RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 PRKCSHP14314 528 aaPredicted RBP19.59■□□□□ 0.73
TFE3-204ENST00000493583 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
TFE3-204ENST00000493583 NESP48681 1621 aa19.57■□□□□ 0.72
TFE3-204ENST00000493583 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
TFE3-204ENST00000493583 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
TFE3-204ENST00000493583 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
TFE3-204ENST00000493583 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
TFE3-204ENST00000493583 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
TFE3-204ENST00000493583 TOP2BQ02880 1626 aa19.49■□□□□ 0.71
TFE3-204ENST00000493583 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
TFE3-204ENST00000493583 ANP32CO43423 234 aa19.49■□□□□ 0.71
TFE3-204ENST00000493583 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
TFE3-204ENST00000493583 CARMIL1Q5VZK9 1371 aa19.48■□□□□ 0.71
TFE3-204ENST00000493583 IGF1RP08069 1367 aa19.46■□□□□ 0.71
TFE3-204ENST00000493583 MSH5O43196 834 aa19.44■□□□□ 0.7
TFE3-204ENST00000493583 CFTRP13569 1480 aa19.44■□□□□ 0.7
TFE3-204ENST00000493583 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
TFE3-204ENST00000493583 CLSPNQ9HAW4 1339 aa19.4■□□□□ 0.7
TFE3-204ENST00000493583 PRXQ9BXM0 1461 aa19.4■□□□□ 0.7
TFE3-204ENST00000493583 WDR97A6NE52 1622 aa19.39■□□□□ 0.7
TFE3-204ENST00000493583 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
TFE3-204ENST00000493583 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
TFE3-204ENST00000493583 ERICH6Q7L0X2 663 aa19.38■□□□□ 0.69
TFE3-204ENST00000493583 FBLN2P98095 1184 aa19.38■□□□□ 0.69
TFE3-204ENST00000493583 PPP1R15AO75807 674 aaPredicted RBP19.37■□□□□ 0.69
TFE3-204ENST00000493583 FHOD3Q2V2M9 1422 aa19.37■□□□□ 0.69
TFE3-204ENST00000493583 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
TFE3-204ENST00000493583 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
TFE3-204ENST00000493583 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
TFE3-204ENST00000493583 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
TFE3-204ENST00000493583 CCDC184Q52MB2 194 aa19.34■□□□□ 0.69
TFE3-204ENST00000493583 FOXD1Q16676 465 aa19.31■□□□□ 0.68
TFE3-204ENST00000493583 B4GALNT3Q6L9W6 998 aa19.31■□□□□ 0.68
TFE3-204ENST00000493583 NBR1Q14596 966 aa19.28■□□□□ 0.68
TFE3-204ENST00000493583 SETD5Q9C0A6 1442 aa19.28■□□□□ 0.68
TFE3-204ENST00000493583 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
TFE3-204ENST00000493583 RRBP1Q9P2E9 1410 aaKnown RBP19.28■□□□□ 0.68
TFE3-204ENST00000493583 MAPKBP1O60336 1514 aa19.27■□□□□ 0.68
TFE3-204ENST00000493583 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
TFE3-204ENST00000493583 BIVM-ERCC5R4GMW8 1640 aa19.23■□□□□ 0.67
TFE3-204ENST00000493583 CDK11AQ9UQ88 783 aaPredicted RBP19.23■□□□□ 0.67
TFE3-204ENST00000493583 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
TFE3-204ENST00000493583 POLA1P09884 1462 aaPredicted RBP19.14■□□□□ 0.65
TFE3-204ENST00000493583 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
TFE3-204ENST00000493583 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
TFE3-204ENST00000493583 SALL2Q9Y467 1007 aaPredicted RBP19.13■□□□□ 0.65
TFE3-204ENST00000493583 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
TFE3-204ENST00000493583 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
TFE3-204ENST00000493583 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
TFE3-204ENST00000493583 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
TFE3-204ENST00000493583 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.65
TFE3-204ENST00000493583 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.657e-7■■■■■ 32.6
TFE3-204ENST00000493583 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
TFE3-204ENST00000493583 WASHC2AQ641Q2 1341 aa19.06■□□□□ 0.64
TFE3-204ENST00000493583 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
TFE3-204ENST00000493583 PAK3O75914 559 aaPredicted RBP19.03■□□□□ 0.64
TFE3-204ENST00000493583 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
TFE3-204ENST00000493583 NPM2Q86SE8 214 aaKnown RBP19.02■□□□□ 0.64
TFE3-204ENST00000493583 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
TFE3-204ENST00000493583 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
TFE3-204ENST00000493583 DEKP35659 375 aaKnown RBP18.98■□□□□ 0.63
TFE3-204ENST00000493583 ERCC6Q03468 1493 aa18.98■□□□□ 0.63
TFE3-204ENST00000493583 RTN4Q9NQC3 1192 aaKnown RBP18.98■□□□□ 0.63
TFE3-204ENST00000493583 PTPRKQ15262 1439 aa18.96■□□□□ 0.63
TFE3-204ENST00000493583 LAMC3Q9Y6N6 1575 aa18.95■□□□□ 0.62
TFE3-204ENST00000493583 L3MBTL2Q969R5 705 aa18.95■□□□□ 0.62
TFE3-204ENST00000493583 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
TFE3-204ENST00000493583 PCF11O94913 1555 aaKnown RBP18.95■□□□□ 0.62
TFE3-204ENST00000493583 TIAM1Q13009 1591 aa18.94■□□□□ 0.62
TFE3-204ENST00000493583 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
TFE3-204ENST00000493583 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
TFE3-204ENST00000493583 ZNF644Q9H582 1327 aaPredicted RBP18.94■□□□□ 0.62
TFE3-204ENST00000493583 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
TFE3-204ENST00000493583 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
TFE3-204ENST00000493583 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
TFE3-204ENST00000493583 KIF21AQ7Z4S6 1674 aa18.9■□□□□ 0.62
TFE3-204ENST00000493583 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
TFE3-204ENST00000493583 SKAP1Q86WV1 359 aa18.88■□□□□ 0.61
TFE3-204ENST00000493583 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
TFE3-204ENST00000493583 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
TFE3-204ENST00000493583 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
TFE3-204ENST00000493583 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
TFE3-204ENST00000493583 ABCA10Q8WWZ4 1543 aa18.85■□□□□ 0.61
TFE3-204ENST00000493583 AKNAQ7Z591 1439 aa18.84■□□□□ 0.61
TFE3-204ENST00000493583 FANCIQ9NVI1 1328 aa18.82■□□□□ 0.6
TFE3-204ENST00000493583 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
TFE3-204ENST00000493583 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
TFE3-204ENST00000493583 MPHOSPH9Q99550 1183 aa18.8■□□□□ 0.6
TFE3-204ENST00000493583 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
TFE3-204ENST00000493583 FGD6Q6ZV73 1430 aa18.8■□□□□ 0.6
TFE3-204ENST00000493583 KDM2AQ9Y2K7 1162 aa18.8■□□□□ 0.6
TFE3-204ENST00000493583 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
TFE3-204ENST00000493583 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
TFE3-204ENST00000493583 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
TFE3-204ENST00000493583 SLC4A1APQ9BWU0 796 aaKnown RBP18.76■□□□□ 0.59
TFE3-204ENST00000493583 CASKIN1Q8WXD9 1431 aa18.76■□□□□ 0.59
TFE3-204ENST00000493583 CDK13Q14004 1512 aaKnown RBP18.75■□□□□ 0.59
TFE3-204ENST00000493583 NCOA2Q15596 1464 aa18.73■□□□□ 0.59
TFE3-204ENST00000493583 KIF7Q2M1P5 1343 aa18.73■□□□□ 0.59
TFE3-204ENST00000493583 NAIPQ13075 1403 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms