RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-210ENST00000490668 PRDM2Q13029 1718 aa7.57□□□□□ -1.2
SFPQ-210ENST00000490668 CEP164Q9UPV0 1460 aa7.55□□□□□ -1.2
SFPQ-210ENST00000490668 KIF21AQ7Z4S6 1674 aa7.54□□□□□ -1.2
SFPQ-210ENST00000490668 NBR1Q14596 966 aa7.54□□□□□ -1.2
SFPQ-210ENST00000490668 SPRYD3Q8NCJ5 442 aa7.54□□□□□ -1.2
SFPQ-210ENST00000490668 FANCD2Q9BXW9 1451 aa7.54□□□□□ -1.2
SFPQ-210ENST00000490668 MSH5O43196 834 aa7.53□□□□□ -1.2
SFPQ-210ENST00000490668 THOC2Q8NI27 1593 aaKnown RBP7.52□□□□□ -1.21
SFPQ-210ENST00000490668 C14orf37Q86TY3 774 aa7.52□□□□□ -1.21
SFPQ-210ENST00000490668 MRC2Q9UBG0 1479 aa7.51□□□□□ -1.21
SFPQ-210ENST00000490668 CUX2O14529 1486 aa7.49□□□□□ -1.21
SFPQ-210ENST00000490668 WDR62O43379 1518 aa7.49□□□□□ -1.21
SFPQ-210ENST00000490668 ECM2O94769 699 aaPredicted RBP7.49□□□□□ -1.21
SFPQ-210ENST00000490668 RGL2O15211 777 aa7.47□□□□□ -1.21
SFPQ-210ENST00000490668 MKRN4PQ13434 485 aaPredicted RBP7.46□□□□□ -1.22
SFPQ-210ENST00000490668 ZNF219Q9P2Y4 722 aaPredicted RBP7.46□□□□□ -1.22
SFPQ-210ENST00000490668 SAMD1Q6SPF0 538 aaPredicted RBP7.45□□□□□ -1.22
SFPQ-210ENST00000490668 URB2Q14146 1524 aaKnown RBP7.44□□□□□ -1.22
SFPQ-210ENST00000490668 ABCC8Q09428 1581 aa7.44□□□□□ -1.22
SFPQ-210ENST00000490668 DNMBPQ6XZF7 1577 aa7.44□□□□□ -1.22
SFPQ-210ENST00000490668 TOPBP1Q92547 1522 aa7.42□□□□□ -1.22
SFPQ-210ENST00000490668 POTEDQ86YR6 584 aa7.41□□□□□ -1.22
SFPQ-210ENST00000490668 SPOCK2Q92563 424 aa7.41□□□□□ -1.22
SFPQ-210ENST00000490668 PODXL2Q9NZ53 605 aa7.41□□□□□ -1.22
SFPQ-210ENST00000490668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.4□□□□□ -1.22
SFPQ-210ENST00000490668 HNRNPUL2Q1KMD3 747 aaKnown RBP7.4□□□□□ -1.22
SFPQ-210ENST00000490668 CUX1P39880 1505 aa7.38□□□□□ -1.23
SFPQ-210ENST00000490668 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
SFPQ-210ENST00000490668 U3KPZ7 1027 aaPredicted RBP7.38□□□□□ -1.23
SFPQ-210ENST00000490668 IFT140Q96RY7 1462 aa7.37□□□□□ -1.23
SFPQ-210ENST00000490668 BIVM-ERCC5R4GMW8 1640 aa7.37□□□□□ -1.23
SFPQ-210ENST00000490668 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
SFPQ-210ENST00000490668 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
SFPQ-210ENST00000490668 RANGAP1P46060 587 aaPredicted RBP7.36□□□□□ -1.23
SFPQ-210ENST00000490668 TOP2BQ02880 1626 aa7.36□□□□□ -1.23
SFPQ-210ENST00000490668 SYNJ1O43426 1573 aa7.35□□□□□ -1.23
SFPQ-210ENST00000490668 CHGAP10645 457 aaKnown RBP7.35□□□□□ -1.23
SFPQ-210ENST00000490668 WDR97A6NE52 1622 aa7.33□□□□□ -1.24
SFPQ-210ENST00000490668 TARBP1Q13395 1621 aaKnown RBP7.33□□□□□ -1.24
SFPQ-210ENST00000490668 EIF4G3O43432 1585 aaKnown RBP7.33□□□□□ -1.24
SFPQ-210ENST00000490668 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
SFPQ-210ENST00000490668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.244e-12■□□□□ 10
SFPQ-210ENST00000490668 SOGA1O94964 1423 aa7.31□□□□□ -1.24
SFPQ-210ENST00000490668 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
SFPQ-210ENST00000490668 ZNF608Q9ULD9 1512 aaPredicted RBP7.3□□□□□ -1.24
SFPQ-210ENST00000490668 RAD54L2Q9Y4B4 1467 aa7.3□□□□□ -1.24
SFPQ-210ENST00000490668 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
SFPQ-210ENST00000490668 HS6ST3Q8IZP7 471 aa7.26□□□□□ -1.25
SFPQ-210ENST00000490668 PBRM1Q86U86 1689 aa7.25□□□□□ -1.25
SFPQ-210ENST00000490668 GRIN2BQ13224 1484 aa7.25□□□□□ -1.25
SFPQ-210ENST00000490668 UBTFP17480 764 aaKnown RBP7.25□□□□□ -1.25
SFPQ-210ENST00000490668 BRPF1P55201 1214 aaPredicted RBP7.25□□□□□ -1.25
SFPQ-210ENST00000490668 AQRO60306 1485 aaKnown RBP eCLIP7.24□□□□□ -1.257e-6■■□□□ 12.2
SFPQ-210ENST00000490668 GAPVD1Q14C86 1478 aa7.24□□□□□ -1.25
SFPQ-210ENST00000490668 MAGI1Q96QZ7 1491 aaPredicted RBP7.24□□□□□ -1.25
SFPQ-210ENST00000490668 TDRD9Q8NDG6 1382 aaKnown RBP7.24□□□□□ -1.25
SFPQ-210ENST00000490668 SNAPC4Q5SXM2 1469 aa7.24□□□□□ -1.25
SFPQ-210ENST00000490668 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
SFPQ-210ENST00000490668 NKX1-1Q15270 411 aaPredicted RBP7.23□□□□□ -1.25
SFPQ-210ENST00000490668 ERICH3Q5RHP9 1530 aa7.22□□□□□ -1.25
SFPQ-210ENST00000490668 KIF27Q86VH2 1401 aa7.22□□□□□ -1.25
SFPQ-210ENST00000490668 ADAMTS12P58397 1594 aa7.21□□□□□ -1.25
SFPQ-210ENST00000490668 TRIM41Q8WV44 630 aa7.21□□□□□ -1.26
SFPQ-210ENST00000490668 SYNJ2O15056 1496 aa7.2□□□□□ -1.26
SFPQ-210ENST00000490668 CUL7Q14999 1698 aa7.19□□□□□ -1.26
SFPQ-210ENST00000490668 CHD1O14646 1710 aa7.19□□□□□ -1.26
SFPQ-210ENST00000490668 GTPBP6O43824 516 aaPredicted RBP7.19□□□□□ -1.26
SFPQ-210ENST00000490668 HRCP23327 699 aa7.19□□□□□ -1.26
SFPQ-210ENST00000490668 NPM2Q86SE8 214 aaKnown RBP7.18□□□□□ -1.26
SFPQ-210ENST00000490668 FHAD1B1AJZ9 1412 aa7.18□□□□□ -1.26
SFPQ-210ENST00000490668 TRHP20396 242 aaPredicted RBP7.17□□□□□ -1.26
SFPQ-210ENST00000490668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.16□□□□□ -1.26
SFPQ-210ENST00000490668 GRIN2AQ12879 1464 aa7.16□□□□□ -1.26
SFPQ-210ENST00000490668 DCAF8L1A6NGE4 600 aa7.15□□□□□ -1.26
SFPQ-210ENST00000490668 LMOD2Q6P5Q4 547 aa7.15□□□□□ -1.26
SFPQ-210ENST00000490668 CHMP7Q8WUX9 453 aaPredicted RBP7.15□□□□□ -1.26
SFPQ-210ENST00000490668 RNF25Q96BH1 459 aaPredicted RBP7.15□□□□□ -1.26
SFPQ-210ENST00000490668 CIZ1Q9ULV3 898 aaPredicted RBP7.15□□□□□ -1.26
SFPQ-210ENST00000490668 EEA1Q15075 1411 aa7.15□□□□□ -1.27
SFPQ-210ENST00000490668 OSCARQ8IYS5 282 aa7.13□□□□□ -1.27
SFPQ-210ENST00000490668 PLCD3Q8N3E9 789 aa7.13□□□□□ -1.27
SFPQ-210ENST00000490668 STAG3Q9UJ98 1225 aa7.13□□□□□ -1.27
SFPQ-210ENST00000490668 CLASP1Q7Z460 1538 aa7.12□□□□□ -1.27
SFPQ-210ENST00000490668 CEP170Q5SW79 1584 aa7.12□□□□□ -1.27
SFPQ-210ENST00000490668 RUSC2Q8N2Y8 1516 aa7.11□□□□□ -1.27
SFPQ-210ENST00000490668 NUP160Q12769 1436 aa7.11□□□□□ -1.27
SFPQ-210ENST00000490668 IGF1RP08069 1367 aa7.11□□□□□ -1.27
SFPQ-210ENST00000490668 APLP2Q06481 763 aa7.11□□□□□ -1.27
SFPQ-210ENST00000490668 CARMIL1Q5VZK9 1371 aa7.1□□□□□ -1.27
SFPQ-210ENST00000490668 RAPGEF2Q9Y4G8 1499 aa7.1□□□□□ -1.27
SFPQ-210ENST00000490668 NEUROD2Q15784 382 aa7.09□□□□□ -1.27
SFPQ-210ENST00000490668 PRXQ9BXM0 1461 aa7.08□□□□□ -1.28
SFPQ-210ENST00000490668 P3H3Q8IVL6 736 aa7.07□□□□□ -1.28
SFPQ-210ENST00000490668 KIF21BO75037 1637 aa7.07□□□□□ -1.28
SFPQ-210ENST00000490668 ARHGEF11O15085 1522 aa7.06□□□□□ -1.28
SFPQ-210ENST00000490668 CTTNBP2Q8WZ74 1663 aa7.06□□□□□ -1.28
SFPQ-210ENST00000490668 SHROOM2Q13796 1616 aa7.06□□□□□ -1.28
SFPQ-210ENST00000490668 MIER1Q8N108 512 aa7.06□□□□□ -1.28
SFPQ-210ENST00000490668 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
SFPQ-210ENST00000490668 KIAA0586Q9BVV6 1533 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms