RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 GRIN2BQ13224 1484 aa10.64□□□□□ -0.71
PDZRN3-209ENST00000484487 KIF21BO75037 1637 aa10.64□□□□□ -0.71
PDZRN3-209ENST00000484487 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDZRN3-209ENST00000484487 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
PDZRN3-209ENST00000484487 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
PDZRN3-209ENST00000484487 IGF1RP08069 1367 aa10.62□□□□□ -0.71
PDZRN3-209ENST00000484487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.71
PDZRN3-209ENST00000484487 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-209ENST00000484487 ADAMTS12P58397 1594 aa10.59□□□□□ -0.71
PDZRN3-209ENST00000484487 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
PDZRN3-209ENST00000484487 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
PDZRN3-209ENST00000484487 GOLGA3Q08378 1498 aa10.57□□□□□ -0.72
PDZRN3-209ENST00000484487 RAPGEF2Q9Y4G8 1499 aa10.57□□□□□ -0.72
PDZRN3-209ENST00000484487 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
PDZRN3-209ENST00000484487 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
PDZRN3-209ENST00000484487 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
PDZRN3-209ENST00000484487 CHD1O14646 1710 aa10.54□□□□□ -0.72
PDZRN3-209ENST00000484487 SYNJ2O15056 1496 aa10.54□□□□□ -0.72
PDZRN3-209ENST00000484487 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
PDZRN3-209ENST00000484487 CHMP7Q8WUX9 453 aaPredicted RBP10.5□□□□□ -0.73
PDZRN3-209ENST00000484487 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
PDZRN3-209ENST00000484487 LOC105371045A0A1W2PR82 267 aa10.48□□□□□ -0.73
PDZRN3-209ENST00000484487 C1QBPQ07021 282 aaKnown RBP10.48□□□□□ -0.73
PDZRN3-209ENST00000484487 TNIKQ9UKE5 1360 aa10.48□□□□□ -0.73
PDZRN3-209ENST00000484487 FBLN2P98095 1184 aa10.46□□□□□ -0.73
PDZRN3-209ENST00000484487 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.73
PDZRN3-209ENST00000484487 IQGAP2Q13576 1575 aa10.43□□□□□ -0.74
PDZRN3-209ENST00000484487 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
PDZRN3-209ENST00000484487 NUP160Q12769 1436 aa10.42□□□□□ -0.74
PDZRN3-209ENST00000484487 KIAA0586Q9BVV6 1533 aa10.42□□□□□ -0.74
PDZRN3-209ENST00000484487 EFCAB5A4FU69 1503 aa10.39□□□□□ -0.75
PDZRN3-209ENST00000484487 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
PDZRN3-209ENST00000484487 CLIP1P30622 1438 aa10.37□□□□□ -0.75
PDZRN3-209ENST00000484487 CLASP1Q7Z460 1538 aa10.37□□□□□ -0.75
PDZRN3-209ENST00000484487 UGGT2Q9NYU1 1516 aa10.37□□□□□ -0.75
PDZRN3-209ENST00000484487 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
PDZRN3-209ENST00000484487 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
PDZRN3-209ENST00000484487 SAMD9Q5K651 1589 aa10.35□□□□□ -0.75
PDZRN3-209ENST00000484487 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
PDZRN3-209ENST00000484487 SLC4A2P04920 1241 aa10.34□□□□□ -0.75
PDZRN3-209ENST00000484487 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
PDZRN3-209ENST00000484487 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
PDZRN3-209ENST00000484487 RANGAP1P46060 587 aaPredicted RBP10.32□□□□□ -0.76
PDZRN3-209ENST00000484487 KIAA0556O60303 1618 aa10.32□□□□□ -0.76
PDZRN3-209ENST00000484487 ARHGAP35Q9NRY4 1499 aa10.31□□□□□ -0.76
PDZRN3-209ENST00000484487 SLC4A1APQ9BWU0 796 aaKnown RBP10.31□□□□□ -0.76
PDZRN3-209ENST00000484487 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
PDZRN3-209ENST00000484487 FMN1Q68DA7 1419 aa10.27□□□□□ -0.77
PDZRN3-209ENST00000484487 PRG4Q92954 1404 aaPredicted RBP10.27□□□□□ -0.77
PDZRN3-209ENST00000484487 ARAP1Q96P48 1450 aa10.27□□□□□ -0.77
PDZRN3-209ENST00000484487 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
PDZRN3-209ENST00000484487 P3H3Q8IVL6 736 aa10.25□□□□□ -0.77
PDZRN3-209ENST00000484487 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
PDZRN3-209ENST00000484487 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
PDZRN3-209ENST00000484487 PTPRGP23470 1445 aa10.21□□□□□ -0.78
PDZRN3-209ENST00000484487 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
PDZRN3-209ENST00000484487 ERCC6L2Q5T890 1561 aa10.21□□□□□ -0.78
PDZRN3-209ENST00000484487 HECW1Q76N89 1606 aa10.21□□□□□ -0.78
PDZRN3-209ENST00000484487 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
PDZRN3-209ENST00000484487 CASKIN1Q8WXD9 1431 aa10.2□□□□□ -0.78
PDZRN3-209ENST00000484487 CAPN15O75808 1086 aa10.19□□□□□ -0.78
PDZRN3-209ENST00000484487 APLP2Q06481 763 aa10.19□□□□□ -0.78
PDZRN3-209ENST00000484487 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
PDZRN3-209ENST00000484487 CFAP43Q8NDM7 1665 aa10.18□□□□□ -0.78
PDZRN3-209ENST00000484487 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
PDZRN3-209ENST00000484487 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
PDZRN3-209ENST00000484487 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
PDZRN3-209ENST00000484487 ABCA8O94911 1581 aa10.18□□□□□ -0.78
PDZRN3-209ENST00000484487 ARHGEF11O15085 1522 aa10.17□□□□□ -0.78
PDZRN3-209ENST00000484487 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
PDZRN3-209ENST00000484487 MAP3K1Q13233 1512 aa10.17□□□□□ -0.78
PDZRN3-209ENST00000484487 CCDC18Q5T9S5 1454 aa10.17□□□□□ -0.78
PDZRN3-209ENST00000484487 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
PDZRN3-209ENST00000484487 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
PDZRN3-209ENST00000484487 UACAQ9BZF9 1416 aa10.15□□□□□ -0.79
PDZRN3-209ENST00000484487 TIAM1Q13009 1591 aa10.14□□□□□ -0.79
PDZRN3-209ENST00000484487 ABCC2Q92887 1545 aa10.14□□□□□ -0.79
PDZRN3-209ENST00000484487 UHRF1BP1LA0JNW5 1464 aa10.14□□□□□ -0.79
PDZRN3-209ENST00000484487 PLB1Q6P1J6 1458 aa10.13□□□□□ -0.79
PDZRN3-209ENST00000484487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
PDZRN3-209ENST00000484487 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
PDZRN3-209ENST00000484487 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
PDZRN3-209ENST00000484487 NUP153P49790 1475 aaKnown RBP10.11□□□□□ -0.79
PDZRN3-209ENST00000484487 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
PDZRN3-209ENST00000484487 CDK11AQ9UQ88 783 aaPredicted RBP10.1□□□□□ -0.79
PDZRN3-209ENST00000484487 ZCCHC11Q5TAX3 1644 aaKnown RBP10.1□□□□□ -0.79
PDZRN3-209ENST00000484487 SUPT6HQ7KZ85 1726 aaKnown RBP10.08□□□□□ -0.8
PDZRN3-209ENST00000484487 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
PDZRN3-209ENST00000484487 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
PDZRN3-209ENST00000484487 CDK13Q14004 1512 aaKnown RBP10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 EHBP1L1Q8N3D4 1523 aa10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 KDM5BQ9UGL1 1544 aa10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 ATP10BO94823 1461 aa10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 LRRC9Q6ZRR7 1453 aa10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 MYCNP04198 464 aaPredicted RBP10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 NPM1P06748 294 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 FOXD4L1Q9NU39 408 aa10.07□□□□□ -0.8
PDZRN3-209ENST00000484487 MTUS2Q5JR59 1369 aa10.06□□□□□ -0.8
PDZRN3-209ENST00000484487 CYB5RLQ6IPT4 315 aa10.05□□□□□ -0.8
PDZRN3-209ENST00000484487 PLEKHD1A6NEE1 506 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms