RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-205ENST00000493026 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
PSMD11-205ENST00000493026 APLP2Q06481 763 aa19.04■□□□□ 0.64
PSMD11-205ENST00000493026 TMEM132AQ24JP5 1023 aa18.99■□□□□ 0.63
PSMD11-205ENST00000493026 ACIN1Q9UKV3 1341 aaKnown RBP18.99■□□□□ 0.63
PSMD11-205ENST00000493026 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
PSMD11-205ENST00000493026 CFTRP13569 1480 aa18.97■□□□□ 0.63
PSMD11-205ENST00000493026 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
PSMD11-205ENST00000493026 KIF27Q86VH2 1401 aa18.94■□□□□ 0.62
PSMD11-205ENST00000493026 CUX1P39880 1505 aa18.93■□□□□ 0.62
PSMD11-205ENST00000493026 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
PSMD11-205ENST00000493026 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
PSMD11-205ENST00000493026 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
PSMD11-205ENST00000493026 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
PSMD11-205ENST00000493026 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
PSMD11-205ENST00000493026 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
PSMD11-205ENST00000493026 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
PSMD11-205ENST00000493026 CUX2O14529 1486 aa18.73■□□□□ 0.59
PSMD11-205ENST00000493026 ARHGAP35Q9NRY4 1499 aa18.72■□□□□ 0.59
PSMD11-205ENST00000493026 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
PSMD11-205ENST00000493026 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
PSMD11-205ENST00000493026 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
PSMD11-205ENST00000493026 IGF1RP08069 1367 aa18.7■□□□□ 0.58
PSMD11-205ENST00000493026 KANK4Q5T7N3 995 aaPredicted RBP18.69■□□□□ 0.58
PSMD11-205ENST00000493026 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
PSMD11-205ENST00000493026 MIER1Q8N108 512 aa18.61■□□□□ 0.57
PSMD11-205ENST00000493026 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
PSMD11-205ENST00000493026 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
PSMD11-205ENST00000493026 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.57
PSMD11-205ENST00000493026 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.56
PSMD11-205ENST00000493026 FOXD1Q16676 465 aa18.56■□□□□ 0.56
PSMD11-205ENST00000493026 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
PSMD11-205ENST00000493026 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
PSMD11-205ENST00000493026 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
PSMD11-205ENST00000493026 PAXIP1Q6ZW49 1069 aaPredicted RBP18.49■□□□□ 0.55
PSMD11-205ENST00000493026 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
PSMD11-205ENST00000493026 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
PSMD11-205ENST00000493026 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
PSMD11-205ENST00000493026 ABCA10Q8WWZ4 1543 aa18.46■□□□□ 0.55
PSMD11-205ENST00000493026 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
PSMD11-205ENST00000493026 ERICH6Q7L0X2 663 aa18.46■□□□□ 0.55
PSMD11-205ENST00000493026 TSHZ2Q9NRE2 1034 aa18.44■□□□□ 0.54
PSMD11-205ENST00000493026 EFCAB5A4FU69 1503 aa18.43■□□□□ 0.54
PSMD11-205ENST00000493026 YTHDC1Q96MU7 727 aaKnown RBP18.43■□□□□ 0.54
PSMD11-205ENST00000493026 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
PSMD11-205ENST00000493026 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.545e-7■■■■□ 20
PSMD11-205ENST00000493026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
PSMD11-205ENST00000493026 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
PSMD11-205ENST00000493026 SETD5Q9C0A6 1442 aa18.41■□□□□ 0.54
PSMD11-205ENST00000493026 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
PSMD11-205ENST00000493026 CUL7Q14999 1698 aa18.38■□□□□ 0.53
PSMD11-205ENST00000493026 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
PSMD11-205ENST00000493026 PHLDB1Q86UU1 1377 aa18.37■□□□□ 0.53
PSMD11-205ENST00000493026 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
PSMD11-205ENST00000493026 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
PSMD11-205ENST00000493026 MAPKBP1O60336 1514 aa18.37■□□□□ 0.53
PSMD11-205ENST00000493026 CASKIN1Q8WXD9 1431 aa18.36■□□□□ 0.53
PSMD11-205ENST00000493026 PKD2Q13563 968 aa18.35■□□□□ 0.53
PSMD11-205ENST00000493026 PCF11O94913 1555 aaKnown RBP18.35■□□□□ 0.53
PSMD11-205ENST00000493026 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
PSMD11-205ENST00000493026 ITGAEP38570 1179 aa18.31■□□□□ 0.52
PSMD11-205ENST00000493026 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
PSMD11-205ENST00000493026 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
PSMD11-205ENST00000493026 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
PSMD11-205ENST00000493026 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.51
PSMD11-205ENST00000493026 CTTNBP2Q8WZ74 1663 aa18.25■□□□□ 0.51
PSMD11-205ENST00000493026 NBR1Q14596 966 aa18.25■□□□□ 0.51
PSMD11-205ENST00000493026 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
PSMD11-205ENST00000493026 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
PSMD11-205ENST00000493026 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
PSMD11-205ENST00000493026 P3H3Q8IVL6 736 aa18.2■□□□□ 0.5
PSMD11-205ENST00000493026 NESP48681 1621 aa18.19■□□□□ 0.5
PSMD11-205ENST00000493026 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
PSMD11-205ENST00000493026 THOC2Q8NI27 1593 aaKnown RBP18.19■□□□□ 0.5
PSMD11-205ENST00000493026 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
PSMD11-205ENST00000493026 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
PSMD11-205ENST00000493026 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
PSMD11-205ENST00000493026 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
PSMD11-205ENST00000493026 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.16■□□□□ 0.5
PSMD11-205ENST00000493026 MYT1Q01538 1121 aa18.15■□□□□ 0.5
PSMD11-205ENST00000493026 ATP1B4Q9UN42 357 aaPredicted RBP18.15■□□□□ 0.5
PSMD11-205ENST00000493026 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
PSMD11-205ENST00000493026 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
PSMD11-205ENST00000493026 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
PSMD11-205ENST00000493026 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
PSMD11-205ENST00000493026 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
PSMD11-205ENST00000493026 IFNLR1Q8IU57 520 aaPredicted RBP18.11■□□□□ 0.49
PSMD11-205ENST00000493026 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
PSMD11-205ENST00000493026 UACAQ9BZF9 1416 aa18.09■□□□□ 0.49
PSMD11-205ENST00000493026 BBXQ8WY36 941 aaPredicted RBP18.09■□□□□ 0.49
PSMD11-205ENST00000493026 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
PSMD11-205ENST00000493026 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
PSMD11-205ENST00000493026 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.48
PSMD11-205ENST00000493026 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
PSMD11-205ENST00000493026 KIF21AQ7Z4S6 1674 aa18.07■□□□□ 0.48
PSMD11-205ENST00000493026 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
PSMD11-205ENST00000493026 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
PSMD11-205ENST00000493026 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
PSMD11-205ENST00000493026 ARHGEF11O15085 1522 aa18.04■□□□□ 0.48
PSMD11-205ENST00000493026 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
PSMD11-205ENST00000493026 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms