RNA–Protein interactions for RNA: ENST00000481541.1

GGCX-208, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 600 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-208ENST00000481541 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
GGCX-208ENST00000481541 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
GGCX-208ENST00000481541 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
GGCX-208ENST00000481541 FBLN2P98095 1184 aa17.78■□□□□ 0.44
GGCX-208ENST00000481541 WDR62O43379 1518 aa17.76■□□□□ 0.43
GGCX-208ENST00000481541 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
GGCX-208ENST00000481541 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
GGCX-208ENST00000481541 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
GGCX-208ENST00000481541 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
GGCX-208ENST00000481541 SOGA1O94964 1423 aa17.64■□□□□ 0.42
GGCX-208ENST00000481541 EEA1Q15075 1411 aa17.64■□□□□ 0.41
GGCX-208ENST00000481541 POTEHQ6S545 545 aa17.63■□□□□ 0.41
GGCX-208ENST00000481541 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
GGCX-208ENST00000481541 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
GGCX-208ENST00000481541 MKRN4PQ13434 485 aaPredicted RBP17.61■□□□□ 0.41
GGCX-208ENST00000481541 CUX2O14529 1486 aa17.6■□□□□ 0.41
GGCX-208ENST00000481541 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
GGCX-208ENST00000481541 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
GGCX-208ENST00000481541 KIF27Q86VH2 1401 aa17.58■□□□□ 0.41
GGCX-208ENST00000481541 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
GGCX-208ENST00000481541 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
GGCX-208ENST00000481541 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
GGCX-208ENST00000481541 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
GGCX-208ENST00000481541 SPDYE2Q495Y8 402 aa17.54■□□□□ 0.4
GGCX-208ENST00000481541 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
GGCX-208ENST00000481541 CHRDL2Q6WN34 429 aa17.51■□□□□ 0.39
GGCX-208ENST00000481541 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
GGCX-208ENST00000481541 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
GGCX-208ENST00000481541 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
GGCX-208ENST00000481541 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
GGCX-208ENST00000481541 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
GGCX-208ENST00000481541 IGF1RP08069 1367 aa17.43■□□□□ 0.38
GGCX-208ENST00000481541 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
GGCX-208ENST00000481541 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
GGCX-208ENST00000481541 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
GGCX-208ENST00000481541 KIF21BO75037 1637 aa17.39■□□□□ 0.38
GGCX-208ENST00000481541 GRIN2BQ13224 1484 aa17.38■□□□□ 0.37
GGCX-208ENST00000481541 PRXQ9BXM0 1461 aa17.38■□□□□ 0.37
GGCX-208ENST00000481541 ZNF692Q9BU19 519 aaPredicted RBP17.38■□□□□ 0.37
GGCX-208ENST00000481541 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
GGCX-208ENST00000481541 CUL7Q14999 1698 aa17.36■□□□□ 0.37
GGCX-208ENST00000481541 GOLGA3Q08378 1498 aa17.34■□□□□ 0.37
GGCX-208ENST00000481541 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
GGCX-208ENST00000481541 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
GGCX-208ENST00000481541 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
GGCX-208ENST00000481541 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
GGCX-208ENST00000481541 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
GGCX-208ENST00000481541 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
GGCX-208ENST00000481541 MAGI1Q96QZ7 1491 aaPredicted RBP17.28■□□□□ 0.36
GGCX-208ENST00000481541 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
GGCX-208ENST00000481541 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
GGCX-208ENST00000481541 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
GGCX-208ENST00000481541 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
GGCX-208ENST00000481541 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
GGCX-208ENST00000481541 SPDYE1Q8NFV5 336 aaPredicted RBP17.17■□□□□ 0.34
GGCX-208ENST00000481541 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
GGCX-208ENST00000481541 PIP4P2Q8N4L2 257 aa17.15■□□□□ 0.34
GGCX-208ENST00000481541 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
GGCX-208ENST00000481541 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
GGCX-208ENST00000481541 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
GGCX-208ENST00000481541 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
GGCX-208ENST00000481541 CEP162Q5TB80 1403 aa17.09■□□□□ 0.33
GGCX-208ENST00000481541 NUP160Q12769 1436 aa17.06■□□□□ 0.32
GGCX-208ENST00000481541 CHD1O14646 1710 aa17.06■□□□□ 0.32
GGCX-208ENST00000481541 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
GGCX-208ENST00000481541 CLIP1P30622 1438 aa17.04■□□□□ 0.32
GGCX-208ENST00000481541 KIAA0586Q9BVV6 1533 aa17.03■□□□□ 0.32
GGCX-208ENST00000481541 IQGAP2Q13576 1575 aa17.02■□□□□ 0.31
GGCX-208ENST00000481541 EFCAB5A4FU69 1503 aa16.97■□□□□ 0.31
GGCX-208ENST00000481541 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
GGCX-208ENST00000481541 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
GGCX-208ENST00000481541 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
GGCX-208ENST00000481541 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
GGCX-208ENST00000481541 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
GGCX-208ENST00000481541 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
GGCX-208ENST00000481541 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
GGCX-208ENST00000481541 PRR29P0C7W0 189 aa16.88■□□□□ 0.29
GGCX-208ENST00000481541 PRKAR2AP13861 404 aaKnown RBP16.88■□□□□ 0.29
GGCX-208ENST00000481541 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
GGCX-208ENST00000481541 SHROOM2Q13796 1616 aa16.86■□□□□ 0.29
GGCX-208ENST00000481541 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
GGCX-208ENST00000481541 DISP1Q96F81 1524 aa16.86■□□□□ 0.29
GGCX-208ENST00000481541 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
GGCX-208ENST00000481541 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
GGCX-208ENST00000481541 CARMIL2Q6F5E8 1435 aa16.84■□□□□ 0.29
GGCX-208ENST00000481541 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
GGCX-208ENST00000481541 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
GGCX-208ENST00000481541 PRG4Q92954 1404 aaPredicted RBP16.8■□□□□ 0.28
GGCX-208ENST00000481541 HAX1O00165 279 aa16.79■□□□□ 0.28
GGCX-208ENST00000481541 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
GGCX-208ENST00000481541 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
GGCX-208ENST00000481541 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
GGCX-208ENST00000481541 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
GGCX-208ENST00000481541 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
GGCX-208ENST00000481541 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
GGCX-208ENST00000481541 PTPRGP23470 1445 aa16.68■□□□□ 0.26
GGCX-208ENST00000481541 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
GGCX-208ENST00000481541 HECW1Q76N89 1606 aa16.65■□□□□ 0.26
GGCX-208ENST00000481541 RAPGEF6Q8TEU7 1601 aa16.65■□□□□ 0.26
GGCX-208ENST00000481541 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms