RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.463e-6■■■□□ 18.4
TMEM39B-208ENST00000487305 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
TMEM39B-208ENST00000487305 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
TMEM39B-208ENST00000487305 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
TMEM39B-208ENST00000487305 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
TMEM39B-208ENST00000487305 ABCA10Q8WWZ4 1543 aa17.92■□□□□ 0.46
TMEM39B-208ENST00000487305 CUL7Q14999 1698 aa17.92■□□□□ 0.46
TMEM39B-208ENST00000487305 FYCO1Q9BQS8 1478 aa17.91■□□□□ 0.46
TMEM39B-208ENST00000487305 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
TMEM39B-208ENST00000487305 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
TMEM39B-208ENST00000487305 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
TMEM39B-208ENST00000487305 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
TMEM39B-208ENST00000487305 FMN1Q68DA7 1419 aa17.83■□□□□ 0.44
TMEM39B-208ENST00000487305 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.44
TMEM39B-208ENST00000487305 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
TMEM39B-208ENST00000487305 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
TMEM39B-208ENST00000487305 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
TMEM39B-208ENST00000487305 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
TMEM39B-208ENST00000487305 LAMC3Q9Y6N6 1575 aa17.76■□□□□ 0.43
TMEM39B-208ENST00000487305 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-208ENST00000487305 ITGAEP38570 1179 aa17.74■□□□□ 0.43
TMEM39B-208ENST00000487305 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
TMEM39B-208ENST00000487305 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
TMEM39B-208ENST00000487305 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
TMEM39B-208ENST00000487305 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
TMEM39B-208ENST00000487305 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
TMEM39B-208ENST00000487305 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
TMEM39B-208ENST00000487305 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
TMEM39B-208ENST00000487305 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
TMEM39B-208ENST00000487305 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
TMEM39B-208ENST00000487305 HFM1A2PYH4 1435 aa17.65■□□□□ 0.42
TMEM39B-208ENST00000487305 UACAQ9BZF9 1416 aa17.63■□□□□ 0.41
TMEM39B-208ENST00000487305 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
TMEM39B-208ENST00000487305 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
TMEM39B-208ENST00000487305 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
TMEM39B-208ENST00000487305 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
TMEM39B-208ENST00000487305 PDS5BQ9NTI5 1447 aa17.61■□□□□ 0.41
TMEM39B-208ENST00000487305 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
TMEM39B-208ENST00000487305 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
TMEM39B-208ENST00000487305 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
TMEM39B-208ENST00000487305 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
TMEM39B-208ENST00000487305 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
TMEM39B-208ENST00000487305 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
TMEM39B-208ENST00000487305 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
TMEM39B-208ENST00000487305 P3H3Q8IVL6 736 aa17.58■□□□□ 0.4
TMEM39B-208ENST00000487305 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
TMEM39B-208ENST00000487305 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
TMEM39B-208ENST00000487305 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
TMEM39B-208ENST00000487305 NCOA2Q15596 1464 aa17.55■□□□□ 0.4
TMEM39B-208ENST00000487305 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
TMEM39B-208ENST00000487305 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
TMEM39B-208ENST00000487305 NESP48681 1621 aa17.54■□□□□ 0.4
TMEM39B-208ENST00000487305 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
TMEM39B-208ENST00000487305 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
TMEM39B-208ENST00000487305 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
TMEM39B-208ENST00000487305 NAIPQ13075 1403 aa17.5■□□□□ 0.39
TMEM39B-208ENST00000487305 ANP32CO43423 234 aa17.5■□□□□ 0.39
TMEM39B-208ENST00000487305 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
TMEM39B-208ENST00000487305 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
TMEM39B-208ENST00000487305 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
TMEM39B-208ENST00000487305 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
TMEM39B-208ENST00000487305 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
TMEM39B-208ENST00000487305 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
TMEM39B-208ENST00000487305 GCC2Q8IWJ2 1684 aa17.45■□□□□ 0.38
TMEM39B-208ENST00000487305 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
TMEM39B-208ENST00000487305 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
TMEM39B-208ENST00000487305 NEFLP07196 543 aa17.4■□□□□ 0.38
TMEM39B-208ENST00000487305 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
TMEM39B-208ENST00000487305 EPRSP07814 1512 aaKnown RBP17.36■□□□□ 0.37
TMEM39B-208ENST00000487305 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
TMEM39B-208ENST00000487305 ROCK1Q13464 1354 aa17.35■□□□□ 0.37
TMEM39B-208ENST00000487305 KDM5BQ9UGL1 1544 aa17.35■□□□□ 0.37
TMEM39B-208ENST00000487305 KCNH8Q96L42 1107 aa17.35■□□□□ 0.37
TMEM39B-208ENST00000487305 MAGI3Q5TCQ9 1506 aa17.33■□□□□ 0.36
TMEM39B-208ENST00000487305 WDR62O43379 1518 aa17.32■□□□□ 0.36
TMEM39B-208ENST00000487305 TSHZ2Q9NRE2 1034 aa17.32■□□□□ 0.36
TMEM39B-208ENST00000487305 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
TMEM39B-208ENST00000487305 FKBP8Q14318 412 aa17.27■□□□□ 0.36
TMEM39B-208ENST00000487305 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.35
TMEM39B-208ENST00000487305 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
TMEM39B-208ENST00000487305 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
TMEM39B-208ENST00000487305 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
TMEM39B-208ENST00000487305 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
TMEM39B-208ENST00000487305 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
TMEM39B-208ENST00000487305 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
TMEM39B-208ENST00000487305 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
TMEM39B-208ENST00000487305 TRIM52Q96A61 297 aa17.21■□□□□ 0.35
TMEM39B-208ENST00000487305 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
TMEM39B-208ENST00000487305 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
TMEM39B-208ENST00000487305 DAPK1P53355 1430 aa17.2■□□□□ 0.34
TMEM39B-208ENST00000487305 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
TMEM39B-208ENST00000487305 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
TMEM39B-208ENST00000487305 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
TMEM39B-208ENST00000487305 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
TMEM39B-208ENST00000487305 CDK13Q14004 1512 aaKnown RBP17.18■□□□□ 0.34
TMEM39B-208ENST00000487305 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
TMEM39B-208ENST00000487305 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
TMEM39B-208ENST00000487305 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
TMEM39B-208ENST00000487305 RAPGEF6Q8TEU7 1601 aa17.16■□□□□ 0.34
TMEM39B-208ENST00000487305 POLR1AO95602 1720 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms