RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 TRIM41Q8WV44 630 aa9.15□□□□□ -0.94
SRPRB-205ENST00000494297 SNAPC4Q5SXM2 1469 aa9.15□□□□□ -0.95
SRPRB-205ENST00000494297 CHMP7Q8WUX9 453 aaPredicted RBP9.13□□□□□ -0.95
SRPRB-205ENST00000494297 KIF27Q86VH2 1401 aa9.13□□□□□ -0.95
SRPRB-205ENST00000494297 ERICH3Q5RHP9 1530 aa9.12□□□□□ -0.95
SRPRB-205ENST00000494297 FBLN2P98095 1184 aa9.12□□□□□ -0.95
SRPRB-205ENST00000494297 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
SRPRB-205ENST00000494297 IGF1RP08069 1367 aa9.12□□□□□ -0.95
SRPRB-205ENST00000494297 FHAD1B1AJZ9 1412 aa9.1□□□□□ -0.95
SRPRB-205ENST00000494297 PBRM1Q86U86 1689 aa9.1□□□□□ -0.95
SRPRB-205ENST00000494297 CHD1O14646 1710 aa9.05□□□□□ -0.96
SRPRB-205ENST00000494297 ADAMTS12P58397 1594 aa9.05□□□□□ -0.96
SRPRB-205ENST00000494297 GRIN2AQ12879 1464 aa9.05□□□□□ -0.96
SRPRB-205ENST00000494297 CARMIL1Q5VZK9 1371 aa9.05□□□□□ -0.96
SRPRB-205ENST00000494297 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
SRPRB-205ENST00000494297 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
SRPRB-205ENST00000494297 CAPN15O75808 1086 aa9.04□□□□□ -0.96
SRPRB-205ENST00000494297 NUP160Q12769 1436 aa9.04□□□□□ -0.96
SRPRB-205ENST00000494297 DSG3P32926 999 aa9.02□□□□□ -0.97
SRPRB-205ENST00000494297 CLASP1Q7Z460 1538 aa9.01□□□□□ -0.97
SRPRB-205ENST00000494297 CUL7Q14999 1698 aa9.01□□□□□ -0.97
SRPRB-205ENST00000494297 EEA1Q15075 1411 aa9□□□□□ -0.97
SRPRB-205ENST00000494297 CSRNP3Q8WYN3 585 aa9□□□□□ -0.97
SRPRB-205ENST00000494297 CEP170Q5SW79 1584 aa8.99□□□□□ -0.97
SRPRB-205ENST00000494297 RAPGEF2Q9Y4G8 1499 aa8.98□□□□□ -0.97
SRPRB-205ENST00000494297 JPH4Q96JJ6 628 aa8.98□□□□□ -0.97
SRPRB-205ENST00000494297 SPINK5Q9NQ38 1064 aaPredicted RBP8.98□□□□□ -0.97
SRPRB-205ENST00000494297 PRXQ9BXM0 1461 aa8.97□□□□□ -0.97
SRPRB-205ENST00000494297 ARHGEF11O15085 1522 aa8.97□□□□□ -0.97
SRPRB-205ENST00000494297 KIAA0586Q9BVV6 1533 aa8.97□□□□□ -0.97
SRPRB-205ENST00000494297 RIMBP3CA6NJZ7 1639 aa8.94□□□□□ -0.98
SRPRB-205ENST00000494297 RIMBP3BA6NNM3 1639 aa8.94□□□□□ -0.98
SRPRB-205ENST00000494297 RIMBP3Q9UFD9 1639 aa8.94□□□□□ -0.98
SRPRB-205ENST00000494297 CYB5RLQ6IPT4 315 aa8.93□□□□□ -0.98
SRPRB-205ENST00000494297 SHROOM2Q13796 1616 aa8.92□□□□□ -0.98
SRPRB-205ENST00000494297 SLC4A2P04920 1241 aa8.92□□□□□ -0.98
SRPRB-205ENST00000494297 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
SRPRB-205ENST00000494297 PRG4Q92954 1404 aaPredicted RBP8.91□□□□□ -0.98
SRPRB-205ENST00000494297 ARAP1Q96P48 1450 aa8.9□□□□□ -0.98
SRPRB-205ENST00000494297 TRHP20396 242 aaPredicted RBP8.9□□□□□ -0.98
SRPRB-205ENST00000494297 ERCC6L2Q5T890 1561 aa8.88□□□□□ -0.99
SRPRB-205ENST00000494297 IQGAP2Q13576 1575 aa8.87□□□□□ -0.99
SRPRB-205ENST00000494297 UGGT2Q9NYU1 1516 aa8.86□□□□□ -0.99
SRPRB-205ENST00000494297 CARMIL2Q6F5E8 1435 aa8.86□□□□□ -0.99
SRPRB-205ENST00000494297 KIF21BO75037 1637 aa8.85□□□□□ -0.99
SRPRB-205ENST00000494297 APLP2Q06481 763 aa8.84□□□□□ -0.99
SRPRB-205ENST00000494297 DISP1Q96F81 1524 aa8.84□□□□□ -0.99
SRPRB-205ENST00000494297 TNIKQ9UKE5 1360 aa8.84□□□□□ -0.99
SRPRB-205ENST00000494297 PTPRGP23470 1445 aa8.83□□□□□ -1
SRPRB-205ENST00000494297 ABCB7O75027 752 aa8.83□□□□□ -1
SRPRB-205ENST00000494297 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
SRPRB-205ENST00000494297 GOLGA3Q08378 1498 aa8.82□□□□□ -1
SRPRB-205ENST00000494297 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
SRPRB-205ENST00000494297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.81□□□□□ -1
SRPRB-205ENST00000494297 HNRNPUL2Q1KMD3 747 aaKnown RBP8.81□□□□□ -1
SRPRB-205ENST00000494297 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
SRPRB-205ENST00000494297 KIAA0556O60303 1618 aa8.78□□□□□ -1
SRPRB-205ENST00000494297 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
SRPRB-205ENST00000494297 EHMT2Q96KQ7 1210 aa8.77□□□□□ -1.01
SRPRB-205ENST00000494297 UACAQ9BZF9 1416 aa8.77□□□□□ -1.01
SRPRB-205ENST00000494297 UHRF1BP1LA0JNW5 1464 aa8.77□□□□□ -1.01
SRPRB-205ENST00000494297 P3H3Q8IVL6 736 aa8.76□□□□□ -1.01
SRPRB-205ENST00000494297 SP7Q8TDD2 431 aaPredicted RBP8.76□□□□□ -1.01
SRPRB-205ENST00000494297 TTBK1Q5TCY1 1321 aaPredicted RBP8.76□□□□□ -1.01
SRPRB-205ENST00000494297 SAMD9Q5K651 1589 aa8.75□□□□□ -1.01
SRPRB-205ENST00000494297 SAMD1Q6SPF0 538 aaPredicted RBP8.75□□□□□ -1.01
SRPRB-205ENST00000494297 RANGAP1P46060 587 aaPredicted RBP8.74□□□□□ -1.01
SRPRB-205ENST00000494297 ADCY10Q96PN6 1610 aa8.73□□□□□ -1.01
SRPRB-205ENST00000494297 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
SRPRB-205ENST00000494297 ABCC2Q92887 1545 aa8.72□□□□□ -1.01
SRPRB-205ENST00000494297 PLB1Q6P1J6 1458 aa8.71□□□□□ -1.01
SRPRB-205ENST00000494297 KDM5BQ9UGL1 1544 aa8.71□□□□□ -1.01
SRPRB-205ENST00000494297 ABCA8O94911 1581 aa8.71□□□□□ -1.02
SRPRB-205ENST00000494297 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
SRPRB-205ENST00000494297 MAPKBP1O60336 1514 aa8.7□□□□□ -1.02
SRPRB-205ENST00000494297 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
SRPRB-205ENST00000494297 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
SRPRB-205ENST00000494297 SLC4A1APQ9BWU0 796 aaKnown RBP8.7□□□□□ -1.02
SRPRB-205ENST00000494297 FHOD3Q2V2M9 1422 aa8.7□□□□□ -1.02
SRPRB-205ENST00000494297 FMN1Q68DA7 1419 aa8.68□□□□□ -1.02
SRPRB-205ENST00000494297 MYCNP04198 464 aaPredicted RBP8.67□□□□□ -1.02
SRPRB-205ENST00000494297 ABCC10Q5T3U5 1492 aa8.67□□□□□ -1.02
SRPRB-205ENST00000494297 ATP10BO94823 1461 aa8.66□□□□□ -1.02
SRPRB-205ENST00000494297 CLIP1P30622 1438 aa8.66□□□□□ -1.02
SRPRB-205ENST00000494297 ASXL2Q76L83 1435 aa8.66□□□□□ -1.02
SRPRB-205ENST00000494297 FAM69CQ0P6D2 419 aa8.66□□□□□ -1.02
SRPRB-205ENST00000494297 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
SRPRB-205ENST00000494297 NUP153P49790 1475 aaKnown RBP8.64□□□□□ -1.03
SRPRB-205ENST00000494297 ZCCHC11Q5TAX3 1644 aaKnown RBP8.64□□□□□ -1.03
SRPRB-205ENST00000494297 CEP162Q5TB80 1403 aa8.63□□□□□ -1.03
SRPRB-205ENST00000494297 PLEKHD1A6NEE1 506 aa8.62□□□□□ -1.03
SRPRB-205ENST00000494297 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
SRPRB-205ENST00000494297 WDR7Q9Y4E6 1490 aa8.62□□□□□ -1.03
SRPRB-205ENST00000494297 GLI2P10070 1586 aa8.61□□□□□ -1.03
SRPRB-205ENST00000494297 EPRSP07814 1512 aaKnown RBP8.61□□□□□ -1.03
SRPRB-205ENST00000494297 CASKIN1Q8WXD9 1431 aa8.61□□□□□ -1.03
SRPRB-205ENST00000494297 DIP2BQ9P265 1576 aa8.61□□□□□ -1.03
SRPRB-205ENST00000494297 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
SRPRB-205ENST00000494297 ATP1B4Q9UN42 357 aaPredicted RBP8.6□□□□□ -1.03
SRPRB-205ENST00000494297 POLA2Q14181 598 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms