RNA–Protein interactions for RNA: ENST00000484425.6

FAM71F1-206, Transcript of family with sequence similarity 71 member F1, humanhuman

TSL 1 (best)

Gene FAM71F1, Length 1,818 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71F1-206ENST00000484425 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.53
FAM71F1-206ENST00000484425 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.54
FAM71F1-206ENST00000484425 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
FAM71F1-206ENST00000484425 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
FAM71F1-206ENST00000484425 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
FAM71F1-206ENST00000484425 CUL7Q14999 1698 aa11.68□□□□□ -0.54
FAM71F1-206ENST00000484425 GAPVD1Q14C86 1478 aa11.67□□□□□ -0.54
FAM71F1-206ENST00000484425 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
FAM71F1-206ENST00000484425 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
FAM71F1-206ENST00000484425 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
FAM71F1-206ENST00000484425 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.54
FAM71F1-206ENST00000484425 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
FAM71F1-206ENST00000484425 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
FAM71F1-206ENST00000484425 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
FAM71F1-206ENST00000484425 CLIP1P30622 1438 aa11.58□□□□□ -0.56
FAM71F1-206ENST00000484425 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.56
FAM71F1-206ENST00000484425 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
FAM71F1-206ENST00000484425 EIF4G3O43432 1585 aaKnown RBP11.56□□□□□ -0.56
FAM71F1-206ENST00000484425 FHAD1B1AJZ9 1412 aa11.55□□□□□ -0.56
FAM71F1-206ENST00000484425 ADAMTS12P58397 1594 aa11.54□□□□□ -0.56
FAM71F1-206ENST00000484425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.56
FAM71F1-206ENST00000484425 CTTNBP2Q8WZ74 1663 aa11.53□□□□□ -0.56
FAM71F1-206ENST00000484425 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
FAM71F1-206ENST00000484425 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
FAM71F1-206ENST00000484425 VPS8Q8N3P4 1428 aa11.49□□□□□ -0.57
FAM71F1-206ENST00000484425 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
FAM71F1-206ENST00000484425 ARAP1Q96P48 1450 aa11.47□□□□□ -0.57
FAM71F1-206ENST00000484425 RANGAP1P46060 587 aaPredicted RBP11.46□□□□□ -0.57
FAM71F1-206ENST00000484425 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.57
FAM71F1-206ENST00000484425 SYNJ2O15056 1496 aa11.45□□□□□ -0.58
FAM71F1-206ENST00000484425 GRIN2AQ12879 1464 aa11.44□□□□□ -0.58
FAM71F1-206ENST00000484425 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
FAM71F1-206ENST00000484425 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
FAM71F1-206ENST00000484425 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
FAM71F1-206ENST00000484425 U3KPZ7 1027 aaPredicted RBP11.4□□□□□ -0.58
FAM71F1-206ENST00000484425 SAMD9Q5K651 1589 aa11.4□□□□□ -0.59
FAM71F1-206ENST00000484425 KIAA0586Q9BVV6 1533 aa11.4□□□□□ -0.59
FAM71F1-206ENST00000484425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.39□□□□□ -0.59
FAM71F1-206ENST00000484425 APLP2Q06481 763 aa11.39□□□□□ -0.59
FAM71F1-206ENST00000484425 HNRNPUL2Q1KMD3 747 aaKnown RBP11.39□□□□□ -0.59
FAM71F1-206ENST00000484425 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
FAM71F1-206ENST00000484425 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
FAM71F1-206ENST00000484425 NUP160Q12769 1436 aa11.36□□□□□ -0.59
FAM71F1-206ENST00000484425 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
FAM71F1-206ENST00000484425 CEP170Q5SW79 1584 aa11.36□□□□□ -0.59
FAM71F1-206ENST00000484425 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
FAM71F1-206ENST00000484425 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
FAM71F1-206ENST00000484425 FMN1Q68DA7 1419 aa11.35□□□□□ -0.59
FAM71F1-206ENST00000484425 FBLN2P98095 1184 aa11.34□□□□□ -0.59
FAM71F1-206ENST00000484425 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
FAM71F1-206ENST00000484425 MAP3K1Q13233 1512 aa11.33□□□□□ -0.6
FAM71F1-206ENST00000484425 CHD1O14646 1710 aa11.32□□□□□ -0.6
FAM71F1-206ENST00000484425 PPARGC1BQ86YN6 1023 aaKnown RBP11.32□□□□□ -0.6
FAM71F1-206ENST00000484425 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
FAM71F1-206ENST00000484425 CASKIN1Q8WXD9 1431 aa11.31□□□□□ -0.6
FAM71F1-206ENST00000484425 PCF11O94913 1555 aaKnown RBP11.31□□□□□ -0.6
FAM71F1-206ENST00000484425 KIAA0556O60303 1618 aa11.29□□□□□ -0.6
FAM71F1-206ENST00000484425 DISP1Q96F81 1524 aa11.28□□□□□ -0.6
FAM71F1-206ENST00000484425 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
FAM71F1-206ENST00000484425 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
FAM71F1-206ENST00000484425 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
FAM71F1-206ENST00000484425 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
FAM71F1-206ENST00000484425 FKBP8Q14318 412 aa11.23□□□□□ -0.61
FAM71F1-206ENST00000484425 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
FAM71F1-206ENST00000484425 HECW1Q76N89 1606 aa11.23□□□□□ -0.61
FAM71F1-206ENST00000484425 KANK4Q5T7N3 995 aaPredicted RBP11.23□□□□□ -0.61
FAM71F1-206ENST00000484425 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
FAM71F1-206ENST00000484425 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
FAM71F1-206ENST00000484425 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
FAM71F1-206ENST00000484425 CCDC18Q5T9S5 1454 aa11.21□□□□□ -0.61
FAM71F1-206ENST00000484425 CLASP1Q7Z460 1538 aa11.2□□□□□ -0.62
FAM71F1-206ENST00000484425 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
FAM71F1-206ENST00000484425 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
FAM71F1-206ENST00000484425 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
FAM71F1-206ENST00000484425 EPRSP07814 1512 aaKnown RBP11.17□□□□□ -0.62
FAM71F1-206ENST00000484425 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
FAM71F1-206ENST00000484425 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.62
FAM71F1-206ENST00000484425 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.63
FAM71F1-206ENST00000484425 NUP153P49790 1475 aaKnown RBP11.14□□□□□ -0.63
FAM71F1-206ENST00000484425 ABCA8O94911 1581 aa11.14□□□□□ -0.63
FAM71F1-206ENST00000484425 PTPRGP23470 1445 aa11.13□□□□□ -0.63
FAM71F1-206ENST00000484425 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
FAM71F1-206ENST00000484425 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
FAM71F1-206ENST00000484425 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
FAM71F1-206ENST00000484425 CDK13Q14004 1512 aaKnown RBP11.11□□□□□ -0.63
FAM71F1-206ENST00000484425 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
FAM71F1-206ENST00000484425 CDK11AQ9UQ88 783 aaPredicted RBP11.1□□□□□ -0.63
FAM71F1-206ENST00000484425 PHLDB1Q86UU1 1377 aa11.1□□□□□ -0.63
FAM71F1-206ENST00000484425 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
FAM71F1-206ENST00000484425 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
FAM71F1-206ENST00000484425 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.63
FAM71F1-206ENST00000484425 NCOA2Q15596 1464 aa11.08□□□□□ -0.64
FAM71F1-206ENST00000484425 ARHGEF11O15085 1522 aa11.08□□□□□ -0.64
FAM71F1-206ENST00000484425 UACAQ9BZF9 1416 aa11.07□□□□□ -0.64
FAM71F1-206ENST00000484425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.06□□□□□ -0.64
FAM71F1-206ENST00000484425 TROQ12816 1431 aaPredicted RBP11.05□□□□□ -0.64
FAM71F1-206ENST00000484425 ATP10BO94823 1461 aa11.05□□□□□ -0.64
FAM71F1-206ENST00000484425 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
FAM71F1-206ENST00000484425 ABCC2Q92887 1545 aa11.05□□□□□ -0.64
FAM71F1-206ENST00000484425 FGD6Q6ZV73 1430 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms