RNA–Protein interactions for RNA: ENST00000490905.5

CAMTA1-214, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 1 (best)

Gene CAMTA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-214ENST00000490905 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
CAMTA1-214ENST00000490905 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
CAMTA1-214ENST00000490905 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
CAMTA1-214ENST00000490905 APLP2Q06481 763 aa11.42□□□□□ -0.58
CAMTA1-214ENST00000490905 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
CAMTA1-214ENST00000490905 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.58
CAMTA1-214ENST00000490905 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
CAMTA1-214ENST00000490905 ARHGAP35Q9NRY4 1499 aa11.4□□□□□ -0.58
CAMTA1-214ENST00000490905 CENPBP07199 599 aaPredicted RBP11.4□□□□□ -0.58
CAMTA1-214ENST00000490905 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
CAMTA1-214ENST00000490905 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
CAMTA1-214ENST00000490905 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
CAMTA1-214ENST00000490905 DCAF8L1A6NGE4 600 aa11.36□□□□□ -0.59
CAMTA1-214ENST00000490905 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
CAMTA1-214ENST00000490905 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
CAMTA1-214ENST00000490905 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
CAMTA1-214ENST00000490905 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
CAMTA1-214ENST00000490905 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
CAMTA1-214ENST00000490905 HOXD11P31277 338 aaPredicted RBP11.32□□□□□ -0.6
CAMTA1-214ENST00000490905 CUL7Q14999 1698 aa11.32□□□□□ -0.6
CAMTA1-214ENST00000490905 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
CAMTA1-214ENST00000490905 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
CAMTA1-214ENST00000490905 KANK4Q5T7N3 995 aaPredicted RBP11.31□□□□□ -0.6
CAMTA1-214ENST00000490905 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
CAMTA1-214ENST00000490905 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
CAMTA1-214ENST00000490905 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
CAMTA1-214ENST00000490905 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
CAMTA1-214ENST00000490905 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
CAMTA1-214ENST00000490905 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
CAMTA1-214ENST00000490905 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
CAMTA1-214ENST00000490905 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
CAMTA1-214ENST00000490905 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
CAMTA1-214ENST00000490905 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
CAMTA1-214ENST00000490905 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
CAMTA1-214ENST00000490905 MIER1Q8N108 512 aa11.23□□□□□ -0.61
CAMTA1-214ENST00000490905 YTHDC1Q96MU7 727 aaKnown RBP11.23□□□□□ -0.61
CAMTA1-214ENST00000490905 PCF11O94913 1555 aaKnown RBP11.21□□□□□ -0.61
CAMTA1-214ENST00000490905 CFAP43Q8NDM7 1665 aa11.21□□□□□ -0.62
CAMTA1-214ENST00000490905 FHOD3Q2V2M9 1422 aa11.2□□□□□ -0.62
CAMTA1-214ENST00000490905 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
CAMTA1-214ENST00000490905 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
CAMTA1-214ENST00000490905 P3H3Q8IVL6 736 aa11.18□□□□□ -0.62
CAMTA1-214ENST00000490905 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
CAMTA1-214ENST00000490905 MRC2Q9UBG0 1479 aa11.18□□□□□ -0.62
CAMTA1-214ENST00000490905 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.62
CAMTA1-214ENST00000490905 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
CAMTA1-214ENST00000490905 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
CAMTA1-214ENST00000490905 CASKIN1Q8WXD9 1431 aa11.17□□□□□ -0.62
CAMTA1-214ENST00000490905 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
CAMTA1-214ENST00000490905 FMN1Q68DA7 1419 aa11.14□□□□□ -0.63
CAMTA1-214ENST00000490905 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
CAMTA1-214ENST00000490905 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
CAMTA1-214ENST00000490905 CLSPNQ9HAW4 1339 aa11.13□□□□□ -0.63
CAMTA1-214ENST00000490905 DHX57Q6P158 1386 aaKnown RBP11.13□□□□□ -0.63
CAMTA1-214ENST00000490905 PHLDB1Q86UU1 1377 aa11.13□□□□□ -0.63
CAMTA1-214ENST00000490905 WDR62O43379 1518 aa11.12□□□□□ -0.63
CAMTA1-214ENST00000490905 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
CAMTA1-214ENST00000490905 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
CAMTA1-214ENST00000490905 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
CAMTA1-214ENST00000490905 ATP1B4Q9UN42 357 aaPredicted RBP11.1□□□□□ -0.63
CAMTA1-214ENST00000490905 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
CAMTA1-214ENST00000490905 MYT1Q01538 1121 aa11.09□□□□□ -0.63
CAMTA1-214ENST00000490905 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
CAMTA1-214ENST00000490905 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
CAMTA1-214ENST00000490905 ITGAEP38570 1179 aa11.07□□□□□ -0.64
CAMTA1-214ENST00000490905 IQGAP2Q13576 1575 aa11.07□□□□□ -0.64
CAMTA1-214ENST00000490905 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
CAMTA1-214ENST00000490905 ZNF608Q9ULD9 1512 aaPredicted RBP11.07□□□□□ -0.64
CAMTA1-214ENST00000490905 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
CAMTA1-214ENST00000490905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
CAMTA1-214ENST00000490905 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
CAMTA1-214ENST00000490905 ERCC6Q03468 1493 aa11.03□□□□□ -0.64
CAMTA1-214ENST00000490905 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
CAMTA1-214ENST00000490905 FAM50AQ14320 339 aaKnown RBP11.02□□□□□ -0.64
CAMTA1-214ENST00000490905 SETD5Q9C0A6 1442 aa11.02□□□□□ -0.64
CAMTA1-214ENST00000490905 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
CAMTA1-214ENST00000490905 SLC24A1O60721 1099 aa11□□□□□ -0.65
CAMTA1-214ENST00000490905 EHBP1L1Q8N3D4 1523 aa11□□□□□ -0.65
CAMTA1-214ENST00000490905 UGGT2Q9NYU1 1516 aa11□□□□□ -0.65
CAMTA1-214ENST00000490905 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
CAMTA1-214ENST00000490905 SUPT6HQ7KZ85 1726 aaKnown RBP11□□□□□ -0.65
CAMTA1-214ENST00000490905 MAPKBP1O60336 1514 aa10.99□□□□□ -0.65
CAMTA1-214ENST00000490905 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
CAMTA1-214ENST00000490905 NCOA2Q15596 1464 aa10.99□□□□□ -0.65
CAMTA1-214ENST00000490905 GRIN2AQ12879 1464 aa10.98□□□□□ -0.65
CAMTA1-214ENST00000490905 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
CAMTA1-214ENST00000490905 MAGI3Q5TCQ9 1506 aa10.97□□□□□ -0.65
CAMTA1-214ENST00000490905 ARHGEF11O15085 1522 aa10.97□□□□□ -0.65
CAMTA1-214ENST00000490905 MYOM3Q5VTT5 1437 aa10.97□□□□□ -0.65
CAMTA1-214ENST00000490905 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.65
CAMTA1-214ENST00000490905 EPRSP07814 1512 aaKnown RBP10.96□□□□□ -0.66
CAMTA1-214ENST00000490905 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.66
CAMTA1-214ENST00000490905 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
CAMTA1-214ENST00000490905 DISP1Q96F81 1524 aa10.95□□□□□ -0.66
CAMTA1-214ENST00000490905 CDK13Q14004 1512 aaKnown RBP10.93□□□□□ -0.66
CAMTA1-214ENST00000490905 PTPN23Q9H3S7 1636 aa10.92□□□□□ -0.66
CAMTA1-214ENST00000490905 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
CAMTA1-214ENST00000490905 SYNJ2O15056 1496 aa10.92□□□□□ -0.66
CAMTA1-214ENST00000490905 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
CAMTA1-214ENST00000490905 CEP170Q5SW79 1584 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms