RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
SNX12-204ENST00000483560 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
SNX12-204ENST00000483560 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
SNX12-204ENST00000483560 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
SNX12-204ENST00000483560 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
SNX12-204ENST00000483560 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
SNX12-204ENST00000483560 CFTRP13569 1480 aa11.53□□□□□ -0.56
SNX12-204ENST00000483560 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
SNX12-204ENST00000483560 WDR62O43379 1518 aa11.48□□□□□ -0.57
SNX12-204ENST00000483560 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
SNX12-204ENST00000483560 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
SNX12-204ENST00000483560 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
SNX12-204ENST00000483560 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
SNX12-204ENST00000483560 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
SNX12-204ENST00000483560 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
SNX12-204ENST00000483560 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
SNX12-204ENST00000483560 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
SNX12-204ENST00000483560 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
SNX12-204ENST00000483560 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
SNX12-204ENST00000483560 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
SNX12-204ENST00000483560 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
SNX12-204ENST00000483560 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
SNX12-204ENST00000483560 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
SNX12-204ENST00000483560 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
SNX12-204ENST00000483560 SOGA1O94964 1423 aa11.27□□□□□ -0.6
SNX12-204ENST00000483560 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
SNX12-204ENST00000483560 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
SNX12-204ENST00000483560 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
SNX12-204ENST00000483560 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
SNX12-204ENST00000483560 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNX12-204ENST00000483560 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
SNX12-204ENST00000483560 MIER1Q8N108 512 aa11.22□□□□□ -0.61
SNX12-204ENST00000483560 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
SNX12-204ENST00000483560 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
SNX12-204ENST00000483560 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
SNX12-204ENST00000483560 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
SNX12-204ENST00000483560 FGD5Q6ZNL6 1462 aa11.19□□□□□ -0.62
SNX12-204ENST00000483560 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
SNX12-204ENST00000483560 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
SNX12-204ENST00000483560 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
SNX12-204ENST00000483560 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
SNX12-204ENST00000483560 CUX1P39880 1505 aa11.14□□□□□ -0.63
SNX12-204ENST00000483560 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
SNX12-204ENST00000483560 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
SNX12-204ENST00000483560 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNX12-204ENST00000483560 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
SNX12-204ENST00000483560 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
SNX12-204ENST00000483560 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
SNX12-204ENST00000483560 CHD1O14646 1710 aa11.1□□□□□ -0.63
SNX12-204ENST00000483560 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
SNX12-204ENST00000483560 GAPVD1Q14C86 1478 aa11.09□□□□□ -0.63
SNX12-204ENST00000483560 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
SNX12-204ENST00000483560 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
SNX12-204ENST00000483560 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
SNX12-204ENST00000483560 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
SNX12-204ENST00000483560 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SNX12-204ENST00000483560 MAGI1Q96QZ7 1491 aaPredicted RBP11.04□□□□□ -0.64
SNX12-204ENST00000483560 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
SNX12-204ENST00000483560 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
SNX12-204ENST00000483560 SYNJ2O15056 1496 aa11.02□□□□□ -0.65
SNX12-204ENST00000483560 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
SNX12-204ENST00000483560 AMER1Q5JTC6 1135 aaPredicted RBP11□□□□□ -0.65
SNX12-204ENST00000483560 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX12-204ENST00000483560 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
SNX12-204ENST00000483560 FHAD1B1AJZ9 1412 aa10.97□□□□□ -0.65
SNX12-204ENST00000483560 SYNJ1O43426 1573 aa10.97□□□□□ -0.65
SNX12-204ENST00000483560 WDR97A6NE52 1622 aa10.97□□□□□ -0.65
SNX12-204ENST00000483560 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
SNX12-204ENST00000483560 KIF27Q86VH2 1401 aa10.96□□□□□ -0.65
SNX12-204ENST00000483560 ILDR1Q86SU0 546 aaPredicted RBP10.96□□□□□ -0.65
SNX12-204ENST00000483560 TTBK1Q5TCY1 1321 aaPredicted RBP10.95□□□□□ -0.66
SNX12-204ENST00000483560 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
SNX12-204ENST00000483560 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
SNX12-204ENST00000483560 GRIN2AQ12879 1464 aa10.92□□□□□ -0.66
SNX12-204ENST00000483560 NUBP1P53384 320 aa10.91□□□□□ -0.66
SNX12-204ENST00000483560 JPH4Q96JJ6 628 aa10.91□□□□□ -0.66
SNX12-204ENST00000483560 IGF1RP08069 1367 aa10.9□□□□□ -0.66
SNX12-204ENST00000483560 ERICH3Q5RHP9 1530 aa10.88□□□□□ -0.67
SNX12-204ENST00000483560 CARMIL1Q5VZK9 1371 aa10.88□□□□□ -0.67
SNX12-204ENST00000483560 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
SNX12-204ENST00000483560 BIVM-ERCC5R4GMW8 1640 aa10.87□□□□□ -0.67
SNX12-204ENST00000483560 PRG4Q92954 1404 aaPredicted RBP10.86□□□□□ -0.67
SNX12-204ENST00000483560 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
SNX12-204ENST00000483560 NUP160Q12769 1436 aa10.84□□□□□ -0.67
SNX12-204ENST00000483560 GSE1Q14687 1217 aa10.84□□□□□ -0.67
SNX12-204ENST00000483560 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
SNX12-204ENST00000483560 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
SNX12-204ENST00000483560 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
SNX12-204ENST00000483560 ADAMTS12P58397 1594 aa10.84□□□□□ -0.67
SNX12-204ENST00000483560 DCAF8Q5TAQ9 597 aa10.83□□□□□ -0.68
SNX12-204ENST00000483560 FAM69CQ0P6D2 419 aa10.82□□□□□ -0.68
SNX12-204ENST00000483560 PBRM1Q86U86 1689 aa10.81□□□□□ -0.68
SNX12-204ENST00000483560 PKD2Q13563 968 aa10.8□□□□□ -0.68
SNX12-204ENST00000483560 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
SNX12-204ENST00000483560 RANGAP1P46060 587 aaPredicted RBP10.79□□□□□ -0.68
SNX12-204ENST00000483560 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
SNX12-204ENST00000483560 ERCC6L2Q5T890 1561 aa10.78□□□□□ -0.68
SNX12-204ENST00000483560 CARMIL2Q6F5E8 1435 aa10.77□□□□□ -0.68
SNX12-204ENST00000483560 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
SNX12-204ENST00000483560 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms