RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 LMTK3Q96Q04 1460 aa15.92■□□□□ 0.14
DDX39B-221ENST00000484566 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
DDX39B-221ENST00000484566 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
DDX39B-221ENST00000484566 SYNJ1O43426 1573 aa15.9■□□□□ 0.14
DDX39B-221ENST00000484566 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
DDX39B-221ENST00000484566 SOCS7O14512 581 aa15.89■□□□□ 0.13
DDX39B-221ENST00000484566 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
DDX39B-221ENST00000484566 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
DDX39B-221ENST00000484566 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
DDX39B-221ENST00000484566 SOGA1O94964 1423 aa15.86■□□□□ 0.13
DDX39B-221ENST00000484566 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
DDX39B-221ENST00000484566 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
DDX39B-221ENST00000484566 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
DDX39B-221ENST00000484566 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
DDX39B-221ENST00000484566 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.13
DDX39B-221ENST00000484566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
DDX39B-221ENST00000484566 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
DDX39B-221ENST00000484566 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
DDX39B-221ENST00000484566 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
DDX39B-221ENST00000484566 GRIN2BQ13224 1484 aa15.8■□□□□ 0.12
DDX39B-221ENST00000484566 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
DDX39B-221ENST00000484566 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
DDX39B-221ENST00000484566 ZBTB22O15209 634 aa15.77■□□□□ 0.12
DDX39B-221ENST00000484566 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
DDX39B-221ENST00000484566 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
DDX39B-221ENST00000484566 APLP2Q06481 763 aa15.74■□□□□ 0.11
DDX39B-221ENST00000484566 CUX1P39880 1505 aa15.73■□□□□ 0.11
DDX39B-221ENST00000484566 SAMD1Q6SPF0 538 aaPredicted RBP15.72■□□□□ 0.11
DDX39B-221ENST00000484566 KDM6BO15054 1643 aa15.68■□□□□ 0.1
DDX39B-221ENST00000484566 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
DDX39B-221ENST00000484566 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
DDX39B-221ENST00000484566 ADGRL1O94910 1474 aa15.64■□□□□ 0.09
DDX39B-221ENST00000484566 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
DDX39B-221ENST00000484566 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
DDX39B-221ENST00000484566 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
DDX39B-221ENST00000484566 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
DDX39B-221ENST00000484566 CEP170Q5SW79 1584 aa15.58■□□□□ 0.08
DDX39B-221ENST00000484566 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
DDX39B-221ENST00000484566 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
DDX39B-221ENST00000484566 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
DDX39B-221ENST00000484566 NUP160Q12769 1436 aa15.54■□□□□ 0.08
DDX39B-221ENST00000484566 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
DDX39B-221ENST00000484566 CAPN15O75808 1086 aa15.52■□□□□ 0.08
DDX39B-221ENST00000484566 DIP2BQ9P265 1576 aa15.5■□□□□ 0.07
DDX39B-221ENST00000484566 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
DDX39B-221ENST00000484566 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
DDX39B-221ENST00000484566 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
DDX39B-221ENST00000484566 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
DDX39B-221ENST00000484566 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
DDX39B-221ENST00000484566 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
DDX39B-221ENST00000484566 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
DDX39B-221ENST00000484566 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
DDX39B-221ENST00000484566 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
DDX39B-221ENST00000484566 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
DDX39B-221ENST00000484566 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
DDX39B-221ENST00000484566 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
DDX39B-221ENST00000484566 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
DDX39B-221ENST00000484566 ADCY10Q96PN6 1610 aa15.3■□□□□ 0.04
DDX39B-221ENST00000484566 SPATA31D1Q6ZQQ2 1576 aa15.28■□□□□ 0.04
DDX39B-221ENST00000484566 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
DDX39B-221ENST00000484566 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
DDX39B-221ENST00000484566 PPRC1Q5VV67 1664 aaKnown RBP15.25■□□□□ 0.03
DDX39B-221ENST00000484566 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
DDX39B-221ENST00000484566 CERKQ8TCT0 537 aa15.23■□□□□ 0.03
DDX39B-221ENST00000484566 DSG3P32926 999 aa15.21■□□□□ 0.03
DDX39B-221ENST00000484566 KIAA0586Q9BVV6 1533 aa15.21■□□□□ 0.03
DDX39B-221ENST00000484566 CUL7Q14999 1698 aa15.17■□□□□ 0.02
DDX39B-221ENST00000484566 ABCB7O75027 752 aa15.15■□□□□ 0.02
DDX39B-221ENST00000484566 PTPRGP23470 1445 aa15.13■□□□□ 0.01
DDX39B-221ENST00000484566 POLA2Q14181 598 aa15.12■□□□□ 0.01
DDX39B-221ENST00000484566 ABCC2Q92887 1545 aa15.12■□□□□ 0.01
DDX39B-221ENST00000484566 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
DDX39B-221ENST00000484566 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
DDX39B-221ENST00000484566 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
DDX39B-221ENST00000484566 GLI2P10070 1586 aa15.1■□□□□ 0.01
DDX39B-221ENST00000484566 ASXL2Q76L83 1435 aa15.09■□□□□ 0.01
DDX39B-221ENST00000484566 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
DDX39B-221ENST00000484566 IGF1RP08069 1367 aa15.08■□□□□ 0
DDX39B-221ENST00000484566 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
DDX39B-221ENST00000484566 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
DDX39B-221ENST00000484566 IQGAP2Q13576 1575 aa15.04■□□□□ -0
DDX39B-221ENST00000484566 UHRF1BP1LA0JNW5 1464 aa15.04■□□□□ -0
DDX39B-221ENST00000484566 PTPRMP28827 1452 aa15.03■□□□□ -0
DDX39B-221ENST00000484566 TEX14Q8IWB6 1497 aa15.03■□□□□ -0
DDX39B-221ENST00000484566 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
DDX39B-221ENST00000484566 CARMIL1Q5VZK9 1371 aa15.01□□□□□ -0.01
DDX39B-221ENST00000484566 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
DDX39B-221ENST00000484566 EPRSP07814 1512 aaKnown RBP15□□□□□ -0.01
DDX39B-221ENST00000484566 KIF21BO75037 1637 aa14.98□□□□□ -0.01
DDX39B-221ENST00000484566 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
DDX39B-221ENST00000484566 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
DDX39B-221ENST00000484566 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
DDX39B-221ENST00000484566 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
DDX39B-221ENST00000484566 DISP1Q96F81 1524 aa14.95□□□□□ -0.02
DDX39B-221ENST00000484566 HSPA2P54652 639 aa14.93□□□□□ -0.02
DDX39B-221ENST00000484566 WDR7Q9Y4E6 1490 aa14.91□□□□□ -0.02
DDX39B-221ENST00000484566 KIAA0556O60303 1618 aa14.91□□□□□ -0.02
DDX39B-221ENST00000484566 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
DDX39B-221ENST00000484566 CFAP43Q8NDM7 1665 aa14.87□□□□□ -0.03
DDX39B-221ENST00000484566 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms