RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
EFEMP1-211ENST00000480016 TSPOAP1O95153 1857 aa16.06■□□□□ 0.16
EFEMP1-211ENST00000480016 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
EFEMP1-211ENST00000480016 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
EFEMP1-211ENST00000480016 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
EFEMP1-211ENST00000480016 KCNA4P22459 653 aa16.01■□□□□ 0.15
EFEMP1-211ENST00000480016 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
EFEMP1-211ENST00000480016 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
EFEMP1-211ENST00000480016 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
EFEMP1-211ENST00000480016 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
EFEMP1-211ENST00000480016 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
EFEMP1-211ENST00000480016 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
EFEMP1-211ENST00000480016 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
EFEMP1-211ENST00000480016 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
EFEMP1-211ENST00000480016 PCF11O94913 1555 aaKnown RBP15.86■□□□□ 0.13
EFEMP1-211ENST00000480016 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
EFEMP1-211ENST00000480016 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
EFEMP1-211ENST00000480016 HSPA2P54652 639 aa15.8■□□□□ 0.12
EFEMP1-211ENST00000480016 PTPRMP28827 1452 aa15.78■□□□□ 0.12
EFEMP1-211ENST00000480016 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
EFEMP1-211ENST00000480016 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
EFEMP1-211ENST00000480016 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
EFEMP1-211ENST00000480016 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
EFEMP1-211ENST00000480016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
EFEMP1-211ENST00000480016 C1QBPQ07021 282 aaKnown RBP15.72■□□□□ 0.11
EFEMP1-211ENST00000480016 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
EFEMP1-211ENST00000480016 SOGA1O94964 1423 aa15.68■□□□□ 0.1
EFEMP1-211ENST00000480016 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
EFEMP1-211ENST00000480016 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
EFEMP1-211ENST00000480016 WDR97A6NE52 1622 aa15.64■□□□□ 0.09
EFEMP1-211ENST00000480016 ADCY10Q96PN6 1610 aa15.63■□□□□ 0.09
EFEMP1-211ENST00000480016 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
EFEMP1-211ENST00000480016 WIZO95785 1651 aa15.62■□□□□ 0.09
EFEMP1-211ENST00000480016 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
EFEMP1-211ENST00000480016 ADAMTSL3P82987 1691 aa15.58■□□□□ 0.08
EFEMP1-211ENST00000480016 NUP160Q12769 1436 aa15.58■□□□□ 0.08
EFEMP1-211ENST00000480016 GLI2P10070 1586 aa15.55■□□□□ 0.08
EFEMP1-211ENST00000480016 KIF21BO75037 1637 aa15.54■□□□□ 0.08
EFEMP1-211ENST00000480016 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
EFEMP1-211ENST00000480016 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
EFEMP1-211ENST00000480016 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.06
EFEMP1-211ENST00000480016 TEX14Q8IWB6 1497 aa15.44■□□□□ 0.06
EFEMP1-211ENST00000480016 IFFO2Q5TF58 517 aa15.43■□□□□ 0.06
EFEMP1-211ENST00000480016 PBRM1Q86U86 1689 aa15.42■□□□□ 0.06
EFEMP1-211ENST00000480016 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
EFEMP1-211ENST00000480016 LTBP4Q8N2S1 1624 aa15.41■□□□□ 0.06
EFEMP1-211ENST00000480016 ASXL2Q76L83 1435 aa15.4■□□□□ 0.06
EFEMP1-211ENST00000480016 SRCAPQ6ZRS2 3230 aa15.39■□□□□ 0.06
EFEMP1-211ENST00000480016 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
EFEMP1-211ENST00000480016 UBAP1LF5GYI3 381 aa15.38■□□□□ 0.05
EFEMP1-211ENST00000480016 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
EFEMP1-211ENST00000480016 HSPA1LP34931 641 aa15.38■□□□□ 0.05
EFEMP1-211ENST00000480016 MAP3K4Q9Y6R4 1608 aa15.38■□□□□ 0.05
EFEMP1-211ENST00000480016 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
EFEMP1-211ENST00000480016 MADDQ8WXG6 1647 aa15.37■□□□□ 0.05
EFEMP1-211ENST00000480016 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
EFEMP1-211ENST00000480016 RGS17Q9UGC6 210 aaPredicted RBP15.35■□□□□ 0.05
EFEMP1-211ENST00000480016 STRCQ7RTU9 1775 aa15.34■□□□□ 0.05
EFEMP1-211ENST00000480016 PTPRTO14522 1441 aa15.3■□□□□ 0.04
EFEMP1-211ENST00000480016 BCORL1Q5H9F3 1711 aa15.3■□□□□ 0.04
EFEMP1-211ENST00000480016 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
EFEMP1-211ENST00000480016 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.04
EFEMP1-211ENST00000480016 RIMS1Q86UR5 1692 aaKnown RBP15.24■□□□□ 0.03
EFEMP1-211ENST00000480016 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
EFEMP1-211ENST00000480016 ABCC2Q92887 1545 aa15.23■□□□□ 0.03
EFEMP1-211ENST00000480016 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
EFEMP1-211ENST00000480016 ARID4BQ4LE39 1312 aaPredicted RBP15.19■□□□□ 0.02
EFEMP1-211ENST00000480016 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
EFEMP1-211ENST00000480016 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
EFEMP1-211ENST00000480016 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
EFEMP1-211ENST00000480016 POTEAQ6S8J7 498 aa15.14■□□□□ 0.01
EFEMP1-211ENST00000480016 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
EFEMP1-211ENST00000480016 UPF1Q92900 1129 aaKnown RBP eCLIP15.12■□□□□ 0.01
EFEMP1-211ENST00000480016 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
EFEMP1-211ENST00000480016 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
EFEMP1-211ENST00000480016 CAPN15O75808 1086 aa15.1■□□□□ 0.01
EFEMP1-211ENST00000480016 CUL7Q14999 1698 aa15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 PTPRGP23470 1445 aa15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 ABCA10Q8WWZ4 1543 aa15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
EFEMP1-211ENST00000480016 CUX1P39880 1505 aa15.07■□□□□ 0
EFEMP1-211ENST00000480016 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
EFEMP1-211ENST00000480016 APLP2Q06481 763 aa15.06■□□□□ 0
EFEMP1-211ENST00000480016 CD109Q6YHK3 1445 aa15.06■□□□□ 0
EFEMP1-211ENST00000480016 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
EFEMP1-211ENST00000480016 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
EFEMP1-211ENST00000480016 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
EFEMP1-211ENST00000480016 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
EFEMP1-211ENST00000480016 SETD1AO15047 1707 aaKnown RBP15.02□□□□□ -0.01
EFEMP1-211ENST00000480016 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
EFEMP1-211ENST00000480016 RAPGEF3O95398 923 aa14.99□□□□□ -0.01
EFEMP1-211ENST00000480016 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
EFEMP1-211ENST00000480016 DSG3P32926 999 aa14.97□□□□□ -0.01
EFEMP1-211ENST00000480016 TOM1O60784 492 aa14.96□□□□□ -0.01
EFEMP1-211ENST00000480016 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
EFEMP1-211ENST00000480016 KDM5BQ9UGL1 1544 aa14.96□□□□□ -0.02
EFEMP1-211ENST00000480016 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms