RNA–Protein interactions for RNA: ENST00000488351.1

VEGFD-202, Transcript of vascular endothelial growth factor D, humanhuman

TSL 2

Gene VEGFD, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-202ENST00000488351 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
VEGFD-202ENST00000488351 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
VEGFD-202ENST00000488351 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
VEGFD-202ENST00000488351 CARMIL1Q5VZK9 1371 aa13.47□□□□□ -0.25
VEGFD-202ENST00000488351 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.26
VEGFD-202ENST00000488351 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
VEGFD-202ENST00000488351 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
VEGFD-202ENST00000488351 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
VEGFD-202ENST00000488351 CLIP1P30622 1438 aa13.4□□□□□ -0.26
VEGFD-202ENST00000488351 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
VEGFD-202ENST00000488351 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
VEGFD-202ENST00000488351 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
VEGFD-202ENST00000488351 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
VEGFD-202ENST00000488351 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
VEGFD-202ENST00000488351 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
VEGFD-202ENST00000488351 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
VEGFD-202ENST00000488351 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
VEGFD-202ENST00000488351 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
VEGFD-202ENST00000488351 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
VEGFD-202ENST00000488351 APLP2Q06481 763 aa13.28□□□□□ -0.28
VEGFD-202ENST00000488351 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
VEGFD-202ENST00000488351 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.28
VEGFD-202ENST00000488351 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
VEGFD-202ENST00000488351 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
VEGFD-202ENST00000488351 SNAPC4Q5SXM2 1469 aa13.22□□□□□ -0.29
VEGFD-202ENST00000488351 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
VEGFD-202ENST00000488351 SYNJ2O15056 1496 aa13.21□□□□□ -0.3
VEGFD-202ENST00000488351 ARAP1Q96P48 1450 aa13.21□□□□□ -0.3
VEGFD-202ENST00000488351 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
VEGFD-202ENST00000488351 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
VEGFD-202ENST00000488351 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
VEGFD-202ENST00000488351 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
VEGFD-202ENST00000488351 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
VEGFD-202ENST00000488351 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
VEGFD-202ENST00000488351 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
VEGFD-202ENST00000488351 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
VEGFD-202ENST00000488351 PCGF6Q9BYE7 350 aa13.13□□□□□ -0.31
VEGFD-202ENST00000488351 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
VEGFD-202ENST00000488351 FYCO1Q9BQS8 1478 aa13.11□□□□□ -0.31
VEGFD-202ENST00000488351 NUP160Q12769 1436 aa13.09□□□□□ -0.31
VEGFD-202ENST00000488351 CASKIN1Q8WXD9 1431 aa13.08□□□□□ -0.32
VEGFD-202ENST00000488351 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
VEGFD-202ENST00000488351 CARMIL2Q6F5E8 1435 aa13.06□□□□□ -0.32
VEGFD-202ENST00000488351 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
VEGFD-202ENST00000488351 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
VEGFD-202ENST00000488351 FBLN2P98095 1184 aa13.04□□□□□ -0.32
VEGFD-202ENST00000488351 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
VEGFD-202ENST00000488351 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
VEGFD-202ENST00000488351 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
VEGFD-202ENST00000488351 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
VEGFD-202ENST00000488351 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
VEGFD-202ENST00000488351 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
VEGFD-202ENST00000488351 P3H3Q8IVL6 736 aa13□□□□□ -0.33
VEGFD-202ENST00000488351 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
VEGFD-202ENST00000488351 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
VEGFD-202ENST00000488351 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
VEGFD-202ENST00000488351 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
VEGFD-202ENST00000488351 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
VEGFD-202ENST00000488351 DISP1Q96F81 1524 aa12.97□□□□□ -0.33
VEGFD-202ENST00000488351 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
VEGFD-202ENST00000488351 CHD1O14646 1710 aa12.95□□□□□ -0.34
VEGFD-202ENST00000488351 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
VEGFD-202ENST00000488351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
VEGFD-202ENST00000488351 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
VEGFD-202ENST00000488351 MTUS2Q5JR59 1369 aa12.92□□□□□ -0.34
VEGFD-202ENST00000488351 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
VEGFD-202ENST00000488351 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
VEGFD-202ENST00000488351 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
VEGFD-202ENST00000488351 SHROOM2Q13796 1616 aa12.9□□□□□ -0.34
VEGFD-202ENST00000488351 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
VEGFD-202ENST00000488351 TTBK1Q5TCY1 1321 aaPredicted RBP12.88□□□□□ -0.35
VEGFD-202ENST00000488351 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
VEGFD-202ENST00000488351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.35
VEGFD-202ENST00000488351 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
VEGFD-202ENST00000488351 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
VEGFD-202ENST00000488351 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
VEGFD-202ENST00000488351 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
VEGFD-202ENST00000488351 PTPRGP23470 1445 aa12.85□□□□□ -0.35
VEGFD-202ENST00000488351 HRCP23327 699 aa12.83□□□□□ -0.36
VEGFD-202ENST00000488351 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
VEGFD-202ENST00000488351 ABCA8O94911 1581 aa12.81□□□□□ -0.36
VEGFD-202ENST00000488351 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
VEGFD-202ENST00000488351 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
VEGFD-202ENST00000488351 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
VEGFD-202ENST00000488351 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
VEGFD-202ENST00000488351 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
VEGFD-202ENST00000488351 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
VEGFD-202ENST00000488351 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
VEGFD-202ENST00000488351 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
VEGFD-202ENST00000488351 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
VEGFD-202ENST00000488351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
VEGFD-202ENST00000488351 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
VEGFD-202ENST00000488351 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
VEGFD-202ENST00000488351 TROQ12816 1431 aaPredicted RBP12.77□□□□□ -0.37
VEGFD-202ENST00000488351 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
VEGFD-202ENST00000488351 PLEKHD1A6NEE1 506 aa12.76□□□□□ -0.37
VEGFD-202ENST00000488351 ACIN1Q9UKV3 1341 aaKnown RBP12.76□□□□□ -0.37
VEGFD-202ENST00000488351 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
VEGFD-202ENST00000488351 UHRF1BP1LA0JNW5 1464 aa12.75□□□□□ -0.37
VEGFD-202ENST00000488351 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms