RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
LYSMD4-209ENST00000496108 FKBP8Q14318 412 aa29.16■■■□□ 2.26
LYSMD4-209ENST00000496108 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
LYSMD4-209ENST00000496108 ITGAEP38570 1179 aa29.13■■■□□ 2.25
LYSMD4-209ENST00000496108 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
LYSMD4-209ENST00000496108 PPP1R15AO75807 674 aaPredicted RBP29.11■■■□□ 2.25
LYSMD4-209ENST00000496108 CCER2I3L3R5 266 aa29.1■■■□□ 2.25
LYSMD4-209ENST00000496108 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
LYSMD4-209ENST00000496108 DDX10Q13206 875 aaKnown RBP29.08■■■□□ 2.25
LYSMD4-209ENST00000496108 BCANQ96GW7 911 aa29.08■■■□□ 2.25
LYSMD4-209ENST00000496108 LRRC9Q6ZRR7 1453 aa29.08■■■□□ 2.25
LYSMD4-209ENST00000496108 NEFLP07196 543 aa29.07■■■□□ 2.24
LYSMD4-209ENST00000496108 CFTRP13569 1480 aa29.01■■■□□ 2.23
LYSMD4-209ENST00000496108 PHLDB1Q86UU1 1377 aa28.99■■■□□ 2.23
LYSMD4-209ENST00000496108 RBM19Q9Y4C8 960 aaKnown RBP28.98■■■□□ 2.23
LYSMD4-209ENST00000496108 KIF21AQ7Z4S6 1674 aa28.98■■■□□ 2.23
LYSMD4-209ENST00000496108 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
LYSMD4-209ENST00000496108 BCL11AQ9H165 835 aa28.97■■■□□ 2.23
LYSMD4-209ENST00000496108 CFAP43Q8NDM7 1665 aa28.96■■■□□ 2.23
LYSMD4-209ENST00000496108 SIN3AQ96ST3 1273 aa28.95■■■□□ 2.22
LYSMD4-209ENST00000496108 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
LYSMD4-209ENST00000496108 IGF1RP08069 1367 aa28.93■■■□□ 2.22
LYSMD4-209ENST00000496108 ANP32CO43423 234 aa28.93■■■□□ 2.22
LYSMD4-209ENST00000496108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.9■■■□□ 2.22
LYSMD4-209ENST00000496108 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
LYSMD4-209ENST00000496108 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
LYSMD4-209ENST00000496108 CARMIL1Q5VZK9 1371 aa28.82■■■□□ 2.2
LYSMD4-209ENST00000496108 THOC2Q8NI27 1593 aaKnown RBP28.81■■■□□ 2.2
LYSMD4-209ENST00000496108 PCF11O94913 1555 aaKnown RBP28.81■■■□□ 2.2
LYSMD4-209ENST00000496108 TRIM52Q96A61 297 aa28.81■■■□□ 2.2
LYSMD4-209ENST00000496108 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
LYSMD4-209ENST00000496108 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
LYSMD4-209ENST00000496108 AQRO60306 1485 aaKnown RBP eCLIP28.69■■■□□ 2.18
LYSMD4-209ENST00000496108 TONSLQ96HA7 1378 aa28.69■■■□□ 2.18
LYSMD4-209ENST00000496108 FANCIQ9NVI1 1328 aa28.69■■■□□ 2.18
LYSMD4-209ENST00000496108 MRC2Q9UBG0 1479 aa28.69■■■□□ 2.18
LYSMD4-209ENST00000496108 HIRIP3Q9BW71 556 aaPredicted RBP28.67■■■□□ 2.18
LYSMD4-209ENST00000496108 FGD5Q6ZNL6 1462 aa28.67■■■□□ 2.18
LYSMD4-209ENST00000496108 EFCAB5A4FU69 1503 aa28.65■■■□□ 2.18
LYSMD4-209ENST00000496108 CASKIN1Q8WXD9 1431 aa28.65■■■□□ 2.18
LYSMD4-209ENST00000496108 UACAQ9BZF9 1416 aa28.62■■■□□ 2.17
LYSMD4-209ENST00000496108 MSH5O43196 834 aa28.62■■■□□ 2.17
LYSMD4-209ENST00000496108 CCDC18Q5T9S5 1454 aa28.61■■■□□ 2.17
LYSMD4-209ENST00000496108 HFM1A2PYH4 1435 aa28.59■■■□□ 2.17
LYSMD4-209ENST00000496108 FGD6Q6ZV73 1430 aa28.59■■■□□ 2.17
LYSMD4-209ENST00000496108 WDR62O43379 1518 aa28.59■■■□□ 2.17
LYSMD4-209ENST00000496108 ERICH6BQ5W0A0 696 aa28.59■■■□□ 2.17
LYSMD4-209ENST00000496108 CDK11AQ9UQ88 783 aaPredicted RBP28.55■■■□□ 2.16
LYSMD4-209ENST00000496108 FHOD3Q2V2M9 1422 aa28.54■■■□□ 2.16
LYSMD4-209ENST00000496108 PTPN23Q9H3S7 1636 aa28.53■■■□□ 2.16
LYSMD4-209ENST00000496108 KDM5BQ9UGL1 1544 aa28.52■■■□□ 2.16
LYSMD4-209ENST00000496108 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
LYSMD4-209ENST00000496108 HNRNPUQ00839 825 aaKnown RBP eCLIP28.5■■■□□ 2.15
LYSMD4-209ENST00000496108 FMN1Q68DA7 1419 aa28.46■■■□□ 2.15
LYSMD4-209ENST00000496108 P3H3Q8IVL6 736 aa28.45■■■□□ 2.15
LYSMD4-209ENST00000496108 ATP1B4Q9UN42 357 aaPredicted RBP28.45■■■□□ 2.14
LYSMD4-209ENST00000496108 PTPRKQ15262 1439 aa28.44■■■□□ 2.14
LYSMD4-209ENST00000496108 NAIPQ13075 1403 aa28.43■■■□□ 2.14
LYSMD4-209ENST00000496108 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
LYSMD4-209ENST00000496108 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
LYSMD4-209ENST00000496108 NCOA2Q15596 1464 aa28.4■■■□□ 2.14
LYSMD4-209ENST00000496108 ERICH6Q7L0X2 663 aa28.39■■■□□ 2.14
LYSMD4-209ENST00000496108 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
LYSMD4-209ENST00000496108 CUL7Q14999 1698 aa28.38■■■□□ 2.13
LYSMD4-209ENST00000496108 PPP4R2Q9NY27 417 aa28.38■■■□□ 2.13
LYSMD4-209ENST00000496108 ABCA10Q8WWZ4 1543 aa28.36■■■□□ 2.13
LYSMD4-209ENST00000496108 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
LYSMD4-209ENST00000496108 MTUS2Q5JR59 1369 aa28.35■■■□□ 2.13
LYSMD4-209ENST00000496108 DNMBPQ6XZF7 1577 aa28.34■■■□□ 2.13
LYSMD4-209ENST00000496108 WASHC2AQ641Q2 1341 aa28.34■■■□□ 2.13
LYSMD4-209ENST00000496108 MYOM3Q5VTT5 1437 aa28.34■■■□□ 2.13
LYSMD4-209ENST00000496108 CNTLNQ9NXG0 1405 aa28.31■■■□□ 2.12
LYSMD4-209ENST00000496108 IRX6P78412 446 aaPredicted RBP28.31■■■□□ 2.12
LYSMD4-209ENST00000496108 HSPA5P11021 654 aaKnown RBP28.28■■■□□ 2.12
LYSMD4-209ENST00000496108 HECW1Q76N89 1606 aa28.26■■■□□ 2.11
LYSMD4-209ENST00000496108 SUPT6HQ7KZ85 1726 aaKnown RBP28.25■■■□□ 2.11
LYSMD4-209ENST00000496108 EHBP1L1Q8N3D4 1523 aa28.24■■■□□ 2.11
LYSMD4-209ENST00000496108 SAMD9Q5K651 1589 aa28.24■■■□□ 2.11
LYSMD4-209ENST00000496108 EIF4G2P78344 907 aaKnown RBP eCLIP28.22■■■□□ 2.11
LYSMD4-209ENST00000496108 GCC2Q8IWJ2 1684 aa28.22■■■□□ 2.11
LYSMD4-209ENST00000496108 AKNAQ7Z591 1439 aa28.21■■■□□ 2.11
LYSMD4-209ENST00000496108 GRIN2BQ13224 1484 aa28.21■■■□□ 2.11
LYSMD4-209ENST00000496108 ZBED9Q6R2W3 1325 aa28.2■■■□□ 2.1
LYSMD4-209ENST00000496108 LRRIQ1Q96JM4 1722 aa28.2■■■□□ 2.1
LYSMD4-209ENST00000496108 ARHGEF11O15085 1522 aa28.19■■■□□ 2.1
LYSMD4-209ENST00000496108 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
LYSMD4-209ENST00000496108 UGGT2Q9NYU1 1516 aa28.18■■■□□ 2.1
LYSMD4-209ENST00000496108 DENND4BO75064 1496 aaPredicted RBP28.18■■■□□ 2.1
LYSMD4-209ENST00000496108 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
LYSMD4-209ENST00000496108 NCOA1Q15788 1441 aa28.18■■■□□ 2.1
LYSMD4-209ENST00000496108 TCOF1Q13428 1488 aaKnown RBP28.17■■■□□ 2.1
LYSMD4-209ENST00000496108 PRKRIP1Q9H875 184 aaPredicted RBP28.15■■■□□ 2.1
LYSMD4-209ENST00000496108 CCDC7Q96M83 1385 aa28.13■■■□□ 2.09
LYSMD4-209ENST00000496108 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
LYSMD4-209ENST00000496108 CCDC184Q52MB2 194 aa28.11■■■□□ 2.09
LYSMD4-209ENST00000496108 TARBP1Q13395 1621 aaKnown RBP28.05■■■□□ 2.08
LYSMD4-209ENST00000496108 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
LYSMD4-209ENST00000496108 MRS2Q9HD23 443 aa28.05■■■□□ 2.08
LYSMD4-209ENST00000496108 B4GALNT3Q6L9W6 998 aa28.04■■■□□ 2.08
LYSMD4-209ENST00000496108 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms