RNA–Protein interactions for RNA: ENST00000484300.1

GCOM1-209, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-209ENST00000484300 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
GCOM1-209ENST00000484300 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
GCOM1-209ENST00000484300 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
GCOM1-209ENST00000484300 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
GCOM1-209ENST00000484300 PLPPR3Q6T4P5 718 aa13.22□□□□□ -0.29
GCOM1-209ENST00000484300 FOXD1Q16676 465 aa12.89□□□□□ -0.35
GCOM1-209ENST00000484300 ADRA2BP18089 450 aa12.55□□□□□ -0.4
GCOM1-209ENST00000484300 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
GCOM1-209ENST00000484300 PIAS4Q8N2W9 510 aaPredicted RBP12.25□□□□□ -0.45
GCOM1-209ENST00000484300 NISCHQ9Y2I1 1504 aa12.04□□□□□ -0.48
GCOM1-209ENST00000484300 MSH5O43196 834 aa12.01□□□□□ -0.49
GCOM1-209ENST00000484300 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
GCOM1-209ENST00000484300 PPP4R3CPQ6ZMV5 832 aa11.67□□□□□ -0.54
GCOM1-209ENST00000484300 KCNA4P22459 653 aa11.57□□□□□ -0.56
GCOM1-209ENST00000484300 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
GCOM1-209ENST00000484300 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
GCOM1-209ENST00000484300 MAPK8IP2Q13387 824 aaPredicted RBP11.34□□□□□ -0.59
GCOM1-209ENST00000484300 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
GCOM1-209ENST00000484300 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
GCOM1-209ENST00000484300 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
GCOM1-209ENST00000484300 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
GCOM1-209ENST00000484300 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
GCOM1-209ENST00000484300 EHMT2Q96KQ7 1210 aa10.97□□□□□ -0.65
GCOM1-209ENST00000484300 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
GCOM1-209ENST00000484300 CCDC180Q9P1Z9 1646 aa10.83□□□□□ -0.68
GCOM1-209ENST00000484300 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
GCOM1-209ENST00000484300 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
GCOM1-209ENST00000484300 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
GCOM1-209ENST00000484300 ZBTB22O15209 634 aa10.62□□□□□ -0.71
GCOM1-209ENST00000484300 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
GCOM1-209ENST00000484300 ABCC9O60706 1549 aa10.57□□□□□ -0.72
GCOM1-209ENST00000484300 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
GCOM1-209ENST00000484300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.51□□□□□ -0.73
GCOM1-209ENST00000484300 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
GCOM1-209ENST00000484300 CACNB1Q02641 598 aaPredicted RBP10.35□□□□□ -0.75
GCOM1-209ENST00000484300 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
GCOM1-209ENST00000484300 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
GCOM1-209ENST00000484300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
GCOM1-209ENST00000484300 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
GCOM1-209ENST00000484300 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.77
GCOM1-209ENST00000484300 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
GCOM1-209ENST00000484300 APLP2Q06481 763 aa10.12□□□□□ -0.79
GCOM1-209ENST00000484300 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
GCOM1-209ENST00000484300 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
GCOM1-209ENST00000484300 ATF5Q9Y2D1 282 aaPredicted RBP10.08□□□□□ -0.8
GCOM1-209ENST00000484300 ZCCHC6Q5VYS8 1495 aaKnown RBP10.08□□□□□ -0.8
GCOM1-209ENST00000484300 NACADO15069 1562 aa10.06□□□□□ -0.8
GCOM1-209ENST00000484300 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
GCOM1-209ENST00000484300 UNC13AQ9UPW8 1703 aa10.05□□□□□ -0.8
GCOM1-209ENST00000484300 DCAF8L2P0C7V8 631 aa10.04□□□□□ -0.8
GCOM1-209ENST00000484300 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.81
GCOM1-209ENST00000484300 CAPN15O75808 1086 aa10□□□□□ -0.81
GCOM1-209ENST00000484300 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
GCOM1-209ENST00000484300 TRHP20396 242 aaPredicted RBP9.98□□□□□ -0.81
GCOM1-209ENST00000484300 ZNF219Q9P2Y4 722 aaPredicted RBP9.94□□□□□ -0.82
GCOM1-209ENST00000484300 BICRAQ9NZM4 1560 aa9.87□□□□□ -0.83
GCOM1-209ENST00000484300 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
GCOM1-209ENST00000484300 PABPN1Q86U42 306 aaKnown RBP eCLIP9.83□□□□□ -0.84
GCOM1-209ENST00000484300 POLA2Q14181 598 aa9.82□□□□□ -0.84
GCOM1-209ENST00000484300 ABCB7O75027 752 aa9.81□□□□□ -0.84
GCOM1-209ENST00000484300 DSG3P32926 999 aa9.71□□□□□ -0.86
GCOM1-209ENST00000484300 FBLN2P98095 1184 aa9.71□□□□□ -0.86
GCOM1-209ENST00000484300 FKBP8Q14318 412 aa9.71□□□□□ -0.86
GCOM1-209ENST00000484300 SHROOM4Q9ULL8 1493 aa9.71□□□□□ -0.86
GCOM1-209ENST00000484300 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
GCOM1-209ENST00000484300 MKRN4PQ13434 485 aaPredicted RBP9.64□□□□□ -0.87
GCOM1-209ENST00000484300 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
GCOM1-209ENST00000484300 CC2D2AQ9P2K1 1620 aa9.57□□□□□ -0.88
GCOM1-209ENST00000484300 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
GCOM1-209ENST00000484300 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
GCOM1-209ENST00000484300 CECR2Q9BXF3 1484 aa9.46□□□□□ -0.9
GCOM1-209ENST00000484300 ZNF692Q9BU19 519 aaPredicted RBP9.42□□□□□ -0.9
GCOM1-209ENST00000484300 SMARCA4P51532 1647 aa9.39□□□□□ -0.91
GCOM1-209ENST00000484300 SPDYE2BA6NHP3 402 aa9.39□□□□□ -0.91
GCOM1-209ENST00000484300 SPDYE6P0CI01 402 aa9.39□□□□□ -0.91
GCOM1-209ENST00000484300 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
GCOM1-209ENST00000484300 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
GCOM1-209ENST00000484300 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
GCOM1-209ENST00000484300 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
GCOM1-209ENST00000484300 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
GCOM1-209ENST00000484300 PROM2Q8N271 834 aa9.31□□□□□ -0.92
GCOM1-209ENST00000484300 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
GCOM1-209ENST00000484300 ATAD2BQ9ULI0 1458 aa9.29□□□□□ -0.92
GCOM1-209ENST00000484300 RBM42Q9BTD8 480 aaKnown RBP9.29□□□□□ -0.92
GCOM1-209ENST00000484300 HMGXB3Q12766 1538 aa9.28□□□□□ -0.92
GCOM1-209ENST00000484300 WIZO95785 1651 aa9.27□□□□□ -0.93
GCOM1-209ENST00000484300 SMARCA2P51531 1590 aa9.27□□□□□ -0.93
GCOM1-209ENST00000484300 NCAPD3P42695 1498 aa9.26□□□□□ -0.93
GCOM1-209ENST00000484300 POTEHQ6S545 545 aa9.22□□□□□ -0.93
GCOM1-209ENST00000484300 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
GCOM1-209ENST00000484300 AKT1S1Q96B36 256 aa9.18□□□□□ -0.94
GCOM1-209ENST00000484300 VASPP50552 380 aaPredicted RBP9.17□□□□□ -0.94
GCOM1-209ENST00000484300 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
GCOM1-209ENST00000484300 NESP48681 1621 aa9.16□□□□□ -0.94
GCOM1-209ENST00000484300 RSF1Q96T23 1441 aaPredicted RBP9.14□□□□□ -0.95
GCOM1-209ENST00000484300 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
GCOM1-209ENST00000484300 TOP2AP11388 1531 aaKnown RBP9.11□□□□□ -0.95
GCOM1-209ENST00000484300 SPDYE1Q8NFV5 336 aaPredicted RBP9.11□□□□□ -0.95
GCOM1-209ENST00000484300 KIF21AQ7Z4S6 1674 aa9.1□□□□□ -0.95
GCOM1-209ENST00000484300 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms