206ENST00000496907 TEX14Q8IWB6 1497 aa9.91□□□□□ -0.82
HMGCL-206ENST00000496907 MAP3K4Q9Y6R4 1608 aa9.91□□□□□ -0.82
HMGCL-206ENST00000496907 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
HMGCL-206ENST00000496907 CARMIL2Q6F5E8 1435 aa9.9□□□□□ -0.82
HMGCL-206ENST00000496907 KIF21BO75037 1637 aa9.9□□□□□ -0.82
HMGCL-206ENST00000496907 TNIKQ9UKE5 1360 aa9.89□□□□□ -0.83
HMGCL-206ENST00000496907 EPRSP07814 1512 aaKnown RBP9.88□□□□□ -0.83
HMGCL-206ENST00000496907 UHRF1BP1LA0JNW5 1464 aa9.86□□□□□ -0.83
HMGCL-206ENST00000496907 ZCCHC11Q5TAX3 1644 aaKnown RBP9.86□□□□□ -0.83
HMGCL-206ENST00000496907 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
HMGCL-206ENST00000496907 IQGAP2Q13576 1575 aa9.86□□□□□ -0.83
HMGCL-206ENST00000496907 UACAQ9BZF9 1416 aa9.86□□□□□ -0.83
HMGCL-206ENST00000496907 KDM5BQ9UGL1 1544 aa9.83□□□□□ -0.84
HMGCL-206ENST00000496907 APLP2Q06481 763 aa9.82□□□□□ -0.84
HMGCL-206ENST00000496907 GOLGA3Q08378 1498 aa9.81□□□□□ -0.84
HMGCL-206ENST00000496907 WDR7Q9Y4E6 1490 aa9.81□□□□□ -0.84
HMGCL-206ENST00000496907 DISP1Q96F81 1524 aa9.81□□□□□ -0.84
HMGCL-206ENST00000496907 ADAMTSL3P82987 1691 aa9.8□□□□□ -0.84
HMGCL-206ENST00000496907 CFAP43Q8NDM7 1665 aa9.8□□□□□ -0.84
HMGCL-206ENST00000496907 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms