RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 CHD1O14646 1710 aa16.32■□□□□ 0.2
PTBP3-208ENST00000487997 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
PTBP3-208ENST00000487997 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
PTBP3-208ENST00000487997 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
PTBP3-208ENST00000487997 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
PTBP3-208ENST00000487997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
PTBP3-208ENST00000487997 DSG3P32926 999 aa16.28■□□□□ 0.2
PTBP3-208ENST00000487997 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
PTBP3-208ENST00000487997 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
PTBP3-208ENST00000487997 FBLN2P98095 1184 aa16.26■□□□□ 0.19
PTBP3-208ENST00000487997 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
PTBP3-208ENST00000487997 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
PTBP3-208ENST00000487997 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
PTBP3-208ENST00000487997 APLP2Q06481 763 aa16.21■□□□□ 0.19
PTBP3-208ENST00000487997 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
PTBP3-208ENST00000487997 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
PTBP3-208ENST00000487997 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
PTBP3-208ENST00000487997 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
PTBP3-208ENST00000487997 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
PTBP3-208ENST00000487997 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
PTBP3-208ENST00000487997 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
PTBP3-208ENST00000487997 ADAMTS12P58397 1594 aa16.14■□□□□ 0.17
PTBP3-208ENST00000487997 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
PTBP3-208ENST00000487997 ZBTB22O15209 634 aa16.12■□□□□ 0.17
PTBP3-208ENST00000487997 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
PTBP3-208ENST00000487997 CUL7Q14999 1698 aa16.09■□□□□ 0.17
PTBP3-208ENST00000487997 GRIN2AQ12879 1464 aa16.09■□□□□ 0.17
PTBP3-208ENST00000487997 ABCB7O75027 752 aa16.07■□□□□ 0.16
PTBP3-208ENST00000487997 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
PTBP3-208ENST00000487997 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
PTBP3-208ENST00000487997 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
PTBP3-208ENST00000487997 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
PTBP3-208ENST00000487997 IGF1RP08069 1367 aa16.03■□□□□ 0.16
PTBP3-208ENST00000487997 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
PTBP3-208ENST00000487997 CEP170Q5SW79 1584 aa16■□□□□ 0.15
PTBP3-208ENST00000487997 NUP160Q12769 1436 aa15.98■□□□□ 0.15
PTBP3-208ENST00000487997 CARMIL1Q5VZK9 1371 aa15.98■□□□□ 0.15
PTBP3-208ENST00000487997 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
PTBP3-208ENST00000487997 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
PTBP3-208ENST00000487997 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
PTBP3-208ENST00000487997 SHROOM2Q13796 1616 aa15.9■□□□□ 0.14
PTBP3-208ENST00000487997 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
PTBP3-208ENST00000487997 EEA1Q15075 1411 aa15.87■□□□□ 0.13
PTBP3-208ENST00000487997 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
PTBP3-208ENST00000487997 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
PTBP3-208ENST00000487997 ARAP1Q96P48 1450 aa15.85■□□□□ 0.13
PTBP3-208ENST00000487997 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
PTBP3-208ENST00000487997 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
PTBP3-208ENST00000487997 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
PTBP3-208ENST00000487997 IQGAP2Q13576 1575 aa15.82■□□□□ 0.12
PTBP3-208ENST00000487997 POLA2Q14181 598 aa15.81■□□□□ 0.12
PTBP3-208ENST00000487997 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
PTBP3-208ENST00000487997 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
PTBP3-208ENST00000487997 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
PTBP3-208ENST00000487997 CARMIL2Q6F5E8 1435 aa15.74■□□□□ 0.11
PTBP3-208ENST00000487997 KIF21BO75037 1637 aa15.72■□□□□ 0.11
PTBP3-208ENST00000487997 UGGT2Q9NYU1 1516 aa15.69■□□□□ 0.1
PTBP3-208ENST00000487997 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
PTBP3-208ENST00000487997 GOLGA3Q08378 1498 aa15.65■□□□□ 0.1
PTBP3-208ENST00000487997 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
PTBP3-208ENST00000487997 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
PTBP3-208ENST00000487997 ATXN8OSP0DMR3 200 aa15.65■□□□□ 0.1
PTBP3-208ENST00000487997 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
PTBP3-208ENST00000487997 PTPRGP23470 1445 aa15.64■□□□□ 0.09
PTBP3-208ENST00000487997 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
PTBP3-208ENST00000487997 NPM1P06748 294 aaKnown RBP eCLIP15.61■□□□□ 0.09
PTBP3-208ENST00000487997 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
PTBP3-208ENST00000487997 ADCY10Q96PN6 1610 aa15.59■□□□□ 0.09
PTBP3-208ENST00000487997 RANGAP1P46060 587 aaPredicted RBP15.57■□□□□ 0.08
PTBP3-208ENST00000487997 SAMD9Q5K651 1589 aa15.54■□□□□ 0.08
PTBP3-208ENST00000487997 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
PTBP3-208ENST00000487997 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
PTBP3-208ENST00000487997 ABCC2Q92887 1545 aa15.51■□□□□ 0.07
PTBP3-208ENST00000487997 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
PTBP3-208ENST00000487997 EFCAB5A4FU69 1503 aa15.5■□□□□ 0.07
PTBP3-208ENST00000487997 KIF13AQ9H1H9 1805 aa15.48■□□□□ 0.07
PTBP3-208ENST00000487997 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
PTBP3-208ENST00000487997 ZCCHC11Q5TAX3 1644 aaKnown RBP15.46■□□□□ 0.07
PTBP3-208ENST00000487997 PLB1Q6P1J6 1458 aa15.46■□□□□ 0.07
PTBP3-208ENST00000487997 ABCA8O94911 1581 aa15.45■□□□□ 0.06
PTBP3-208ENST00000487997 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
PTBP3-208ENST00000487997 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
PTBP3-208ENST00000487997 FHOD3Q2V2M9 1422 aa15.43■□□□□ 0.06
PTBP3-208ENST00000487997 RAPGEF6Q8TEU7 1601 aa15.43■□□□□ 0.06
PTBP3-208ENST00000487997 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
PTBP3-208ENST00000487997 TSPOAP1O95153 1857 aa15.4■□□□□ 0.06
PTBP3-208ENST00000487997 ASXL2Q76L83 1435 aa15.39■□□□□ 0.05
PTBP3-208ENST00000487997 DIP2BQ9P265 1576 aa15.39■□□□□ 0.05
PTBP3-208ENST00000487997 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
PTBP3-208ENST00000487997 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
PTBP3-208ENST00000487997 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
PTBP3-208ENST00000487997 FMN1Q68DA7 1419 aa15.35■□□□□ 0.05
PTBP3-208ENST00000487997 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
PTBP3-208ENST00000487997 WDR7Q9Y4E6 1490 aa15.33■□□□□ 0.04
PTBP3-208ENST00000487997 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
PTBP3-208ENST00000487997 CLIP1P30622 1438 aa15.32■□□□□ 0.04
PTBP3-208ENST00000487997 ATP10BO94823 1461 aa15.32■□□□□ 0.04
PTBP3-208ENST00000487997 GLI2P10070 1586 aa15.31■□□□□ 0.04
PTBP3-208ENST00000487997 HECW1Q76N89 1606 aa15.31■□□□□ 0.04
PTBP3-208ENST00000487997 NUP153P49790 1475 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms