RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 CUX1P39880 1505 aa14.2□□□□□ -0.14
TMF1-203ENST00000488010 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
TMF1-203ENST00000488010 SETD5Q9C0A6 1442 aa14.19□□□□□ -0.14
TMF1-203ENST00000488010 WDR97A6NE52 1622 aa14.18□□□□□ -0.14
TMF1-203ENST00000488010 ANP32CO43423 234 aa14.16□□□□□ -0.14
TMF1-203ENST00000488010 PHLDB1Q86UU1 1377 aa14.14□□□□□ -0.15
TMF1-203ENST00000488010 PPP1R15AO75807 674 aaPredicted RBP14.13□□□□□ -0.15
TMF1-203ENST00000488010 RBM19Q9Y4C8 960 aaKnown RBP14.13□□□□□ -0.15
TMF1-203ENST00000488010 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
TMF1-203ENST00000488010 LRRC9Q6ZRR7 1453 aa14.08□□□□□ -0.15
TMF1-203ENST00000488010 IGF1RP08069 1367 aa14.08□□□□□ -0.16
TMF1-203ENST00000488010 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
TMF1-203ENST00000488010 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
TMF1-203ENST00000488010 BCL11AQ9H165 835 aa14.06□□□□□ -0.16
TMF1-203ENST00000488010 TONSLQ96HA7 1378 aa14.05□□□□□ -0.16
TMF1-203ENST00000488010 CCER2I3L3R5 266 aa14.05□□□□□ -0.16
TMF1-203ENST00000488010 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
TMF1-203ENST00000488010 CFTRP13569 1480 aa14.02□□□□□ -0.17
TMF1-203ENST00000488010 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
TMF1-203ENST00000488010 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
TMF1-203ENST00000488010 FHOD3Q2V2M9 1422 aa14□□□□□ -0.17
TMF1-203ENST00000488010 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
TMF1-203ENST00000488010 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
TMF1-203ENST00000488010 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
TMF1-203ENST00000488010 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
TMF1-203ENST00000488010 ERICH6Q7L0X2 663 aa13.96□□□□□ -0.17
TMF1-203ENST00000488010 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
TMF1-203ENST00000488010 MSH5O43196 834 aa13.94□□□□□ -0.18
TMF1-203ENST00000488010 CDK11AQ9UQ88 783 aaPredicted RBP13.94□□□□□ -0.18
TMF1-203ENST00000488010 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
TMF1-203ENST00000488010 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
TMF1-203ENST00000488010 CHIC2Q9UKJ5 165 aa13.89□□□□□ -0.19
TMF1-203ENST00000488010 CFAP43Q8NDM7 1665 aa13.89□□□□□ -0.19
TMF1-203ENST00000488010 FGD6Q6ZV73 1430 aa13.88□□□□□ -0.19
TMF1-203ENST00000488010 RRP7BPQ9NSQ0 103 aa13.88□□□□□ -0.19
TMF1-203ENST00000488010 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
TMF1-203ENST00000488010 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
TMF1-203ENST00000488010 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
TMF1-203ENST00000488010 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
TMF1-203ENST00000488010 PTPRKQ15262 1439 aa13.85□□□□□ -0.19
TMF1-203ENST00000488010 FYCO1Q9BQS8 1478 aa13.85□□□□□ -0.19
TMF1-203ENST00000488010 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
TMF1-203ENST00000488010 CASKIN1Q8WXD9 1431 aa13.85□□□□□ -0.19
TMF1-203ENST00000488010 CCDC184Q52MB2 194 aa13.84□□□□□ -0.19
TMF1-203ENST00000488010 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
TMF1-203ENST00000488010 WASHC2AQ641Q2 1341 aa13.84□□□□□ -0.19
TMF1-203ENST00000488010 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
TMF1-203ENST00000488010 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.28e-7■■■■■ 28.2
TMF1-203ENST00000488010 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
TMF1-203ENST00000488010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.81□□□□□ -0.2
TMF1-203ENST00000488010 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMF1-203ENST00000488010 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
TMF1-203ENST00000488010 ARID3CA6NKF2 412 aa13.8□□□□□ -0.2
TMF1-203ENST00000488010 FOXD1Q16676 465 aa13.8□□□□□ -0.2
TMF1-203ENST00000488010 MRS2Q9HD23 443 aa13.8□□□□□ -0.2
TMF1-203ENST00000488010 NAIPQ13075 1403 aa13.79□□□□□ -0.2
TMF1-203ENST00000488010 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
TMF1-203ENST00000488010 PTPN23Q9H3S7 1636 aa13.79□□□□□ -0.2
TMF1-203ENST00000488010 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
TMF1-203ENST00000488010 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
TMF1-203ENST00000488010 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
TMF1-203ENST00000488010 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
TMF1-203ENST00000488010 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
TMF1-203ENST00000488010 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
TMF1-203ENST00000488010 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
TMF1-203ENST00000488010 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
TMF1-203ENST00000488010 MYOM3Q5VTT5 1437 aa13.74□□□□□ -0.21
TMF1-203ENST00000488010 L3MBTL2Q969R5 705 aa13.74□□□□□ -0.21
TMF1-203ENST00000488010 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
TMF1-203ENST00000488010 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
TMF1-203ENST00000488010 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
TMF1-203ENST00000488010 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.21
TMF1-203ENST00000488010 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.22
TMF1-203ENST00000488010 KDM5BQ9UGL1 1544 aa13.7□□□□□ -0.22
TMF1-203ENST00000488010 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
TMF1-203ENST00000488010 NBR1Q14596 966 aa13.7□□□□□ -0.22
TMF1-203ENST00000488010 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
TMF1-203ENST00000488010 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
TMF1-203ENST00000488010 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
TMF1-203ENST00000488010 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
TMF1-203ENST00000488010 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
TMF1-203ENST00000488010 CTTNBP2Q8WZ74 1663 aa13.67□□□□□ -0.22
TMF1-203ENST00000488010 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
TMF1-203ENST00000488010 ZBED9Q6R2W3 1325 aa13.66□□□□□ -0.22
TMF1-203ENST00000488010 DEKP35659 375 aaKnown RBP13.65□□□□□ -0.22
TMF1-203ENST00000488010 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.22
TMF1-203ENST00000488010 NESP48681 1621 aa13.65□□□□□ -0.22
TMF1-203ENST00000488010 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
TMF1-203ENST00000488010 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
TMF1-203ENST00000488010 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
TMF1-203ENST00000488010 CUL7Q14999 1698 aa13.63□□□□□ -0.23
TMF1-203ENST00000488010 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
TMF1-203ENST00000488010 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
TMF1-203ENST00000488010 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
TMF1-203ENST00000488010 DENND4BO75064 1496 aaPredicted RBP13.62□□□□□ -0.23
TMF1-203ENST00000488010 KDM6BO15054 1643 aa13.62□□□□□ -0.23
TMF1-203ENST00000488010 EHBP1L1Q8N3D4 1523 aa13.62□□□□□ -0.23
TMF1-203ENST00000488010 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
TMF1-203ENST00000488010 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
TMF1-203ENST00000488010 NCOA1Q15788 1441 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms