RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 NEFLP07196 543 aa20.19■□□□□ 0.82
COL16A1-214ENST00000488128 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
COL16A1-214ENST00000488128 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
COL16A1-214ENST00000488128 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
COL16A1-214ENST00000488128 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
COL16A1-214ENST00000488128 IRX6P78412 446 aaPredicted RBP20.12■□□□□ 0.81
COL16A1-214ENST00000488128 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
COL16A1-214ENST00000488128 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
COL16A1-214ENST00000488128 RAB3GAP2Q9H2M9 1393 aa20.11■□□□□ 0.81
COL16A1-214ENST00000488128 FANCD2Q9BXW9 1451 aa20.09■□□□□ 0.81
COL16A1-214ENST00000488128 MSH5O43196 834 aa20.08■□□□□ 0.81
COL16A1-214ENST00000488128 ATP1B4Q9UN42 357 aaPredicted RBP20.06■□□□□ 0.8
COL16A1-214ENST00000488128 NESP48681 1621 aa20.06■□□□□ 0.8
COL16A1-214ENST00000488128 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
COL16A1-214ENST00000488128 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
COL16A1-214ENST00000488128 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
COL16A1-214ENST00000488128 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
COL16A1-214ENST00000488128 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
COL16A1-214ENST00000488128 PPP1R15AO75807 674 aaPredicted RBP20.01■□□□□ 0.79
COL16A1-214ENST00000488128 ANP32CO43423 234 aa20■□□□□ 0.79
COL16A1-214ENST00000488128 MAPKBP1O60336 1514 aa19.98■□□□□ 0.79
COL16A1-214ENST00000488128 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
COL16A1-214ENST00000488128 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
COL16A1-214ENST00000488128 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
COL16A1-214ENST00000488128 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
COL16A1-214ENST00000488128 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
COL16A1-214ENST00000488128 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
COL16A1-214ENST00000488128 DNMBPQ6XZF7 1577 aa19.89■□□□□ 0.77
COL16A1-214ENST00000488128 SETD5Q9C0A6 1442 aa19.88■□□□□ 0.77
COL16A1-214ENST00000488128 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
COL16A1-214ENST00000488128 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
COL16A1-214ENST00000488128 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
COL16A1-214ENST00000488128 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
COL16A1-214ENST00000488128 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
COL16A1-214ENST00000488128 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
COL16A1-214ENST00000488128 CCER2I3L3R5 266 aa19.83■□□□□ 0.77
COL16A1-214ENST00000488128 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
COL16A1-214ENST00000488128 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
COL16A1-214ENST00000488128 PCF11O94913 1555 aaKnown RBP19.78■□□□□ 0.76
COL16A1-214ENST00000488128 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
COL16A1-214ENST00000488128 TONSLQ96HA7 1378 aa19.72■□□□□ 0.75
COL16A1-214ENST00000488128 B4GALNT3Q6L9W6 998 aa19.72■□□□□ 0.75
COL16A1-214ENST00000488128 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
COL16A1-214ENST00000488128 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
COL16A1-214ENST00000488128 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
COL16A1-214ENST00000488128 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
COL16A1-214ENST00000488128 NBR1Q14596 966 aa19.69■□□□□ 0.74
COL16A1-214ENST00000488128 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
COL16A1-214ENST00000488128 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
COL16A1-214ENST00000488128 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
COL16A1-214ENST00000488128 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
COL16A1-214ENST00000488128 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
COL16A1-214ENST00000488128 FYCO1Q9BQS8 1478 aa19.65■□□□□ 0.74
COL16A1-214ENST00000488128 CUL7Q14999 1698 aa19.65■□□□□ 0.74
COL16A1-214ENST00000488128 DEKP35659 375 aaKnown RBP19.64■□□□□ 0.73
COL16A1-214ENST00000488128 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
COL16A1-214ENST00000488128 CFAP43Q8NDM7 1665 aa19.63■□□□□ 0.73
COL16A1-214ENST00000488128 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
COL16A1-214ENST00000488128 MTUS2Q5JR59 1369 aa19.62■□□□□ 0.73
COL16A1-214ENST00000488128 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
COL16A1-214ENST00000488128 CTTNBP2Q8WZ74 1663 aa19.59■□□□□ 0.73
COL16A1-214ENST00000488128 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
COL16A1-214ENST00000488128 AQRO60306 1485 aaKnown RBP eCLIP19.57■□□□□ 0.72
COL16A1-214ENST00000488128 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
COL16A1-214ENST00000488128 ABCA5Q8WWZ7 1642 aa19.57■□□□□ 0.72
COL16A1-214ENST00000488128 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
COL16A1-214ENST00000488128 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
COL16A1-214ENST00000488128 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
COL16A1-214ENST00000488128 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
COL16A1-214ENST00000488128 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
COL16A1-214ENST00000488128 FGD6Q6ZV73 1430 aa19.54■□□□□ 0.72
COL16A1-214ENST00000488128 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
COL16A1-214ENST00000488128 MRS2Q9HD23 443 aa19.5■□□□□ 0.71
COL16A1-214ENST00000488128 PTPRKQ15262 1439 aa19.49■□□□□ 0.71
COL16A1-214ENST00000488128 RRP7BPQ9NSQ0 103 aa19.48■□□□□ 0.71
COL16A1-214ENST00000488128 SAMD9Q5K651 1589 aa19.47■□□□□ 0.71
COL16A1-214ENST00000488128 C11orf95C9JLR9 678 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-214ENST00000488128 NCOA2Q15596 1464 aa19.46■□□□□ 0.71
COL16A1-214ENST00000488128 NOP58Q9Y2X3 529 aaKnown RBP19.46■□□□□ 0.71
COL16A1-214ENST00000488128 GRIN2BQ13224 1484 aa19.46■□□□□ 0.71
COL16A1-214ENST00000488128 FOXD1Q16676 465 aa19.46■□□□□ 0.71
COL16A1-214ENST00000488128 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
COL16A1-214ENST00000488128 TARBP1Q13395 1621 aaKnown RBP19.45■□□□□ 0.7
COL16A1-214ENST00000488128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.45■□□□□ 0.7
COL16A1-214ENST00000488128 LRRIQ1Q96JM4 1722 aa19.42■□□□□ 0.7
COL16A1-214ENST00000488128 MYOM3Q5VTT5 1437 aa19.42■□□□□ 0.7
COL16A1-214ENST00000488128 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
COL16A1-214ENST00000488128 EIF4G2P78344 907 aaKnown RBP eCLIP19.4■□□□□ 0.7
COL16A1-214ENST00000488128 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
COL16A1-214ENST00000488128 MAGI3Q5TCQ9 1506 aa19.38■□□□□ 0.69
COL16A1-214ENST00000488128 HFM1A2PYH4 1435 aa19.36■□□□□ 0.69
COL16A1-214ENST00000488128 ZNF608Q9ULD9 1512 aaPredicted RBP19.36■□□□□ 0.69
COL16A1-214ENST00000488128 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
COL16A1-214ENST00000488128 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
COL16A1-214ENST00000488128 ANO8Q9HCE9 1232 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-214ENST00000488128 NAIPQ13075 1403 aa19.35■□□□□ 0.69
COL16A1-214ENST00000488128 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
COL16A1-214ENST00000488128 PRKCSHP14314 528 aaPredicted RBP19.34■□□□□ 0.69
COL16A1-214ENST00000488128 ERICH6BQ5W0A0 696 aa19.34■□□□□ 0.69
COL16A1-214ENST00000488128 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms