RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 RRBP1Q9P2E9 1410 aaKnown RBP15.77■□□□□ 0.12
VPS72-205ENST00000491094 CUX1P39880 1505 aa15.77■□□□□ 0.11
VPS72-205ENST00000491094 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.11
VPS72-205ENST00000491094 SETD5Q9C0A6 1442 aa15.75■□□□□ 0.11
VPS72-205ENST00000491094 IGF1RP08069 1367 aa15.75■□□□□ 0.11
VPS72-205ENST00000491094 PHLDB1Q86UU1 1377 aa15.74■□□□□ 0.11
VPS72-205ENST00000491094 CHIC2Q9UKJ5 165 aa15.72■□□□□ 0.11
VPS72-205ENST00000491094 ERICH3Q5RHP9 1530 aa15.7■□□□□ 0.1
VPS72-205ENST00000491094 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
VPS72-205ENST00000491094 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
VPS72-205ENST00000491094 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
VPS72-205ENST00000491094 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
VPS72-205ENST00000491094 RRP7BPQ9NSQ0 103 aa15.66■□□□□ 0.1
VPS72-205ENST00000491094 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
VPS72-205ENST00000491094 WDR97A6NE52 1622 aa15.64■□□□□ 0.09
VPS72-205ENST00000491094 SENP3-EIF4A1A0A087X0R7 540 aa15.62■□□□□ 0.09
VPS72-205ENST00000491094 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
VPS72-205ENST00000491094 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
VPS72-205ENST00000491094 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
VPS72-205ENST00000491094 RBM19Q9Y4C8 960 aaKnown RBP15.6■□□□□ 0.09
VPS72-205ENST00000491094 LRRC9Q6ZRR7 1453 aa15.6■□□□□ 0.09
VPS72-205ENST00000491094 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
VPS72-205ENST00000491094 CFTRP13569 1480 aa15.59■□□□□ 0.09
VPS72-205ENST00000491094 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
VPS72-205ENST00000491094 FOXD1Q16676 465 aa15.57■□□□□ 0.08
VPS72-205ENST00000491094 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
VPS72-205ENST00000491094 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
VPS72-205ENST00000491094 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
VPS72-205ENST00000491094 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
VPS72-205ENST00000491094 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
VPS72-205ENST00000491094 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
VPS72-205ENST00000491094 CCER2I3L3R5 266 aa15.51■□□□□ 0.07
VPS72-205ENST00000491094 ERICH6Q7L0X2 663 aa15.51■□□□□ 0.07
VPS72-205ENST00000491094 TDRD9Q8NDG6 1382 aaKnown RBP15.5■□□□□ 0.07
VPS72-205ENST00000491094 HSPA5P11021 654 aaKnown RBP15.49■□□□□ 0.07
VPS72-205ENST00000491094 TIMELESSQ9UNS1 1208 aa15.49■□□□□ 0.07
VPS72-205ENST00000491094 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
VPS72-205ENST00000491094 CDK11AQ9UQ88 783 aaPredicted RBP15.47■□□□□ 0.07
VPS72-205ENST00000491094 CCDC184Q52MB2 194 aa15.46■□□□□ 0.07
VPS72-205ENST00000491094 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
VPS72-205ENST00000491094 MRS2Q9HD23 443 aa15.43■□□□□ 0.06
VPS72-205ENST00000491094 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
VPS72-205ENST00000491094 B4GALNT3Q6L9W6 998 aa15.41■□□□□ 0.06
VPS72-205ENST00000491094 CCDC18Q5T9S5 1454 aa15.41■□□□□ 0.06
VPS72-205ENST00000491094 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
VPS72-205ENST00000491094 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
VPS72-205ENST00000491094 FGD6Q6ZV73 1430 aa15.4■□□□□ 0.06
VPS72-205ENST00000491094 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
VPS72-205ENST00000491094 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
VPS72-205ENST00000491094 WASHC2AQ641Q2 1341 aa15.39■□□□□ 0.05
VPS72-205ENST00000491094 NESP48681 1621 aa15.37■□□□□ 0.05
VPS72-205ENST00000491094 C11orf95C9JLR9 678 aaPredicted RBP15.36■□□□□ 0.05
VPS72-205ENST00000491094 MSH5O43196 834 aa15.36■□□□□ 0.05
VPS72-205ENST00000491094 MPHOSPH9Q99550 1183 aa15.35■□□□□ 0.05
VPS72-205ENST00000491094 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
VPS72-205ENST00000491094 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
VPS72-205ENST00000491094 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.054e-7■■■□□ 16.5
VPS72-205ENST00000491094 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
VPS72-205ENST00000491094 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
VPS72-205ENST00000491094 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
VPS72-205ENST00000491094 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
VPS72-205ENST00000491094 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
VPS72-205ENST00000491094 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
VPS72-205ENST00000491094 SALL2Q9Y467 1007 aaPredicted RBP15.3■□□□□ 0.04
VPS72-205ENST00000491094 NAIPQ13075 1403 aa15.3■□□□□ 0.04
VPS72-205ENST00000491094 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
VPS72-205ENST00000491094 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
VPS72-205ENST00000491094 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
VPS72-205ENST00000491094 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
VPS72-205ENST00000491094 PRKRIP1Q9H875 184 aaPredicted RBP15.27■□□□□ 0.04
VPS72-205ENST00000491094 NBPF8Q3BBV2 869 aa15.27■□□□□ 0.04
VPS72-205ENST00000491094 HFM1A2PYH4 1435 aa15.27■□□□□ 0.03
VPS72-205ENST00000491094 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
VPS72-205ENST00000491094 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
VPS72-205ENST00000491094 NBR1Q14596 966 aa15.24■□□□□ 0.03
VPS72-205ENST00000491094 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
VPS72-205ENST00000491094 FBLN2P98095 1184 aa15.24■□□□□ 0.03
VPS72-205ENST00000491094 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
VPS72-205ENST00000491094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPS72-205ENST00000491094 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
VPS72-205ENST00000491094 CCDC136Q96JN2 1154 aa15.18■□□□□ 0.02
VPS72-205ENST00000491094 KIF7Q2M1P5 1343 aa15.18■□□□□ 0.02
VPS72-205ENST00000491094 CCDC7Q96M83 1385 aa15.17■□□□□ 0.02
VPS72-205ENST00000491094 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
VPS72-205ENST00000491094 PTPN23Q9H3S7 1636 aa15.16■□□□□ 0.02
VPS72-205ENST00000491094 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
VPS72-205ENST00000491094 TMC1Q8TDI8 760 aa15.16■□□□□ 0.02
VPS72-205ENST00000491094 CFAP43Q8NDM7 1665 aa15.15■□□□□ 0.02
VPS72-205ENST00000491094 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
VPS72-205ENST00000491094 EFCAB5A4FU69 1503 aa15.14■□□□□ 0.01
VPS72-205ENST00000491094 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
VPS72-205ENST00000491094 CFDP1Q9UEE9 299 aaPredicted RBP15.13■□□□□ 0.01
VPS72-205ENST00000491094 CNTLNQ9NXG0 1405 aa15.13■□□□□ 0.01
VPS72-205ENST00000491094 PKD2Q13563 968 aa15.12■□□□□ 0.01
VPS72-205ENST00000491094 DNMBPQ6XZF7 1577 aa15.12■□□□□ 0.01
VPS72-205ENST00000491094 FANCIQ9NVI1 1328 aa15.11■□□□□ 0.01
VPS72-205ENST00000491094 ZBED9Q6R2W3 1325 aa15.1■□□□□ 0.01
VPS72-205ENST00000491094 CDK13Q14004 1512 aaKnown RBP15.1■□□□□ 0.01
VPS72-205ENST00000491094 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
VPS72-205ENST00000491094 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms