RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
SNX12-204ENST00000483560 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
SNX12-204ENST00000483560 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
SNX12-204ENST00000483560 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
SNX12-204ENST00000483560 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
SNX12-204ENST00000483560 FOXD1Q16676 465 aa16.3■□□□□ 0.2
SNX12-204ENST00000483560 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
SNX12-204ENST00000483560 ADRA2BP18089 450 aa15.73■□□□□ 0.11
SNX12-204ENST00000483560 NISCHQ9Y2I1 1504 aa15.4■□□□□ 0.06
SNX12-204ENST00000483560 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
SNX12-204ENST00000483560 MSH5O43196 834 aa15.04■□□□□ -0
SNX12-204ENST00000483560 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
SNX12-204ENST00000483560 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
SNX12-204ENST00000483560 KCNA4P22459 653 aa14.31□□□□□ -0.12
SNX12-204ENST00000483560 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
SNX12-204ENST00000483560 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
SNX12-204ENST00000483560 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
SNX12-204ENST00000483560 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
SNX12-204ENST00000483560 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
SNX12-204ENST00000483560 ABCC9O60706 1549 aa13.96□□□□□ -0.17
SNX12-204ENST00000483560 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
SNX12-204ENST00000483560 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
SNX12-204ENST00000483560 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
SNX12-204ENST00000483560 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
SNX12-204ENST00000483560 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
SNX12-204ENST00000483560 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
SNX12-204ENST00000483560 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
SNX12-204ENST00000483560 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
SNX12-204ENST00000483560 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
SNX12-204ENST00000483560 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
SNX12-204ENST00000483560 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
SNX12-204ENST00000483560 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
SNX12-204ENST00000483560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX12-204ENST00000483560 ZBTB22O15209 634 aa13.15□□□□□ -0.3
SNX12-204ENST00000483560 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
SNX12-204ENST00000483560 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
SNX12-204ENST00000483560 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
SNX12-204ENST00000483560 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
SNX12-204ENST00000483560 NACADO15069 1562 aa12.93□□□□□ -0.34
SNX12-204ENST00000483560 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
SNX12-204ENST00000483560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
SNX12-204ENST00000483560 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
SNX12-204ENST00000483560 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
SNX12-204ENST00000483560 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.37
SNX12-204ENST00000483560 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
SNX12-204ENST00000483560 MYO15BQ96JP2 1530 aa12.74□□□□□ -0.37
SNX12-204ENST00000483560 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
SNX12-204ENST00000483560 APLP2Q06481 763 aa12.7□□□□□ -0.38
SNX12-204ENST00000483560 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
SNX12-204ENST00000483560 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
SNX12-204ENST00000483560 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
SNX12-204ENST00000483560 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
SNX12-204ENST00000483560 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
SNX12-204ENST00000483560 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
SNX12-204ENST00000483560 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
SNX12-204ENST00000483560 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
SNX12-204ENST00000483560 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
SNX12-204ENST00000483560 CAPN15O75808 1086 aa12.51□□□□□ -0.41
SNX12-204ENST00000483560 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
SNX12-204ENST00000483560 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
SNX12-204ENST00000483560 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
SNX12-204ENST00000483560 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
SNX12-204ENST00000483560 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
SNX12-204ENST00000483560 DSG3P32926 999 aa12.28□□□□□ -0.44
SNX12-204ENST00000483560 POLA2Q14181 598 aa12.28□□□□□ -0.44
SNX12-204ENST00000483560 ABCB7O75027 752 aa12.25□□□□□ -0.45
SNX12-204ENST00000483560 CUX2O14529 1486 aa12.14□□□□□ -0.47
SNX12-204ENST00000483560 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
SNX12-204ENST00000483560 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
SNX12-204ENST00000483560 FBLN2P98095 1184 aa12.09□□□□□ -0.47
SNX12-204ENST00000483560 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
SNX12-204ENST00000483560 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
SNX12-204ENST00000483560 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
SNX12-204ENST00000483560 NCAPD3P42695 1498 aa11.98□□□□□ -0.49
SNX12-204ENST00000483560 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.49
SNX12-204ENST00000483560 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
SNX12-204ENST00000483560 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
SNX12-204ENST00000483560 SMARCA4P51532 1647 aa11.9□□□□□ -0.5
SNX12-204ENST00000483560 FKBP8Q14318 412 aa11.9□□□□□ -0.5
SNX12-204ENST00000483560 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
SNX12-204ENST00000483560 OSCARQ8IYS5 282 aa11.84□□□□□ -0.51
SNX12-204ENST00000483560 NESP48681 1621 aa11.83□□□□□ -0.52
SNX12-204ENST00000483560 HMGXB3Q12766 1538 aa11.83□□□□□ -0.52
SNX12-204ENST00000483560 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
SNX12-204ENST00000483560 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
SNX12-204ENST00000483560 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
SNX12-204ENST00000483560 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
SNX12-204ENST00000483560 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
SNX12-204ENST00000483560 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
SNX12-204ENST00000483560 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
SNX12-204ENST00000483560 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
SNX12-204ENST00000483560 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
SNX12-204ENST00000483560 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
SNX12-204ENST00000483560 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
SNX12-204ENST00000483560 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
SNX12-204ENST00000483560 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
SNX12-204ENST00000483560 WIZO95785 1651 aa11.66□□□□□ -0.54
SNX12-204ENST00000483560 PROM2Q8N271 834 aa11.64□□□□□ -0.55
SNX12-204ENST00000483560 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
SNX12-204ENST00000483560 KIF21AQ7Z4S6 1674 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms