RNA–Protein interactions for RNA: ENST00000480015.1

ZIC4-211, Transcript of Zic family member 4, humanhuman

TSL 4

Gene ZIC4, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-211ENST00000480015 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
ZIC4-211ENST00000480015 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
ZIC4-211ENST00000480015 CHD1O14646 1710 aa13.59□□□□□ -0.23
ZIC4-211ENST00000480015 GOLGA3Q08378 1498 aa13.57□□□□□ -0.24
ZIC4-211ENST00000480015 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
ZIC4-211ENST00000480015 NUP160Q12769 1436 aa13.55□□□□□ -0.24
ZIC4-211ENST00000480015 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
ZIC4-211ENST00000480015 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
ZIC4-211ENST00000480015 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
ZIC4-211ENST00000480015 FBLN2P98095 1184 aa13.52□□□□□ -0.25
ZIC4-211ENST00000480015 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
ZIC4-211ENST00000480015 CEP170Q5SW79 1584 aa13.48□□□□□ -0.25
ZIC4-211ENST00000480015 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
ZIC4-211ENST00000480015 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
ZIC4-211ENST00000480015 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
ZIC4-211ENST00000480015 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
ZIC4-211ENST00000480015 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
ZIC4-211ENST00000480015 KCNA4P22459 653 aa13.44□□□□□ -0.26
ZIC4-211ENST00000480015 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
ZIC4-211ENST00000480015 EFCAB5A4FU69 1503 aa13.4□□□□□ -0.26
ZIC4-211ENST00000480015 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
ZIC4-211ENST00000480015 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
ZIC4-211ENST00000480015 JPH4Q96JJ6 628 aa13.38□□□□□ -0.27
ZIC4-211ENST00000480015 SAMD9Q5K651 1589 aa13.35□□□□□ -0.27
ZIC4-211ENST00000480015 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
ZIC4-211ENST00000480015 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
ZIC4-211ENST00000480015 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
ZIC4-211ENST00000480015 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
ZIC4-211ENST00000480015 CLIP1P30622 1438 aa13.3□□□□□ -0.28
ZIC4-211ENST00000480015 DISP1Q96F81 1524 aa13.29□□□□□ -0.28
ZIC4-211ENST00000480015 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
ZIC4-211ENST00000480015 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
ZIC4-211ENST00000480015 FMN1Q68DA7 1419 aa13.27□□□□□ -0.29
ZIC4-211ENST00000480015 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
ZIC4-211ENST00000480015 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
ZIC4-211ENST00000480015 DNAJC5Q9H3Z4 198 aa13.24□□□□□ -0.29
ZIC4-211ENST00000480015 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
ZIC4-211ENST00000480015 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
ZIC4-211ENST00000480015 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
ZIC4-211ENST00000480015 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
ZIC4-211ENST00000480015 PTPRGP23470 1445 aa13.22□□□□□ -0.29
ZIC4-211ENST00000480015 UHRF1BP1LA0JNW5 1464 aa13.18□□□□□ -0.3
ZIC4-211ENST00000480015 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
ZIC4-211ENST00000480015 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
ZIC4-211ENST00000480015 FHOD3Q2V2M9 1422 aa13.16□□□□□ -0.3
ZIC4-211ENST00000480015 VPS8Q8N3P4 1428 aa13.16□□□□□ -0.3
ZIC4-211ENST00000480015 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
ZIC4-211ENST00000480015 RAPGEF6Q8TEU7 1601 aa13.16□□□□□ -0.3
ZIC4-211ENST00000480015 ABCA8O94911 1581 aa13.15□□□□□ -0.3
ZIC4-211ENST00000480015 HECW1Q76N89 1606 aa13.15□□□□□ -0.3
ZIC4-211ENST00000480015 FYCO1Q9BQS8 1478 aa13.15□□□□□ -0.3
ZIC4-211ENST00000480015 CASKIN1Q8WXD9 1431 aa13.14□□□□□ -0.31
ZIC4-211ENST00000480015 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
ZIC4-211ENST00000480015 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
ZIC4-211ENST00000480015 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
ZIC4-211ENST00000480015 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
ZIC4-211ENST00000480015 P3H3Q8IVL6 736 aa13.12□□□□□ -0.31
ZIC4-211ENST00000480015 CCDC18Q5T9S5 1454 aa13.11□□□□□ -0.31
ZIC4-211ENST00000480015 MAP3K1Q13233 1512 aa13.11□□□□□ -0.31
ZIC4-211ENST00000480015 KDM5BQ9UGL1 1544 aa13.08□□□□□ -0.31
ZIC4-211ENST00000480015 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
ZIC4-211ENST00000480015 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
ZIC4-211ENST00000480015 PLB1Q6P1J6 1458 aa13.08□□□□□ -0.32
ZIC4-211ENST00000480015 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
ZIC4-211ENST00000480015 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
ZIC4-211ENST00000480015 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
ZIC4-211ENST00000480015 NUP153P49790 1475 aaKnown RBP13.05□□□□□ -0.32
ZIC4-211ENST00000480015 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
ZIC4-211ENST00000480015 APLP2Q06481 763 aa13.05□□□□□ -0.32
ZIC4-211ENST00000480015 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
ZIC4-211ENST00000480015 ZCCHC11Q5TAX3 1644 aaKnown RBP13.02□□□□□ -0.32
ZIC4-211ENST00000480015 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
ZIC4-211ENST00000480015 ATP10BO94823 1461 aa13.01□□□□□ -0.33
ZIC4-211ENST00000480015 TIAM1Q13009 1591 aa13□□□□□ -0.33
ZIC4-211ENST00000480015 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
ZIC4-211ENST00000480015 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
ZIC4-211ENST00000480015 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
ZIC4-211ENST00000480015 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
ZIC4-211ENST00000480015 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
ZIC4-211ENST00000480015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
ZIC4-211ENST00000480015 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
ZIC4-211ENST00000480015 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
ZIC4-211ENST00000480015 WDR7Q9Y4E6 1490 aa12.95□□□□□ -0.34
ZIC4-211ENST00000480015 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
ZIC4-211ENST00000480015 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
ZIC4-211ENST00000480015 CDK13Q14004 1512 aaKnown RBP12.93□□□□□ -0.34
ZIC4-211ENST00000480015 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
ZIC4-211ENST00000480015 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
ZIC4-211ENST00000480015 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
ZIC4-211ENST00000480015 KIF14Q15058 1648 aa12.91□□□□□ -0.34
ZIC4-211ENST00000480015 GLI2P10070 1586 aa12.91□□□□□ -0.34
ZIC4-211ENST00000480015 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
ZIC4-211ENST00000480015 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
ZIC4-211ENST00000480015 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
ZIC4-211ENST00000480015 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
ZIC4-211ENST00000480015 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
ZIC4-211ENST00000480015 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
ZIC4-211ENST00000480015 DIP2BQ9P265 1576 aa12.86□□□□□ -0.35
ZIC4-211ENST00000480015 MAGI3Q5TCQ9 1506 aa12.85□□□□□ -0.35
ZIC4-211ENST00000480015 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms