RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
ABCD4-214ENST00000489678 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
ABCD4-214ENST00000489678 TNIKQ9UKE5 1360 aa16.06■□□□□ 0.16
ABCD4-214ENST00000489678 JPH4Q96JJ6 628 aa16.05■□□□□ 0.16
ABCD4-214ENST00000489678 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
ABCD4-214ENST00000489678 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
ABCD4-214ENST00000489678 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
ABCD4-214ENST00000489678 ITGAEP38570 1179 aa16■□□□□ 0.15
ABCD4-214ENST00000489678 GRIN2AQ12879 1464 aa16■□□□□ 0.15
ABCD4-214ENST00000489678 KANK4Q5T7N3 995 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-214ENST00000489678 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
ABCD4-214ENST00000489678 APLP2Q06481 763 aa15.98■□□□□ 0.15
ABCD4-214ENST00000489678 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
ABCD4-214ENST00000489678 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
ABCD4-214ENST00000489678 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
ABCD4-214ENST00000489678 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
ABCD4-214ENST00000489678 SYNJ2O15056 1496 aa15.96■□□□□ 0.15
ABCD4-214ENST00000489678 KIF21BO75037 1637 aa15.96■□□□□ 0.15
ABCD4-214ENST00000489678 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
ABCD4-214ENST00000489678 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
ABCD4-214ENST00000489678 MYT1Q01538 1121 aa15.92■□□□□ 0.14
ABCD4-214ENST00000489678 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
ABCD4-214ENST00000489678 CHD1O14646 1710 aa15.91■□□□□ 0.14
ABCD4-214ENST00000489678 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
ABCD4-214ENST00000489678 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
ABCD4-214ENST00000489678 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
ABCD4-214ENST00000489678 CUL7Q14999 1698 aa15.86■□□□□ 0.13
ABCD4-214ENST00000489678 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
ABCD4-214ENST00000489678 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
ABCD4-214ENST00000489678 KIAA0586Q9BVV6 1533 aa15.79■□□□□ 0.12
ABCD4-214ENST00000489678 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
ABCD4-214ENST00000489678 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
ABCD4-214ENST00000489678 NUP160Q12769 1436 aa15.76■□□□□ 0.11
ABCD4-214ENST00000489678 FAM50AQ14320 339 aaKnown RBP15.76■□□□□ 0.11
ABCD4-214ENST00000489678 DISP1Q96F81 1524 aa15.76■□□□□ 0.11
ABCD4-214ENST00000489678 PTPRGP23470 1445 aa15.74■□□□□ 0.11
ABCD4-214ENST00000489678 CDK13Q14004 1512 aaKnown RBP15.74■□□□□ 0.11
ABCD4-214ENST00000489678 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
ABCD4-214ENST00000489678 PCF11O94913 1555 aaKnown RBP15.69■□□□□ 0.1
ABCD4-214ENST00000489678 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
ABCD4-214ENST00000489678 ZEB1P37275 1124 aaPredicted RBP15.69■□□□□ 0.1
ABCD4-214ENST00000489678 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
ABCD4-214ENST00000489678 MTUS2Q5JR59 1369 aa15.67■□□□□ 0.1
ABCD4-214ENST00000489678 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
ABCD4-214ENST00000489678 KIAA0556O60303 1618 aa15.63■□□□□ 0.09
ABCD4-214ENST00000489678 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
ABCD4-214ENST00000489678 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
ABCD4-214ENST00000489678 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
ABCD4-214ENST00000489678 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
ABCD4-214ENST00000489678 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
ABCD4-214ENST00000489678 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
ABCD4-214ENST00000489678 NUP153P49790 1475 aaKnown RBP15.57■□□□□ 0.08
ABCD4-214ENST00000489678 SAMD9Q5K651 1589 aa15.56■□□□□ 0.08
ABCD4-214ENST00000489678 ARHGEF11O15085 1522 aa15.55■□□□□ 0.08
ABCD4-214ENST00000489678 MYT1LQ9UL68 1186 aa15.55■□□□□ 0.08
ABCD4-214ENST00000489678 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
ABCD4-214ENST00000489678 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
ABCD4-214ENST00000489678 MAGI3Q5TCQ9 1506 aa15.53■□□□□ 0.08
ABCD4-214ENST00000489678 EPRSP07814 1512 aaKnown RBP15.53■□□□□ 0.08
ABCD4-214ENST00000489678 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.07
ABCD4-214ENST00000489678 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
ABCD4-214ENST00000489678 RRP7BPQ9NSQ0 103 aa15.51■□□□□ 0.07
ABCD4-214ENST00000489678 ATP10BO94823 1461 aa15.5■□□□□ 0.07
ABCD4-214ENST00000489678 CCER1Q8TC90 406 aaPredicted RBP15.5■□□□□ 0.07
ABCD4-214ENST00000489678 LRRIQ1Q96JM4 1722 aa15.5■□□□□ 0.07
ABCD4-214ENST00000489678 HNRNPMP52272 730 aaKnown RBP eCLIP15.49■□□□□ 0.07
ABCD4-214ENST00000489678 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
ABCD4-214ENST00000489678 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
ABCD4-214ENST00000489678 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
ABCD4-214ENST00000489678 FAM69CQ0P6D2 419 aa15.46■□□□□ 0.06
ABCD4-214ENST00000489678 TIAM1Q13009 1591 aa15.45■□□□□ 0.06
ABCD4-214ENST00000489678 FYCO1Q9BQS8 1478 aa15.45■□□□□ 0.06
ABCD4-214ENST00000489678 RAPGEF6Q8TEU7 1601 aa15.45■□□□□ 0.06
ABCD4-214ENST00000489678 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
ABCD4-214ENST00000489678 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
ABCD4-214ENST00000489678 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
ABCD4-214ENST00000489678 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
ABCD4-214ENST00000489678 NCOA2Q15596 1464 aa15.41■□□□□ 0.06
ABCD4-214ENST00000489678 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
ABCD4-214ENST00000489678 DNAJC5Q9H3Z4 198 aa15.4■□□□□ 0.06
ABCD4-214ENST00000489678 KIF14Q15058 1648 aa15.39■□□□□ 0.05
ABCD4-214ENST00000489678 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
ABCD4-214ENST00000489678 AFAP1Q8N556 730 aa15.38■□□□□ 0.05
ABCD4-214ENST00000489678 RAPGEF3O95398 923 aa15.37■□□□□ 0.05
ABCD4-214ENST00000489678 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
ABCD4-214ENST00000489678 ADCY10Q96PN6 1610 aa15.37■□□□□ 0.05
ABCD4-214ENST00000489678 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
ABCD4-214ENST00000489678 ASXL2Q76L83 1435 aa15.36■□□□□ 0.05
ABCD4-214ENST00000489678 ABCC2Q92887 1545 aa15.36■□□□□ 0.05
ABCD4-214ENST00000489678 ABCA8O94911 1581 aa15.35■□□□□ 0.05
ABCD4-214ENST00000489678 FOXD1Q16676 465 aa15.34■□□□□ 0.05
ABCD4-214ENST00000489678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.046e-10■■■□□ 17.2
ABCD4-214ENST00000489678 TROQ12816 1431 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-214ENST00000489678 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
ABCD4-214ENST00000489678 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
ABCD4-214ENST00000489678 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
ABCD4-214ENST00000489678 ZCCHC11Q5TAX3 1644 aaKnown RBP15.29■□□□□ 0.04
ABCD4-214ENST00000489678 FGD6Q6ZV73 1430 aa15.28■□□□□ 0.04
ABCD4-214ENST00000489678 MLECQ14165 292 aa15.27■□□□□ 0.03
ABCD4-214ENST00000489678 MYOM3Q5VTT5 1437 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms