RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 IGF1RP08069 1367 aa17.88■□□□□ 0.45
SGSM3-213ENST00000485962 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
SGSM3-213ENST00000485962 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
SGSM3-213ENST00000485962 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.44
SGSM3-213ENST00000485962 TIAM1Q13009 1591 aa17.8■□□□□ 0.44
SGSM3-213ENST00000485962 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
SGSM3-213ENST00000485962 ATP1B4Q9UN42 357 aaPredicted RBP17.79■□□□□ 0.44
SGSM3-213ENST00000485962 RAB3GAP2Q9H2M9 1393 aa17.78■□□□□ 0.44
SGSM3-213ENST00000485962 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
SGSM3-213ENST00000485962 PODXL2Q9NZ53 605 aa17.76■□□□□ 0.43
SGSM3-213ENST00000485962 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
SGSM3-213ENST00000485962 LRRC9Q6ZRR7 1453 aa17.74■□□□□ 0.43
SGSM3-213ENST00000485962 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
SGSM3-213ENST00000485962 FHAD1B1AJZ9 1412 aa17.72■□□□□ 0.43
SGSM3-213ENST00000485962 PHLDB1Q86UU1 1377 aa17.71■□□□□ 0.43
SGSM3-213ENST00000485962 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
SGSM3-213ENST00000485962 SETD5Q9C0A6 1442 aa17.7■□□□□ 0.42
SGSM3-213ENST00000485962 UBE2Q2Q8WVN8 375 aa17.69■□□□□ 0.42
SGSM3-213ENST00000485962 MAPKBP1O60336 1514 aa17.68■□□□□ 0.42
SGSM3-213ENST00000485962 PCF11O94913 1555 aaKnown RBP17.68■□□□□ 0.42
SGSM3-213ENST00000485962 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
SGSM3-213ENST00000485962 FHOD3Q2V2M9 1422 aa17.65■□□□□ 0.42
SGSM3-213ENST00000485962 CFAP43Q8NDM7 1665 aa17.65■□□□□ 0.42
SGSM3-213ENST00000485962 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
SGSM3-213ENST00000485962 NESP48681 1621 aa17.62■□□□□ 0.41
SGSM3-213ENST00000485962 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
SGSM3-213ENST00000485962 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
SGSM3-213ENST00000485962 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
SGSM3-213ENST00000485962 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.4
SGSM3-213ENST00000485962 TOPBP1Q92547 1522 aa17.58■□□□□ 0.4
SGSM3-213ENST00000485962 FYCO1Q9BQS8 1478 aa17.57■□□□□ 0.4
SGSM3-213ENST00000485962 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
SGSM3-213ENST00000485962 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
SGSM3-213ENST00000485962 EFCAB5A4FU69 1503 aa17.55■□□□□ 0.4
SGSM3-213ENST00000485962 CTTNBP2Q8WZ74 1663 aa17.54■□□□□ 0.4
SGSM3-213ENST00000485962 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
SGSM3-213ENST00000485962 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
SGSM3-213ENST00000485962 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
SGSM3-213ENST00000485962 CUL7Q14999 1698 aa17.53■□□□□ 0.4
SGSM3-213ENST00000485962 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
SGSM3-213ENST00000485962 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
SGSM3-213ENST00000485962 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.396e-7■■■■□ 20.4
SGSM3-213ENST00000485962 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
SGSM3-213ENST00000485962 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
SGSM3-213ENST00000485962 PKNOX2Q96KN3 472 aa17.47■□□□□ 0.39
SGSM3-213ENST00000485962 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
SGSM3-213ENST00000485962 KLHL34Q8N239 644 aa17.46■□□□□ 0.38
SGSM3-213ENST00000485962 FGD6Q6ZV73 1430 aa17.46■□□□□ 0.38
SGSM3-213ENST00000485962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
SGSM3-213ENST00000485962 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
SGSM3-213ENST00000485962 PPP1R15AO75807 674 aaPredicted RBP17.43■□□□□ 0.38
SGSM3-213ENST00000485962 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
SGSM3-213ENST00000485962 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
SGSM3-213ENST00000485962 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
SGSM3-213ENST00000485962 CCDC18Q5T9S5 1454 aa17.41■□□□□ 0.38
SGSM3-213ENST00000485962 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
SGSM3-213ENST00000485962 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
SGSM3-213ENST00000485962 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
SGSM3-213ENST00000485962 ANP32CO43423 234 aa17.36■□□□□ 0.37
SGSM3-213ENST00000485962 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
SGSM3-213ENST00000485962 PTPRKQ15262 1439 aa17.36■□□□□ 0.37
SGSM3-213ENST00000485962 NCOA2Q15596 1464 aa17.35■□□□□ 0.37
SGSM3-213ENST00000485962 HFM1A2PYH4 1435 aa17.35■□□□□ 0.37
SGSM3-213ENST00000485962 SAMD9Q5K651 1589 aa17.35■□□□□ 0.37
SGSM3-213ENST00000485962 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
SGSM3-213ENST00000485962 BCANQ96GW7 911 aa17.34■□□□□ 0.37
SGSM3-213ENST00000485962 UACAQ9BZF9 1416 aa17.34■□□□□ 0.37
SGSM3-213ENST00000485962 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
SGSM3-213ENST00000485962 MYOM3Q5VTT5 1437 aa17.33■□□□□ 0.37
SGSM3-213ENST00000485962 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
SGSM3-213ENST00000485962 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
SGSM3-213ENST00000485962 NAIPQ13075 1403 aa17.3■□□□□ 0.36
SGSM3-213ENST00000485962 FKBP8Q14318 412 aa17.3■□□□□ 0.36
SGSM3-213ENST00000485962 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
SGSM3-213ENST00000485962 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
SGSM3-213ENST00000485962 EHBP1L1Q8N3D4 1523 aa17.29■□□□□ 0.36
SGSM3-213ENST00000485962 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SGSM3-213ENST00000485962 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
SGSM3-213ENST00000485962 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
SGSM3-213ENST00000485962 CHIC2Q9UKJ5 165 aa17.28■□□□□ 0.36
SGSM3-213ENST00000485962 THOC2Q8NI27 1593 aaKnown RBP17.27■□□□□ 0.36
SGSM3-213ENST00000485962 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.35
SGSM3-213ENST00000485962 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
SGSM3-213ENST00000485962 NEFLP07196 543 aa17.25■□□□□ 0.35
SGSM3-213ENST00000485962 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
SGSM3-213ENST00000485962 UGGT2Q9NYU1 1516 aa17.23■□□□□ 0.35
SGSM3-213ENST00000485962 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
SGSM3-213ENST00000485962 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
SGSM3-213ENST00000485962 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
SGSM3-213ENST00000485962 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
SGSM3-213ENST00000485962 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
SGSM3-213ENST00000485962 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
SGSM3-213ENST00000485962 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
SGSM3-213ENST00000485962 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
SGSM3-213ENST00000485962 EPRSP07814 1512 aaKnown RBP17.15■□□□□ 0.34
SGSM3-213ENST00000485962 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
SGSM3-213ENST00000485962 GCC2Q8IWJ2 1684 aa17.14■□□□□ 0.33
SGSM3-213ENST00000485962 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
SGSM3-213ENST00000485962 KDM5BQ9UGL1 1544 aa17.13■□□□□ 0.33
SGSM3-213ENST00000485962 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms