RNA–Protein interactions for RNA: ENST00000491907.5

CCNB3-207, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 310 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-207ENST00000491907 PTPRMP28827 1452 aa20.05■□□□□ 0.8
CCNB3-207ENST00000491907 HSPA2P54652 639 aa20.05■□□□□ 0.8
CCNB3-207ENST00000491907 GRIN2BQ13224 1484 aa20.01■□□□□ 0.79
CCNB3-207ENST00000491907 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
CCNB3-207ENST00000491907 WIZO95785 1651 aa19.97■□□□□ 0.79
CCNB3-207ENST00000491907 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
CCNB3-207ENST00000491907 SOGA1O94964 1423 aa19.94■□□□□ 0.78
CCNB3-207ENST00000491907 ADCY10Q96PN6 1610 aa19.94■□□□□ 0.78
CCNB3-207ENST00000491907 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
CCNB3-207ENST00000491907 KIF21BO75037 1637 aa19.86■□□□□ 0.77
CCNB3-207ENST00000491907 ADAMTSL3P82987 1691 aa19.83■□□□□ 0.76
CCNB3-207ENST00000491907 PRG4Q92954 1404 aaPredicted RBP19.83■□□□□ 0.76
CCNB3-207ENST00000491907 NUP160Q12769 1436 aa19.8■□□□□ 0.76
CCNB3-207ENST00000491907 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
CCNB3-207ENST00000491907 GLI2P10070 1586 aa19.78■□□□□ 0.76
CCNB3-207ENST00000491907 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
CCNB3-207ENST00000491907 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
CCNB3-207ENST00000491907 TEX14Q8IWB6 1497 aa19.67■□□□□ 0.74
CCNB3-207ENST00000491907 MADDQ8WXG6 1647 aa19.62■□□□□ 0.73
CCNB3-207ENST00000491907 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
CCNB3-207ENST00000491907 IQSEC2Q5JU85 1478 aa19.61■□□□□ 0.73
CCNB3-207ENST00000491907 MAP3K4Q9Y6R4 1608 aa19.61■□□□□ 0.73
CCNB3-207ENST00000491907 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
CCNB3-207ENST00000491907 ASXL2Q76L83 1435 aa19.59■□□□□ 0.73
CCNB3-207ENST00000491907 SRCAPQ6ZRS2 3230 aa19.57■□□□□ 0.72
CCNB3-207ENST00000491907 LTBP4Q8N2S1 1624 aa19.56■□□□□ 0.72
CCNB3-207ENST00000491907 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
CCNB3-207ENST00000491907 PLB1Q6P1J6 1458 aa19.55■□□□□ 0.72
CCNB3-207ENST00000491907 UBAP1LF5GYI3 381 aa19.53■□□□□ 0.72
CCNB3-207ENST00000491907 BCORL1Q5H9F3 1711 aa19.52■□□□□ 0.72
CCNB3-207ENST00000491907 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
CCNB3-207ENST00000491907 STRCQ7RTU9 1775 aa19.52■□□□□ 0.71
CCNB3-207ENST00000491907 YEATS2Q9ULM3 1422 aa19.51■□□□□ 0.71
CCNB3-207ENST00000491907 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
CCNB3-207ENST00000491907 HSPA1LP34931 641 aa19.5■□□□□ 0.71
CCNB3-207ENST00000491907 IFFO2Q5TF58 517 aa19.5■□□□□ 0.71
CCNB3-207ENST00000491907 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
CCNB3-207ENST00000491907 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
CCNB3-207ENST00000491907 KIAA0586Q9BVV6 1533 aa19.46■□□□□ 0.71
CCNB3-207ENST00000491907 EPRSP07814 1512 aaKnown RBP19.45■□□□□ 0.7
CCNB3-207ENST00000491907 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
CCNB3-207ENST00000491907 PTPRTO14522 1441 aa19.42■□□□□ 0.7
CCNB3-207ENST00000491907 ABCA5Q8WWZ7 1642 aa19.41■□□□□ 0.7
CCNB3-207ENST00000491907 RGS17Q9UGC6 210 aaPredicted RBP19.4■□□□□ 0.7
CCNB3-207ENST00000491907 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
CCNB3-207ENST00000491907 CCDC88BA6NC98 1476 aa19.35■□□□□ 0.69
CCNB3-207ENST00000491907 ARID4BQ4LE39 1312 aaPredicted RBP19.34■□□□□ 0.69
CCNB3-207ENST00000491907 CUL7Q14999 1698 aa19.33■□□□□ 0.68
CCNB3-207ENST00000491907 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
CCNB3-207ENST00000491907 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.68
CCNB3-207ENST00000491907 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
CCNB3-207ENST00000491907 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
CCNB3-207ENST00000491907 CUX1P39880 1505 aa19.22■□□□□ 0.67
CCNB3-207ENST00000491907 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
CCNB3-207ENST00000491907 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
CCNB3-207ENST00000491907 PREX1Q8TCU6 1659 aa19.21■□□□□ 0.67
CCNB3-207ENST00000491907 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
CCNB3-207ENST00000491907 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
CCNB3-207ENST00000491907 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
CCNB3-207ENST00000491907 PTPRGP23470 1445 aa19.18■□□□□ 0.66
CCNB3-207ENST00000491907 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
CCNB3-207ENST00000491907 UPF1Q92900 1129 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCNB3-207ENST00000491907 CD109Q6YHK3 1445 aa19.14■□□□□ 0.65
CCNB3-207ENST00000491907 ARAP3Q8WWN8 1544 aa19.13■□□□□ 0.65
CCNB3-207ENST00000491907 ZNF335Q9H4Z2 1342 aaPredicted RBP19.07■□□□□ 0.64
CCNB3-207ENST00000491907 UHRF1BP1LA0JNW5 1464 aa19.05■□□□□ 0.64
CCNB3-207ENST00000491907 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
CCNB3-207ENST00000491907 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.63
CCNB3-207ENST00000491907 KDM5BQ9UGL1 1544 aa19.01■□□□□ 0.63
CCNB3-207ENST00000491907 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
CCNB3-207ENST00000491907 ZCCHC11Q5TAX3 1644 aaKnown RBP18.98■□□□□ 0.63
CCNB3-207ENST00000491907 TOM1O60784 492 aa18.97■□□□□ 0.63
CCNB3-207ENST00000491907 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
CCNB3-207ENST00000491907 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
CCNB3-207ENST00000491907 FER1L4A9Z1Z3 1794 aa18.96■□□□□ 0.63
CCNB3-207ENST00000491907 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
CCNB3-207ENST00000491907 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
CCNB3-207ENST00000491907 MLECQ14165 292 aa18.91■□□□□ 0.62
CCNB3-207ENST00000491907 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
CCNB3-207ENST00000491907 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
CCNB3-207ENST00000491907 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
CCNB3-207ENST00000491907 SETD1BQ9UPS6 1966 aaKnown RBP18.89■□□□□ 0.61
CCNB3-207ENST00000491907 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
CCNB3-207ENST00000491907 SIGLEC1Q9BZZ2 1709 aa18.87■□□□□ 0.61
CCNB3-207ENST00000491907 FRMPD1Q5SYB0 1578 aa18.86■□□□□ 0.61
CCNB3-207ENST00000491907 ARHGEF40Q8TER5 1519 aa18.85■□□□□ 0.61
CCNB3-207ENST00000491907 FANCAO15360 1455 aa18.84■□□□□ 0.61
CCNB3-207ENST00000491907 KIAA0556O60303 1618 aa18.81■□□□□ 0.6
CCNB3-207ENST00000491907 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
CCNB3-207ENST00000491907 PHLDB1Q86UU1 1377 aa18.77■□□□□ 0.6
CCNB3-207ENST00000491907 ALKQ9UM73 1620 aa18.77■□□□□ 0.6
CCNB3-207ENST00000491907 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
CCNB3-207ENST00000491907 CARMIL2Q6F5E8 1435 aa18.72■□□□□ 0.59
CCNB3-207ENST00000491907 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
CCNB3-207ENST00000491907 SETBP1Q9Y6X0 1596 aa18.7■□□□□ 0.58
CCNB3-207ENST00000491907 AKNAQ7Z591 1439 aa18.67■□□□□ 0.58
CCNB3-207ENST00000491907 CAMSAP1Q5T5Y3 1602 aa18.67■□□□□ 0.58
CCNB3-207ENST00000491907 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
CCNB3-207ENST00000491907 PTPRKQ15262 1439 aa18.65■□□□□ 0.58
CCNB3-207ENST00000491907 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms