RNA–Protein interactions for RNA: ENST00000491936.5

TMEM50A-205, Transcript of transmembrane protein 50A, humanhuman

TSL 1 (best)

Gene TMEM50A, Length 965 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-205ENST00000491936 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
TMEM50A-205ENST00000491936 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
TMEM50A-205ENST00000491936 FBLN2P98095 1184 aa23.74■■□□□ 1.39
TMEM50A-205ENST00000491936 CARMIL1Q5VZK9 1371 aa23.74■■□□□ 1.39
TMEM50A-205ENST00000491936 GRIN2BQ13224 1484 aa23.74■■□□□ 1.39
TMEM50A-205ENST00000491936 TRIM26Q12899 539 aaPredicted RBP23.72■■□□□ 1.39
TMEM50A-205ENST00000491936 CLIP1P30622 1438 aa23.72■■□□□ 1.39
TMEM50A-205ENST00000491936 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
TMEM50A-205ENST00000491936 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
TMEM50A-205ENST00000491936 ABCA5Q8WWZ7 1642 aa23.71■■□□□ 1.39
TMEM50A-205ENST00000491936 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
TMEM50A-205ENST00000491936 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.38
TMEM50A-205ENST00000491936 CUL7Q14999 1698 aa23.66■■□□□ 1.38
TMEM50A-205ENST00000491936 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
TMEM50A-205ENST00000491936 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
TMEM50A-205ENST00000491936 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
TMEM50A-205ENST00000491936 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
TMEM50A-205ENST00000491936 VPS8Q8N3P4 1428 aa23.56■■□□□ 1.36
TMEM50A-205ENST00000491936 ARAP1Q96P48 1450 aa23.5■■□□□ 1.35
TMEM50A-205ENST00000491936 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
TMEM50A-205ENST00000491936 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
TMEM50A-205ENST00000491936 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
TMEM50A-205ENST00000491936 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
TMEM50A-205ENST00000491936 ARHGAP35Q9NRY4 1499 aa23.4■■□□□ 1.34
TMEM50A-205ENST00000491936 APLP2Q06481 763 aa23.39■■□□□ 1.33
TMEM50A-205ENST00000491936 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
TMEM50A-205ENST00000491936 NUP160Q12769 1436 aa23.37■■□□□ 1.33
TMEM50A-205ENST00000491936 EFCAB5A4FU69 1503 aa23.35■■□□□ 1.33
TMEM50A-205ENST00000491936 RANGAP1P46060 587 aaPredicted RBP23.34■■□□□ 1.33
TMEM50A-205ENST00000491936 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
TMEM50A-205ENST00000491936 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
TMEM50A-205ENST00000491936 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
TMEM50A-205ENST00000491936 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
TMEM50A-205ENST00000491936 MAP3K1Q13233 1512 aa23.23■■□□□ 1.31
TMEM50A-205ENST00000491936 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
TMEM50A-205ENST00000491936 SAMD9Q5K651 1589 aa23.15■■□□□ 1.3
TMEM50A-205ENST00000491936 HRCP23327 699 aa23.15■■□□□ 1.3
TMEM50A-205ENST00000491936 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
TMEM50A-205ENST00000491936 IQGAP2Q13576 1575 aa23.1■■□□□ 1.29
TMEM50A-205ENST00000491936 CASKIN1Q8WXD9 1431 aa23.09■■□□□ 1.29
TMEM50A-205ENST00000491936 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
TMEM50A-205ENST00000491936 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
TMEM50A-205ENST00000491936 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
TMEM50A-205ENST00000491936 FYCO1Q9BQS8 1478 aa23.09■■□□□ 1.29
TMEM50A-205ENST00000491936 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
TMEM50A-205ENST00000491936 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
TMEM50A-205ENST00000491936 TIAM1Q13009 1591 aa23.03■■□□□ 1.28
TMEM50A-205ENST00000491936 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
TMEM50A-205ENST00000491936 ZEB1P37275 1124 aaPredicted RBP22.99■■□□□ 1.27
TMEM50A-205ENST00000491936 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
TMEM50A-205ENST00000491936 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
TMEM50A-205ENST00000491936 PCF11O94913 1555 aaKnown RBP22.98■■□□□ 1.27
TMEM50A-205ENST00000491936 LRRC9Q6ZRR7 1453 aa22.95■■□□□ 1.26
TMEM50A-205ENST00000491936 CFAP43Q8NDM7 1665 aa22.94■■□□□ 1.26
TMEM50A-205ENST00000491936 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
TMEM50A-205ENST00000491936 DISP1Q96F81 1524 aa22.86■■□□□ 1.25
TMEM50A-205ENST00000491936 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
TMEM50A-205ENST00000491936 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
TMEM50A-205ENST00000491936 CARMIL2Q6F5E8 1435 aa22.84■■□□□ 1.25
TMEM50A-205ENST00000491936 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
TMEM50A-205ENST00000491936 ADCY10Q96PN6 1610 aa22.83■■□□□ 1.25
TMEM50A-205ENST00000491936 HECW1Q76N89 1606 aa22.82■■□□□ 1.24
TMEM50A-205ENST00000491936 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
TMEM50A-205ENST00000491936 KIF13AQ9H1H9 1805 aa22.78■■□□□ 1.24
TMEM50A-205ENST00000491936 PTPRGP23470 1445 aa22.76■■□□□ 1.23
TMEM50A-205ENST00000491936 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
TMEM50A-205ENST00000491936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.75■■□□□ 1.23
TMEM50A-205ENST00000491936 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
TMEM50A-205ENST00000491936 EPRSP07814 1512 aaKnown RBP22.72■■□□□ 1.23
TMEM50A-205ENST00000491936 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
TMEM50A-205ENST00000491936 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
TMEM50A-205ENST00000491936 HNRNPUL2Q1KMD3 747 aaKnown RBP22.7■■□□□ 1.22
TMEM50A-205ENST00000491936 PHLDB1Q86UU1 1377 aa22.69■■□□□ 1.22
TMEM50A-205ENST00000491936 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
TMEM50A-205ENST00000491936 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
TMEM50A-205ENST00000491936 LRRIQ1Q96JM4 1722 aa22.66■■□□□ 1.22
TMEM50A-205ENST00000491936 RAPGEF6Q8TEU7 1601 aa22.66■■□□□ 1.22
TMEM50A-205ENST00000491936 CDK11AQ9UQ88 783 aaPredicted RBP22.65■■□□□ 1.22
TMEM50A-205ENST00000491936 DIP2BQ9P265 1576 aa22.64■■□□□ 1.22
TMEM50A-205ENST00000491936 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
TMEM50A-205ENST00000491936 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
TMEM50A-205ENST00000491936 UHRF1BP1LA0JNW5 1464 aa22.62■■□□□ 1.21
TMEM50A-205ENST00000491936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
TMEM50A-205ENST00000491936 NUP153P49790 1475 aaKnown RBP22.6■■□□□ 1.21
TMEM50A-205ENST00000491936 NCOA2Q15596 1464 aa22.6■■□□□ 1.21
TMEM50A-205ENST00000491936 UACAQ9BZF9 1416 aa22.6■■□□□ 1.21
TMEM50A-205ENST00000491936 FAM69CQ0P6D2 419 aa22.6■■□□□ 1.21
TMEM50A-205ENST00000491936 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
TMEM50A-205ENST00000491936 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
TMEM50A-205ENST00000491936 ABCA8O94911 1581 aa22.55■■□□□ 1.2
TMEM50A-205ENST00000491936 MAGI3Q5TCQ9 1506 aa22.54■■□□□ 1.2
TMEM50A-205ENST00000491936 CDK13Q14004 1512 aaKnown RBP22.53■■□□□ 1.2
TMEM50A-205ENST00000491936 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
TMEM50A-205ENST00000491936 MIA2Q96PC5 1412 aa22.52■■□□□ 1.2
TMEM50A-205ENST00000491936 PLB1Q6P1J6 1458 aa22.52■■□□□ 1.2
TMEM50A-205ENST00000491936 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
TMEM50A-205ENST00000491936 ASXL2Q76L83 1435 aa22.51■■□□□ 1.19
TMEM50A-205ENST00000491936 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
TMEM50A-205ENST00000491936 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
TMEM50A-205ENST00000491936 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms