RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
LINC01140-206ENST00000484933 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
LINC01140-206ENST00000484933 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
LINC01140-206ENST00000484933 FBLN2P98095 1184 aa14.28□□□□□ -0.12
LINC01140-206ENST00000484933 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.12
LINC01140-206ENST00000484933 IL27Q8NEV9 243 aa14.24□□□□□ -0.13
LINC01140-206ENST00000484933 FANCD2Q9BXW9 1451 aa14.23□□□□□ -0.13
LINC01140-206ENST00000484933 EIF5BO60841 1220 aaKnown RBP14.22□□□□□ -0.13
LINC01140-206ENST00000484933 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
LINC01140-206ENST00000484933 FANCIQ9NVI1 1328 aa14.21□□□□□ -0.13
LINC01140-206ENST00000484933 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
LINC01140-206ENST00000484933 CFTRP13569 1480 aa14.18□□□□□ -0.14
LINC01140-206ENST00000484933 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
LINC01140-206ENST00000484933 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
LINC01140-206ENST00000484933 TDRD9Q8NDG6 1382 aaKnown RBP14.16□□□□□ -0.14
LINC01140-206ENST00000484933 SYNJ1O43426 1573 aa14.16□□□□□ -0.14
LINC01140-206ENST00000484933 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
LINC01140-206ENST00000484933 KIF21BO75037 1637 aa14.16□□□□□ -0.14
LINC01140-206ENST00000484933 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
LINC01140-206ENST00000484933 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
LINC01140-206ENST00000484933 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
LINC01140-206ENST00000484933 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
LINC01140-206ENST00000484933 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
LINC01140-206ENST00000484933 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
LINC01140-206ENST00000484933 B4GALNT3Q6L9W6 998 aa14.07□□□□□ -0.16
LINC01140-206ENST00000484933 ANP32CO43423 234 aa14.06□□□□□ -0.16
LINC01140-206ENST00000484933 HNRNPUQ00839 825 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC01140-206ENST00000484933 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
LINC01140-206ENST00000484933 UBE2Q2Q8WVN8 375 aa14.05□□□□□ -0.16
LINC01140-206ENST00000484933 ERICH6BQ5W0A0 696 aa14.04□□□□□ -0.16
LINC01140-206ENST00000484933 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
LINC01140-206ENST00000484933 CUX1P39880 1505 aa14.02□□□□□ -0.16
LINC01140-206ENST00000484933 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.17
LINC01140-206ENST00000484933 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC01140-206ENST00000484933 ARAP1Q96P48 1450 aa14.02□□□□□ -0.17
LINC01140-206ENST00000484933 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
LINC01140-206ENST00000484933 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
LINC01140-206ENST00000484933 CUX2O14529 1486 aa14□□□□□ -0.17
LINC01140-206ENST00000484933 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
LINC01140-206ENST00000484933 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
LINC01140-206ENST00000484933 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
LINC01140-206ENST00000484933 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.17
LINC01140-206ENST00000484933 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.18
LINC01140-206ENST00000484933 LAS1LQ9Y4W2 734 aaKnown RBP13.95□□□□□ -0.18
LINC01140-206ENST00000484933 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
LINC01140-206ENST00000484933 PPP1R15AO75807 674 aaPredicted RBP13.94□□□□□ -0.18
LINC01140-206ENST00000484933 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
LINC01140-206ENST00000484933 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
LINC01140-206ENST00000484933 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
LINC01140-206ENST00000484933 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
LINC01140-206ENST00000484933 CHMP7Q8WUX9 453 aaPredicted RBP13.92□□□□□ -0.18
LINC01140-206ENST00000484933 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
LINC01140-206ENST00000484933 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
LINC01140-206ENST00000484933 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
LINC01140-206ENST00000484933 SETD5Q9C0A6 1442 aa13.91□□□□□ -0.18
LINC01140-206ENST00000484933 NEFMP07197 916 aa13.88□□□□□ -0.19
LINC01140-206ENST00000484933 BRPF3Q9ULD4 1205 aa13.88□□□□□ -0.19
LINC01140-206ENST00000484933 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
LINC01140-206ENST00000484933 SENP3-EIF4A1A0A087X0R7 540 aa13.87□□□□□ -0.19
LINC01140-206ENST00000484933 PRXQ9BXM0 1461 aa13.87□□□□□ -0.19
LINC01140-206ENST00000484933 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
LINC01140-206ENST00000484933 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
LINC01140-206ENST00000484933 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
LINC01140-206ENST00000484933 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
LINC01140-206ENST00000484933 ARHGAP35Q9NRY4 1499 aa13.85□□□□□ -0.19
LINC01140-206ENST00000484933 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
LINC01140-206ENST00000484933 PHLDB1Q86UU1 1377 aa13.85□□□□□ -0.19
LINC01140-206ENST00000484933 FAM9BQ8IZU0 186 aa13.84□□□□□ -0.19
LINC01140-206ENST00000484933 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
LINC01140-206ENST00000484933 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
LINC01140-206ENST00000484933 IGF1RP08069 1367 aa13.78□□□□□ -0.2
LINC01140-206ENST00000484933 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
LINC01140-206ENST00000484933 ERICH3Q5RHP9 1530 aa13.78□□□□□ -0.2
LINC01140-206ENST00000484933 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
LINC01140-206ENST00000484933 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
LINC01140-206ENST00000484933 CCDC184Q52MB2 194 aa13.76□□□□□ -0.21
LINC01140-206ENST00000484933 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
LINC01140-206ENST00000484933 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
LINC01140-206ENST00000484933 HSPA5P11021 654 aaKnown RBP13.71□□□□□ -0.21
LINC01140-206ENST00000484933 MRS2Q9HD23 443 aa13.71□□□□□ -0.21
LINC01140-206ENST00000484933 LRRC9Q6ZRR7 1453 aa13.71□□□□□ -0.21
LINC01140-206ENST00000484933 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
LINC01140-206ENST00000484933 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
LINC01140-206ENST00000484933 FHOD3Q2V2M9 1422 aa13.68□□□□□ -0.22
LINC01140-206ENST00000484933 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
LINC01140-206ENST00000484933 TIAM1Q13009 1591 aa13.68□□□□□ -0.22
LINC01140-206ENST00000484933 FOXD1Q16676 465 aa13.68□□□□□ -0.22
LINC01140-206ENST00000484933 WDR62O43379 1518 aa13.67□□□□□ -0.22
LINC01140-206ENST00000484933 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
LINC01140-206ENST00000484933 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
LINC01140-206ENST00000484933 IFT140Q96RY7 1462 aa13.66□□□□□ -0.22
LINC01140-206ENST00000484933 PRDM2Q13029 1718 aa13.65□□□□□ -0.22
LINC01140-206ENST00000484933 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
LINC01140-206ENST00000484933 EIF4G2P78344 907 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01140-206ENST00000484933 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
LINC01140-206ENST00000484933 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
LINC01140-206ENST00000484933 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
LINC01140-206ENST00000484933 GSE1Q14687 1217 aa13.63□□□□□ -0.23
LINC01140-206ENST00000484933 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
LINC01140-206ENST00000484933 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms