RNA–Protein interactions for RNA: ENST00000490905.5

CAMTA1-214, Transcript of calmodulin binding transcription activator 1, humanhuman

TSL 1 (best)

Gene CAMTA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA1-214ENST00000490905 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
CAMTA1-214ENST00000490905 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
CAMTA1-214ENST00000490905 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
CAMTA1-214ENST00000490905 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
CAMTA1-214ENST00000490905 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
CAMTA1-214ENST00000490905 FOXD1Q16676 465 aa14.07□□□□□ -0.16
CAMTA1-214ENST00000490905 CCDC180Q9P1Z9 1646 aa13.92□□□□□ -0.18
CAMTA1-214ENST00000490905 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
CAMTA1-214ENST00000490905 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
CAMTA1-214ENST00000490905 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
CAMTA1-214ENST00000490905 DCAF1Q9Y4B6 1507 aa13.34□□□□□ -0.27
CAMTA1-214ENST00000490905 PLPPR3Q6T4P5 718 aa13.31□□□□□ -0.28
CAMTA1-214ENST00000490905 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
CAMTA1-214ENST00000490905 MSH5O43196 834 aa13.24□□□□□ -0.29
CAMTA1-214ENST00000490905 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
CAMTA1-214ENST00000490905 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
CAMTA1-214ENST00000490905 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.33
CAMTA1-214ENST00000490905 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
CAMTA1-214ENST00000490905 ABCC9O60706 1549 aa12.92□□□□□ -0.34
CAMTA1-214ENST00000490905 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
CAMTA1-214ENST00000490905 NACADO15069 1562 aa12.89□□□□□ -0.35
CAMTA1-214ENST00000490905 ADRA2BP18089 450 aa12.86□□□□□ -0.35
CAMTA1-214ENST00000490905 RB1CC1Q8TDY2 1594 aa12.7□□□□□ -0.38
CAMTA1-214ENST00000490905 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
CAMTA1-214ENST00000490905 HRCP23327 699 aa12.6□□□□□ -0.39
CAMTA1-214ENST00000490905 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
CAMTA1-214ENST00000490905 EHMT2Q96KQ7 1210 aa12.57□□□□□ -0.4
CAMTA1-214ENST00000490905 KCNA4P22459 653 aa12.53□□□□□ -0.4
CAMTA1-214ENST00000490905 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
CAMTA1-214ENST00000490905 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
CAMTA1-214ENST00000490905 WIZO95785 1651 aa12.46□□□□□ -0.42
CAMTA1-214ENST00000490905 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
CAMTA1-214ENST00000490905 PCGF6Q9BYE7 350 aa12.42□□□□□ -0.42
CAMTA1-214ENST00000490905 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
CAMTA1-214ENST00000490905 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
CAMTA1-214ENST00000490905 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
CAMTA1-214ENST00000490905 TOP2AP11388 1531 aaKnown RBP12.29□□□□□ -0.44
CAMTA1-214ENST00000490905 TRIM41Q8WV44 630 aa12.29□□□□□ -0.44
CAMTA1-214ENST00000490905 LOC105371045A0A1W2PR82 267 aa12.28□□□□□ -0.44
CAMTA1-214ENST00000490905 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAMTA1-214ENST00000490905 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
CAMTA1-214ENST00000490905 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
CAMTA1-214ENST00000490905 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
CAMTA1-214ENST00000490905 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
CAMTA1-214ENST00000490905 TRIM26Q12899 539 aaPredicted RBP12.14□□□□□ -0.47
CAMTA1-214ENST00000490905 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
CAMTA1-214ENST00000490905 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
CAMTA1-214ENST00000490905 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
CAMTA1-214ENST00000490905 BAZ1BQ9UIG0 1483 aaKnown RBP12.03□□□□□ -0.48
CAMTA1-214ENST00000490905 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
CAMTA1-214ENST00000490905 ZEB1P37275 1124 aaPredicted RBP11.93□□□□□ -0.5
CAMTA1-214ENST00000490905 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
CAMTA1-214ENST00000490905 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
CAMTA1-214ENST00000490905 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
CAMTA1-214ENST00000490905 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
CAMTA1-214ENST00000490905 SOGA1O94964 1423 aa11.91□□□□□ -0.5
CAMTA1-214ENST00000490905 NCAPD3P42695 1498 aa11.91□□□□□ -0.5
CAMTA1-214ENST00000490905 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
CAMTA1-214ENST00000490905 EEA1Q15075 1411 aa11.89□□□□□ -0.51
CAMTA1-214ENST00000490905 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
CAMTA1-214ENST00000490905 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
CAMTA1-214ENST00000490905 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
CAMTA1-214ENST00000490905 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
CAMTA1-214ENST00000490905 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
CAMTA1-214ENST00000490905 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
CAMTA1-214ENST00000490905 GOLGA3Q08378 1498 aa11.77□□□□□ -0.53
CAMTA1-214ENST00000490905 BIVM-ERCC5R4GMW8 1640 aa11.77□□□□□ -0.53
CAMTA1-214ENST00000490905 KIF21BO75037 1637 aa11.75□□□□□ -0.53
CAMTA1-214ENST00000490905 CFTRP13569 1480 aa11.75□□□□□ -0.53
CAMTA1-214ENST00000490905 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
CAMTA1-214ENST00000490905 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
CAMTA1-214ENST00000490905 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
CAMTA1-214ENST00000490905 PRDM2Q13029 1718 aa11.71□□□□□ -0.53
CAMTA1-214ENST00000490905 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
CAMTA1-214ENST00000490905 CUX1P39880 1505 aa11.69□□□□□ -0.54
CAMTA1-214ENST00000490905 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
CAMTA1-214ENST00000490905 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
CAMTA1-214ENST00000490905 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
CAMTA1-214ENST00000490905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
CAMTA1-214ENST00000490905 CADPSQ9ULU8 1353 aa11.63□□□□□ -0.55
CAMTA1-214ENST00000490905 ZBTB22O15209 634 aa11.62□□□□□ -0.55
CAMTA1-214ENST00000490905 CLIP1P30622 1438 aa11.61□□□□□ -0.55
CAMTA1-214ENST00000490905 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
CAMTA1-214ENST00000490905 PRXQ9BXM0 1461 aa11.6□□□□□ -0.55
CAMTA1-214ENST00000490905 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
CAMTA1-214ENST00000490905 CCER1Q8TC90 406 aaPredicted RBP11.59□□□□□ -0.55
CAMTA1-214ENST00000490905 KIF27Q86VH2 1401 aa11.58□□□□□ -0.56
CAMTA1-214ENST00000490905 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
CAMTA1-214ENST00000490905 VPS8Q8N3P4 1428 aa11.55□□□□□ -0.56
CAMTA1-214ENST00000490905 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
CAMTA1-214ENST00000490905 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
CAMTA1-214ENST00000490905 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
CAMTA1-214ENST00000490905 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.57
CAMTA1-214ENST00000490905 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
CAMTA1-214ENST00000490905 CUX2O14529 1486 aa11.49□□□□□ -0.57
CAMTA1-214ENST00000490905 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
CAMTA1-214ENST00000490905 RANGAP1P46060 587 aaPredicted RBP11.47□□□□□ -0.57
CAMTA1-214ENST00000490905 NESP48681 1621 aa11.46□□□□□ -0.57
CAMTA1-214ENST00000490905 DNMBPQ6XZF7 1577 aa11.46□□□□□ -0.57
CAMTA1-214ENST00000490905 IGF1RP08069 1367 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms