RNA–Protein interactions for RNA: ENST00000484300.1

GCOM1-209, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-209ENST00000484300 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
GCOM1-209ENST00000484300 PRDM2Q13029 1718 aa9.08□□□□□ -0.96
GCOM1-209ENST00000484300 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
GCOM1-209ENST00000484300 MIER1Q8N108 512 aa9.08□□□□□ -0.96
GCOM1-209ENST00000484300 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
GCOM1-209ENST00000484300 ERCC6Q03468 1493 aa9.06□□□□□ -0.96
GCOM1-209ENST00000484300 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
GCOM1-209ENST00000484300 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
GCOM1-209ENST00000484300 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
GCOM1-209ENST00000484300 IFNLR1Q8IU57 520 aaPredicted RBP9.04□□□□□ -0.96
GCOM1-209ENST00000484300 THOC2Q8NI27 1593 aaKnown RBP9.03□□□□□ -0.96
GCOM1-209ENST00000484300 PRR29P0C7W0 189 aa9.02□□□□□ -0.97
GCOM1-209ENST00000484300 PITPNM1O00562 1244 aa9□□□□□ -0.97
GCOM1-209ENST00000484300 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
GCOM1-209ENST00000484300 CADPSQ9ULU8 1353 aa8.98□□□□□ -0.97
GCOM1-209ENST00000484300 CCDC88BA6NC98 1476 aa8.97□□□□□ -0.97
GCOM1-209ENST00000484300 CUX2O14529 1486 aa8.96□□□□□ -0.98
GCOM1-209ENST00000484300 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
GCOM1-209ENST00000484300 CFTRP13569 1480 aa8.95□□□□□ -0.98
GCOM1-209ENST00000484300 PDS5BQ9NTI5 1447 aa8.94□□□□□ -0.98
GCOM1-209ENST00000484300 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
GCOM1-209ENST00000484300 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
GCOM1-209ENST00000484300 MRC2Q9UBG0 1479 aa8.91□□□□□ -0.98
GCOM1-209ENST00000484300 CEP164Q9UPV0 1460 aa8.91□□□□□ -0.98
GCOM1-209ENST00000484300 WDR62O43379 1518 aa8.9□□□□□ -0.98
GCOM1-209ENST00000484300 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
GCOM1-209ENST00000484300 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
GCOM1-209ENST00000484300 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
GCOM1-209ENST00000484300 CHADLQ6NUI6 762 aa8.84□□□□□ -0.99
GCOM1-209ENST00000484300 CIZ1Q9ULV3 898 aaPredicted RBP8.83□□□□□ -1
GCOM1-209ENST00000484300 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
GCOM1-209ENST00000484300 TOPBP1Q92547 1522 aa8.8□□□□□ -1
GCOM1-209ENST00000484300 DNMBPQ6XZF7 1577 aa8.79□□□□□ -1
GCOM1-209ENST00000484300 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
GCOM1-209ENST00000484300 MNX1P50219 401 aaPredicted RBP8.78□□□□□ -1
GCOM1-209ENST00000484300 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
GCOM1-209ENST00000484300 ECM2O94769 699 aaPredicted RBP8.77□□□□□ -1.01
GCOM1-209ENST00000484300 PKD2Q13563 968 aa8.77□□□□□ -1.01
GCOM1-209ENST00000484300 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
GCOM1-209ENST00000484300 DCAF8Q5TAQ9 597 aa8.76□□□□□ -1.01
GCOM1-209ENST00000484300 WDR97A6NE52 1622 aa8.76□□□□□ -1.01
GCOM1-209ENST00000484300 NUBP1P53384 320 aa8.75□□□□□ -1.01
GCOM1-209ENST00000484300 ZNF608Q9ULD9 1512 aaPredicted RBP8.75□□□□□ -1.01
GCOM1-209ENST00000484300 TARBP1Q13395 1621 aaKnown RBP8.74□□□□□ -1.01
GCOM1-209ENST00000484300 FAM212AQ96EL1 285 aa8.74□□□□□ -1.01
GCOM1-209ENST00000484300 FARP1Q9Y4F1 1045 aaPredicted RBP8.74□□□□□ -1.01
GCOM1-209ENST00000484300 CUX1P39880 1505 aa8.74□□□□□ -1.01
GCOM1-209ENST00000484300 GSE1Q14687 1217 aa8.73□□□□□ -1.01
GCOM1-209ENST00000484300 EIF4G3O43432 1585 aaKnown RBP8.73□□□□□ -1.01
GCOM1-209ENST00000484300 BIVM-ERCC5R4GMW8 1640 aa8.72□□□□□ -1.01
GCOM1-209ENST00000484300 POLA1P09884 1462 aaPredicted RBP8.71□□□□□ -1.01
GCOM1-209ENST00000484300 ABCC8Q09428 1581 aa8.71□□□□□ -1.02
GCOM1-209ENST00000484300 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.02
GCOM1-209ENST00000484300 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
GCOM1-209ENST00000484300 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
GCOM1-209ENST00000484300 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
GCOM1-209ENST00000484300 RASEFQ8IZ41 740 aa8.7□□□□□ -1.02
GCOM1-209ENST00000484300 SYNJ1O43426 1573 aa8.69□□□□□ -1.02
GCOM1-209ENST00000484300 CHD1O14646 1710 aa8.68□□□□□ -1.02
GCOM1-209ENST00000484300 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
GCOM1-209ENST00000484300 TSPYL2Q9H2G4 693 aaPredicted RBP8.67□□□□□ -1.02
GCOM1-209ENST00000484300 PBRM1Q86U86 1689 aa8.66□□□□□ -1.02
GCOM1-209ENST00000484300 TOP2BQ02880 1626 aa8.66□□□□□ -1.02
GCOM1-209ENST00000484300 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.02
GCOM1-209ENST00000484300 SOGA1O94964 1423 aa8.64□□□□□ -1.03
GCOM1-209ENST00000484300 ABCA5Q8WWZ7 1642 aa8.64□□□□□ -1.03
GCOM1-209ENST00000484300 HAX1O00165 279 aa8.63□□□□□ -1.03
GCOM1-209ENST00000484300 RGL2O15211 777 aa8.63□□□□□ -1.03
GCOM1-209ENST00000484300 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
GCOM1-209ENST00000484300 SP7Q8TDD2 431 aaPredicted RBP8.63□□□□□ -1.03
GCOM1-209ENST00000484300 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
GCOM1-209ENST00000484300 PYGBP11216 843 aa8.61□□□□□ -1.03
GCOM1-209ENST00000484300 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
GCOM1-209ENST00000484300 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
GCOM1-209ENST00000484300 ABCA10Q8WWZ4 1543 aa8.58□□□□□ -1.04
GCOM1-209ENST00000484300 CD44P16070 742 aaKnown RBP8.56□□□□□ -1.04
GCOM1-209ENST00000484300 GRIN2BQ13224 1484 aa8.55□□□□□ -1.04
GCOM1-209ENST00000484300 GAPVD1Q14C86 1478 aa8.55□□□□□ -1.04
GCOM1-209ENST00000484300 RIMBP3CA6NJZ7 1639 aa8.54□□□□□ -1.04
GCOM1-209ENST00000484300 RIMBP3BA6NNM3 1639 aa8.54□□□□□ -1.04
GCOM1-209ENST00000484300 RIMBP3Q9UFD9 1639 aa8.54□□□□□ -1.04
GCOM1-209ENST00000484300 RIOK3O14730 519 aaKnown RBP8.54□□□□□ -1.04
GCOM1-209ENST00000484300 CHRM1P11229 460 aaPredicted RBP8.54□□□□□ -1.04
GCOM1-209ENST00000484300 EVX2Q03828 476 aa8.54□□□□□ -1.04
GCOM1-209ENST00000484300 ZRANB1Q9UGI0 708 aa8.54□□□□□ -1.04
GCOM1-209ENST00000484300 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
GCOM1-209ENST00000484300 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
GCOM1-209ENST00000484300 TAOK2Q9UL54 1235 aa8.53□□□□□ -1.04
GCOM1-209ENST00000484300 MAGI1Q96QZ7 1491 aaPredicted RBP8.52□□□□□ -1.05
GCOM1-209ENST00000484300 CHGAP10645 457 aaKnown RBP8.52□□□□□ -1.05
GCOM1-209ENST00000484300 CCDC61Q9Y6R9 512 aa8.52□□□□□ -1.05
GCOM1-209ENST00000484300 CLASP1Q7Z460 1538 aa8.5□□□□□ -1.05
GCOM1-209ENST00000484300 SYNJ2O15056 1496 aa8.5□□□□□ -1.05
GCOM1-209ENST00000484300 ARHGEF11O15085 1522 aa8.49□□□□□ -1.05
GCOM1-209ENST00000484300 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
GCOM1-209ENST00000484300 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
GCOM1-209ENST00000484300 ERICH3Q5RHP9 1530 aa8.48□□□□□ -1.05
GCOM1-209ENST00000484300 CEP170Q5SW79 1584 aa8.48□□□□□ -1.05
GCOM1-209ENST00000484300 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
GCOM1-209ENST00000484300 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms