RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
CAPN8-208ENST00000482183 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
CAPN8-208ENST00000482183 CASKIN1Q8WXD9 1431 aa14.73□□□□□ -0.05
CAPN8-208ENST00000482183 WDR97A6NE52 1622 aa14.73□□□□□ -0.05
CAPN8-208ENST00000482183 CTTNBP2Q8WZ74 1663 aa14.72□□□□□ -0.05
CAPN8-208ENST00000482183 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
CAPN8-208ENST00000482183 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
CAPN8-208ENST00000482183 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
CAPN8-208ENST00000482183 TIMELESSQ9UNS1 1208 aa14.7□□□□□ -0.06
CAPN8-208ENST00000482183 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
CAPN8-208ENST00000482183 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
CAPN8-208ENST00000482183 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
CAPN8-208ENST00000482183 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
CAPN8-208ENST00000482183 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
CAPN8-208ENST00000482183 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
CAPN8-208ENST00000482183 DHX57Q6P158 1386 aaKnown RBP14.65□□□□□ -0.06
CAPN8-208ENST00000482183 NESP48681 1621 aa14.65□□□□□ -0.06
CAPN8-208ENST00000482183 SETD5Q9C0A6 1442 aa14.61□□□□□ -0.07
CAPN8-208ENST00000482183 CCDC18Q5T9S5 1454 aa14.61□□□□□ -0.07
CAPN8-208ENST00000482183 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
CAPN8-208ENST00000482183 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
CAPN8-208ENST00000482183 PCF11O94913 1555 aaKnown RBP14.59□□□□□ -0.07
CAPN8-208ENST00000482183 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
CAPN8-208ENST00000482183 MTUS2Q5JR59 1369 aa14.57□□□□□ -0.08
CAPN8-208ENST00000482183 GRIN2BQ13224 1484 aa14.56□□□□□ -0.08
CAPN8-208ENST00000482183 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
CAPN8-208ENST00000482183 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
CAPN8-208ENST00000482183 FHOD3Q2V2M9 1422 aa14.55□□□□□ -0.08
CAPN8-208ENST00000482183 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
CAPN8-208ENST00000482183 EHBP1L1Q8N3D4 1523 aa14.53□□□□□ -0.08
CAPN8-208ENST00000482183 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.09
CAPN8-208ENST00000482183 RAB3GAP2Q9H2M9 1393 aa14.51□□□□□ -0.09
CAPN8-208ENST00000482183 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
CAPN8-208ENST00000482183 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
CAPN8-208ENST00000482183 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
CAPN8-208ENST00000482183 SUPT6HQ7KZ85 1726 aaKnown RBP14.49□□□□□ -0.09
CAPN8-208ENST00000482183 HECW1Q76N89 1606 aa14.49□□□□□ -0.09
CAPN8-208ENST00000482183 FGD6Q6ZV73 1430 aa14.49□□□□□ -0.09
CAPN8-208ENST00000482183 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
CAPN8-208ENST00000482183 IQGAP2Q13576 1575 aa14.48□□□□□ -0.09
CAPN8-208ENST00000482183 WDR62O43379 1518 aa14.47□□□□□ -0.09
CAPN8-208ENST00000482183 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
CAPN8-208ENST00000482183 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
CAPN8-208ENST00000482183 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
CAPN8-208ENST00000482183 CDK11AQ9UQ88 783 aaPredicted RBP14.46□□□□□ -0.09
CAPN8-208ENST00000482183 MYOM3Q5VTT5 1437 aa14.46□□□□□ -0.09
CAPN8-208ENST00000482183 UGGT2Q9NYU1 1516 aa14.46□□□□□ -0.1
CAPN8-208ENST00000482183 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
CAPN8-208ENST00000482183 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
CAPN8-208ENST00000482183 KIAA0586Q9BVV6 1533 aa14.43□□□□□ -0.1
CAPN8-208ENST00000482183 ITGAEP38570 1179 aa14.43□□□□□ -0.1
CAPN8-208ENST00000482183 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
CAPN8-208ENST00000482183 NCOA2Q15596 1464 aa14.41□□□□□ -0.1
CAPN8-208ENST00000482183 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
CAPN8-208ENST00000482183 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
CAPN8-208ENST00000482183 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
CAPN8-208ENST00000482183 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
CAPN8-208ENST00000482183 MAPKBP1O60336 1514 aa14.35□□□□□ -0.11
CAPN8-208ENST00000482183 EPRSP07814 1512 aaKnown RBP14.35□□□□□ -0.11
CAPN8-208ENST00000482183 CARMIL2Q6F5E8 1435 aa14.34□□□□□ -0.11
CAPN8-208ENST00000482183 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
CAPN8-208ENST00000482183 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
CAPN8-208ENST00000482183 TONSLQ96HA7 1378 aa14.32□□□□□ -0.12
CAPN8-208ENST00000482183 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
CAPN8-208ENST00000482183 SYNJ2O15056 1496 aa14.31□□□□□ -0.12
CAPN8-208ENST00000482183 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
CAPN8-208ENST00000482183 MIER1Q8N108 512 aa14.3□□□□□ -0.12
CAPN8-208ENST00000482183 ROCK1Q13464 1354 aa14.3□□□□□ -0.12
CAPN8-208ENST00000482183 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
CAPN8-208ENST00000482183 NAIPQ13075 1403 aa14.27□□□□□ -0.12
CAPN8-208ENST00000482183 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
CAPN8-208ENST00000482183 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
CAPN8-208ENST00000482183 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
CAPN8-208ENST00000482183 GCC2Q8IWJ2 1684 aa14.24□□□□□ -0.13
CAPN8-208ENST00000482183 RAPGEF6Q8TEU7 1601 aa14.24□□□□□ -0.13
CAPN8-208ENST00000482183 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
CAPN8-208ENST00000482183 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
CAPN8-208ENST00000482183 DISP1Q96F81 1524 aa14.21□□□□□ -0.13
CAPN8-208ENST00000482183 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
CAPN8-208ENST00000482183 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
CAPN8-208ENST00000482183 NUP160Q12769 1436 aa14.2□□□□□ -0.14
CAPN8-208ENST00000482183 TROQ12816 1431 aaPredicted RBP14.2□□□□□ -0.14
CAPN8-208ENST00000482183 CCER2I3L3R5 266 aa14.17□□□□□ -0.14
CAPN8-208ENST00000482183 NUP153P49790 1475 aaKnown RBP14.16□□□□□ -0.14
CAPN8-208ENST00000482183 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
CAPN8-208ENST00000482183 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
CAPN8-208ENST00000482183 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
CAPN8-208ENST00000482183 ADCY10Q96PN6 1610 aa14.15□□□□□ -0.14
CAPN8-208ENST00000482183 DAPK1P53355 1430 aa14.15□□□□□ -0.14
CAPN8-208ENST00000482183 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
CAPN8-208ENST00000482183 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
CAPN8-208ENST00000482183 ANP32CO43423 234 aa14.14□□□□□ -0.15
CAPN8-208ENST00000482183 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
CAPN8-208ENST00000482183 JPH4Q96JJ6 628 aa14.14□□□□□ -0.15
CAPN8-208ENST00000482183 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
CAPN8-208ENST00000482183 SIN3AQ96ST3 1273 aa14.14□□□□□ -0.15
CAPN8-208ENST00000482183 CDK13Q14004 1512 aaKnown RBP14.14□□□□□ -0.15
CAPN8-208ENST00000482183 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
CAPN8-208ENST00000482183 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
CAPN8-208ENST00000482183 MPHOSPH9Q99550 1183 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms