RNA–Protein interactions for RNA: ENST00000492809.5

PCBP4-215, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-215ENST00000492809 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
PCBP4-215ENST00000492809 TSHZ2Q9NRE2 1034 aa21.51■■□□□ 1.03
PCBP4-215ENST00000492809 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
PCBP4-215ENST00000492809 POLA1P09884 1462 aaPredicted RBP21.5■■□□□ 1.03
PCBP4-215ENST00000492809 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
PCBP4-215ENST00000492809 CFAP43Q8NDM7 1665 aa21.48■■□□□ 1.03
PCBP4-215ENST00000492809 NESP48681 1621 aa21.47■■□□□ 1.03
PCBP4-215ENST00000492809 CUL7Q14999 1698 aa21.47■■□□□ 1.03
PCBP4-215ENST00000492809 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
PCBP4-215ENST00000492809 LRRC9Q6ZRR7 1453 aa21.46■■□□□ 1.03
PCBP4-215ENST00000492809 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
PCBP4-215ENST00000492809 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
PCBP4-215ENST00000492809 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
PCBP4-215ENST00000492809 CTTNBP2Q8WZ74 1663 aa21.42■■□□□ 1.02
PCBP4-215ENST00000492809 EFCAB5A4FU69 1503 aa21.41■■□□□ 1.02
PCBP4-215ENST00000492809 URB2Q14146 1524 aaKnown RBP21.36■■□□□ 1.01
PCBP4-215ENST00000492809 PHLDB1Q86UU1 1377 aa21.35■■□□□ 1.01
PCBP4-215ENST00000492809 FYCO1Q9BQS8 1478 aa21.35■■□□□ 1.01
PCBP4-215ENST00000492809 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.011e-8■■■□□ 18.9
PCBP4-215ENST00000492809 FHOD3Q2V2M9 1422 aa21.33■■□□□ 1.01
PCBP4-215ENST00000492809 RAB3GAP2Q9H2M9 1393 aa21.33■■□□□ 1
PCBP4-215ENST00000492809 ITGAEP38570 1179 aa21.33■■□□□ 1
PCBP4-215ENST00000492809 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
PCBP4-215ENST00000492809 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
PCBP4-215ENST00000492809 P3H3Q8IVL6 736 aa21.31■■□□□ 1
PCBP4-215ENST00000492809 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
PCBP4-215ENST00000492809 MAPKBP1O60336 1514 aa21.28■■□□□ 1
PCBP4-215ENST00000492809 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
PCBP4-215ENST00000492809 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
PCBP4-215ENST00000492809 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
PCBP4-215ENST00000492809 SAMD9Q5K651 1589 aa21.22■□□□□ 0.99
PCBP4-215ENST00000492809 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
PCBP4-215ENST00000492809 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
PCBP4-215ENST00000492809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.21■□□□□ 0.99
PCBP4-215ENST00000492809 KIF21AQ7Z4S6 1674 aa21.2■□□□□ 0.98
PCBP4-215ENST00000492809 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
PCBP4-215ENST00000492809 FAM50AQ14320 339 aaKnown RBP21.19■□□□□ 0.98
PCBP4-215ENST00000492809 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
PCBP4-215ENST00000492809 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
PCBP4-215ENST00000492809 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
PCBP4-215ENST00000492809 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.98
PCBP4-215ENST00000492809 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
PCBP4-215ENST00000492809 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
PCBP4-215ENST00000492809 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
PCBP4-215ENST00000492809 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
PCBP4-215ENST00000492809 FKBP8Q14318 412 aa21.08■□□□□ 0.97
PCBP4-215ENST00000492809 BCANQ96GW7 911 aa21.06■□□□□ 0.96
PCBP4-215ENST00000492809 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
PCBP4-215ENST00000492809 MTUS2Q5JR59 1369 aa21.05■□□□□ 0.96
PCBP4-215ENST00000492809 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
PCBP4-215ENST00000492809 SUPT6HQ7KZ85 1726 aaKnown RBP21.02■□□□□ 0.96
PCBP4-215ENST00000492809 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
PCBP4-215ENST00000492809 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
PCBP4-215ENST00000492809 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
PCBP4-215ENST00000492809 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
PCBP4-215ENST00000492809 MYOM3Q5VTT5 1437 aa20.98■□□□□ 0.95
PCBP4-215ENST00000492809 NEFLP07196 543 aa20.97■□□□□ 0.95
PCBP4-215ENST00000492809 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
PCBP4-215ENST00000492809 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
PCBP4-215ENST00000492809 PTPN23Q9H3S7 1636 aa20.96■□□□□ 0.95
PCBP4-215ENST00000492809 PTPRKQ15262 1439 aa20.96■□□□□ 0.95
PCBP4-215ENST00000492809 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
PCBP4-215ENST00000492809 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
PCBP4-215ENST00000492809 UGGT2Q9NYU1 1516 aa20.95■□□□□ 0.94
PCBP4-215ENST00000492809 IQGAP2Q13576 1575 aa20.94■□□□□ 0.94
PCBP4-215ENST00000492809 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
PCBP4-215ENST00000492809 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
PCBP4-215ENST00000492809 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
PCBP4-215ENST00000492809 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
PCBP4-215ENST00000492809 UACAQ9BZF9 1416 aa20.9■□□□□ 0.94
PCBP4-215ENST00000492809 CCER2I3L3R5 266 aa20.9■□□□□ 0.94
PCBP4-215ENST00000492809 NAIPQ13075 1403 aa20.89■□□□□ 0.93
PCBP4-215ENST00000492809 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.93
PCBP4-215ENST00000492809 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
PCBP4-215ENST00000492809 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
PCBP4-215ENST00000492809 WDR62O43379 1518 aa20.83■□□□□ 0.92
PCBP4-215ENST00000492809 GCC2Q8IWJ2 1684 aa20.82■□□□□ 0.92
PCBP4-215ENST00000492809 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
PCBP4-215ENST00000492809 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
PCBP4-215ENST00000492809 MSH5O43196 834 aa20.78■□□□□ 0.92
PCBP4-215ENST00000492809 ANP32CO43423 234 aa20.78■□□□□ 0.92
PCBP4-215ENST00000492809 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
PCBP4-215ENST00000492809 TRIM52Q96A61 297 aa20.77■□□□□ 0.91
PCBP4-215ENST00000492809 AKNAQ7Z591 1439 aa20.76■□□□□ 0.91
PCBP4-215ENST00000492809 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
PCBP4-215ENST00000492809 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
PCBP4-215ENST00000492809 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
PCBP4-215ENST00000492809 KIAA0556O60303 1618 aa20.73■□□□□ 0.91
PCBP4-215ENST00000492809 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
PCBP4-215ENST00000492809 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
PCBP4-215ENST00000492809 DISP1Q96F81 1524 aa20.7■□□□□ 0.9
PCBP4-215ENST00000492809 KDM6BO15054 1643 aa20.68■□□□□ 0.9
PCBP4-215ENST00000492809 RRP7BPQ9NSQ0 103 aa20.68■□□□□ 0.9
PCBP4-215ENST00000492809 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
PCBP4-215ENST00000492809 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
PCBP4-215ENST00000492809 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
PCBP4-215ENST00000492809 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
PCBP4-215ENST00000492809 CHIC2Q9UKJ5 165 aa20.65■□□□□ 0.9
PCBP4-215ENST00000492809 RAPGEF6Q8TEU7 1601 aa20.65■□□□□ 0.9
PCBP4-215ENST00000492809 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms