RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 ABCA5Q8WWZ7 1642 aa10.56□□□□□ -0.72
FNDC3B-212ENST00000494000 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
FNDC3B-212ENST00000494000 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
FNDC3B-212ENST00000494000 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
FNDC3B-212ENST00000494000 CARMIL1Q5VZK9 1371 aa10.54□□□□□ -0.72
FNDC3B-212ENST00000494000 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
FNDC3B-212ENST00000494000 CEP162Q5TB80 1403 aa10.53□□□□□ -0.72
FNDC3B-212ENST00000494000 PBRM1Q86U86 1689 aa10.49□□□□□ -0.73
FNDC3B-212ENST00000494000 GRIN2BQ13224 1484 aa10.48□□□□□ -0.73
FNDC3B-212ENST00000494000 PHF23Q9BUL5 403 aaPredicted RBP10.48□□□□□ -0.73
FNDC3B-212ENST00000494000 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
FNDC3B-212ENST00000494000 CLIP1P30622 1438 aa10.47□□□□□ -0.73
FNDC3B-212ENST00000494000 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
FNDC3B-212ENST00000494000 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.74
FNDC3B-212ENST00000494000 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
FNDC3B-212ENST00000494000 CTTNBP2Q8WZ74 1663 aa10.43□□□□□ -0.74
FNDC3B-212ENST00000494000 ADAMTS12P58397 1594 aa10.43□□□□□ -0.74
FNDC3B-212ENST00000494000 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
FNDC3B-212ENST00000494000 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
FNDC3B-212ENST00000494000 EFCAB5A4FU69 1503 aa10.4□□□□□ -0.74
FNDC3B-212ENST00000494000 AQRO60306 1485 aaKnown RBP eCLIP10.4□□□□□ -0.741e-7■■■■□ 25.1
FNDC3B-212ENST00000494000 VPS8Q8N3P4 1428 aa10.4□□□□□ -0.74
FNDC3B-212ENST00000494000 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
FNDC3B-212ENST00000494000 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
FNDC3B-212ENST00000494000 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
FNDC3B-212ENST00000494000 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
FNDC3B-212ENST00000494000 ARHGAP35Q9NRY4 1499 aa10.35□□□□□ -0.75
FNDC3B-212ENST00000494000 RANGAP1P46060 587 aaPredicted RBP10.35□□□□□ -0.75
FNDC3B-212ENST00000494000 ARAP1Q96P48 1450 aa10.34□□□□□ -0.75
FNDC3B-212ENST00000494000 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
FNDC3B-212ENST00000494000 GRIN2AQ12879 1464 aa10.32□□□□□ -0.76
FNDC3B-212ENST00000494000 IQGAP2Q13576 1575 aa10.32□□□□□ -0.76
FNDC3B-212ENST00000494000 HOMEZQ8IX15 550 aa10.32□□□□□ -0.76
FNDC3B-212ENST00000494000 KIAA0586Q9BVV6 1533 aa10.31□□□□□ -0.76
FNDC3B-212ENST00000494000 SAMD9Q5K651 1589 aa10.31□□□□□ -0.76
FNDC3B-212ENST00000494000 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
FNDC3B-212ENST00000494000 FMN1Q68DA7 1419 aa10.29□□□□□ -0.76
FNDC3B-212ENST00000494000 UGGT2Q9NYU1 1516 aa10.29□□□□□ -0.76
FNDC3B-212ENST00000494000 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
FNDC3B-212ENST00000494000 NUP160Q12769 1436 aa10.27□□□□□ -0.77
FNDC3B-212ENST00000494000 FYCO1Q9BQS8 1478 aa10.25□□□□□ -0.77
FNDC3B-212ENST00000494000 CASKIN1Q8WXD9 1431 aa10.24□□□□□ -0.77
FNDC3B-212ENST00000494000 CEP170Q5SW79 1584 aa10.22□□□□□ -0.77
FNDC3B-212ENST00000494000 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.77
FNDC3B-212ENST00000494000 PCGF6Q9BYE7 350 aa10.21□□□□□ -0.78
FNDC3B-212ENST00000494000 CARMIL2Q6F5E8 1435 aa10.21□□□□□ -0.78
FNDC3B-212ENST00000494000 CFAP43Q8NDM7 1665 aa10.2□□□□□ -0.78
FNDC3B-212ENST00000494000 TIAM1Q13009 1591 aa10.2□□□□□ -0.78
FNDC3B-212ENST00000494000 KIAA0556O60303 1618 aa10.2□□□□□ -0.78
FNDC3B-212ENST00000494000 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
FNDC3B-212ENST00000494000 BCL11AQ9H165 835 aa10.2□□□□□ -0.78
FNDC3B-212ENST00000494000 CHD1O14646 1710 aa10.19□□□□□ -0.78
FNDC3B-212ENST00000494000 CCDC18Q5T9S5 1454 aa10.18□□□□□ -0.78
FNDC3B-212ENST00000494000 FBLN2P98095 1184 aa10.18□□□□□ -0.78
FNDC3B-212ENST00000494000 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
FNDC3B-212ENST00000494000 DISP1Q96F81 1524 aa10.17□□□□□ -0.78
FNDC3B-212ENST00000494000 GTF3C3Q9Y5Q9 886 aa10.16□□□□□ -0.78
FNDC3B-212ENST00000494000 P3H3Q8IVL6 736 aa10.16□□□□□ -0.78
FNDC3B-212ENST00000494000 JPH4Q96JJ6 628 aa10.16□□□□□ -0.78
FNDC3B-212ENST00000494000 LRRC9Q6ZRR7 1453 aa10.15□□□□□ -0.78
FNDC3B-212ENST00000494000 SHROOM2Q13796 1616 aa10.14□□□□□ -0.79
FNDC3B-212ENST00000494000 BCANQ96GW7 911 aa10.13□□□□□ -0.79
FNDC3B-212ENST00000494000 NPM2Q86SE8 214 aaKnown RBP10.12□□□□□ -0.79
FNDC3B-212ENST00000494000 RAPGEF6Q8TEU7 1601 aa10.11□□□□□ -0.79
FNDC3B-212ENST00000494000 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
FNDC3B-212ENST00000494000 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
FNDC3B-212ENST00000494000 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
FNDC3B-212ENST00000494000 EHBP1L1Q8N3D4 1523 aa10.1□□□□□ -0.79
FNDC3B-212ENST00000494000 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
FNDC3B-212ENST00000494000 EPRSP07814 1512 aaKnown RBP10.09□□□□□ -0.79
FNDC3B-212ENST00000494000 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
FNDC3B-212ENST00000494000 ATP1B4Q9UN42 357 aaPredicted RBP10.08□□□□□ -0.8
FNDC3B-212ENST00000494000 PRG4Q92954 1404 aaPredicted RBP10.08□□□□□ -0.8
FNDC3B-212ENST00000494000 MTUS2Q5JR59 1369 aa10.08□□□□□ -0.8
FNDC3B-212ENST00000494000 CDK11AQ9UQ88 783 aaPredicted RBP10.08□□□□□ -0.8
FNDC3B-212ENST00000494000 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
FNDC3B-212ENST00000494000 SUPT6HQ7KZ85 1726 aaKnown RBP10.07□□□□□ -0.8
FNDC3B-212ENST00000494000 LRRIQ1Q96JM4 1722 aa10.07□□□□□ -0.8
FNDC3B-212ENST00000494000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.07□□□□□ -0.8
FNDC3B-212ENST00000494000 ABCA8O94911 1581 aa10.06□□□□□ -0.8
FNDC3B-212ENST00000494000 PTPRGP23470 1445 aa10.05□□□□□ -0.8
FNDC3B-212ENST00000494000 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
FNDC3B-212ENST00000494000 CCNB3Q8WWL7 1395 aa10.04□□□□□ -0.8
FNDC3B-212ENST00000494000 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
FNDC3B-212ENST00000494000 ZEB1P37275 1124 aaPredicted RBP10.03□□□□□ -0.8
FNDC3B-212ENST00000494000 ARHGEF11O15085 1522 aa10.02□□□□□ -0.81
FNDC3B-212ENST00000494000 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
FNDC3B-212ENST00000494000 NCOA2Q15596 1464 aa10.01□□□□□ -0.81
FNDC3B-212ENST00000494000 UACAQ9BZF9 1416 aa10□□□□□ -0.81
FNDC3B-212ENST00000494000 UHRF1BP1LA0JNW5 1464 aa10□□□□□ -0.81
FNDC3B-212ENST00000494000 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
FNDC3B-212ENST00000494000 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
FNDC3B-212ENST00000494000 TROQ12816 1431 aaPredicted RBP10□□□□□ -0.81
FNDC3B-212ENST00000494000 MYOM3Q5VTT5 1437 aa10□□□□□ -0.81
FNDC3B-212ENST00000494000 CDK13Q14004 1512 aaKnown RBP9.99□□□□□ -0.81
FNDC3B-212ENST00000494000 MIA2Q96PC5 1412 aa9.99□□□□□ -0.81
FNDC3B-212ENST00000494000 PHLDB1Q86UU1 1377 aa9.99□□□□□ -0.81
FNDC3B-212ENST00000494000 FGD6Q6ZV73 1430 aa9.98□□□□□ -0.81
FNDC3B-212ENST00000494000 ABCC2Q92887 1545 aa9.98□□□□□ -0.81
FNDC3B-212ENST00000494000 HRCP23327 699 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms