RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
PDZRN3-208ENST00000479530 PRDM2Q13029 1718 aa19.3■□□□□ 0.68
PDZRN3-208ENST00000479530 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
PDZRN3-208ENST00000479530 TSHZ2Q9NRE2 1034 aa19.25■□□□□ 0.67
PDZRN3-208ENST00000479530 PHLDB1Q86UU1 1377 aa19.24■□□□□ 0.67
PDZRN3-208ENST00000479530 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
PDZRN3-208ENST00000479530 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
PDZRN3-208ENST00000479530 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
PDZRN3-208ENST00000479530 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
PDZRN3-208ENST00000479530 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
PDZRN3-208ENST00000479530 TIAM1Q13009 1591 aa19.2■□□□□ 0.66
PDZRN3-208ENST00000479530 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
PDZRN3-208ENST00000479530 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
PDZRN3-208ENST00000479530 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
PDZRN3-208ENST00000479530 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
PDZRN3-208ENST00000479530 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
PDZRN3-208ENST00000479530 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-208ENST00000479530 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-208ENST00000479530 BCANQ96GW7 911 aa19.1■□□□□ 0.65
PDZRN3-208ENST00000479530 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
PDZRN3-208ENST00000479530 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
PDZRN3-208ENST00000479530 MAPKBP1O60336 1514 aa19.08■□□□□ 0.64
PDZRN3-208ENST00000479530 SETD5Q9C0A6 1442 aa19.07■□□□□ 0.64
PDZRN3-208ENST00000479530 ANP32EQ9BTT0 268 aa19.05■□□□□ 0.64
PDZRN3-208ENST00000479530 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
PDZRN3-208ENST00000479530 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
PDZRN3-208ENST00000479530 FKBP8Q14318 412 aa18.99■□□□□ 0.63
PDZRN3-208ENST00000479530 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
PDZRN3-208ENST00000479530 CFAP43Q8NDM7 1665 aa18.96■□□□□ 0.63
PDZRN3-208ENST00000479530 HIRIP3Q9BW71 556 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-208ENST00000479530 GAPVD1Q14C86 1478 aa18.96■□□□□ 0.63
PDZRN3-208ENST00000479530 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
PDZRN3-208ENST00000479530 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
PDZRN3-208ENST00000479530 EFCAB5A4FU69 1503 aa18.93■□□□□ 0.62
PDZRN3-208ENST00000479530 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
PDZRN3-208ENST00000479530 CUL7Q14999 1698 aa18.92■□□□□ 0.62
PDZRN3-208ENST00000479530 PTPRKQ15262 1439 aa18.92■□□□□ 0.62
PDZRN3-208ENST00000479530 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
PDZRN3-208ENST00000479530 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
PDZRN3-208ENST00000479530 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
PDZRN3-208ENST00000479530 FMN1Q68DA7 1419 aa18.9■□□□□ 0.62
PDZRN3-208ENST00000479530 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.62
PDZRN3-208ENST00000479530 ARID3CA6NKF2 412 aa18.89■□□□□ 0.62
PDZRN3-208ENST00000479530 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
PDZRN3-208ENST00000479530 CTTNBP2Q8WZ74 1663 aa18.88■□□□□ 0.61
PDZRN3-208ENST00000479530 ABCA5Q8WWZ7 1642 aa18.88■□□□□ 0.61
PDZRN3-208ENST00000479530 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
PDZRN3-208ENST00000479530 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
PDZRN3-208ENST00000479530 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.6
PDZRN3-208ENST00000479530 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
PDZRN3-208ENST00000479530 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
PDZRN3-208ENST00000479530 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
PDZRN3-208ENST00000479530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDZRN3-208ENST00000479530 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
PDZRN3-208ENST00000479530 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
PDZRN3-208ENST00000479530 SAMD9Q5K651 1589 aa18.8■□□□□ 0.6
PDZRN3-208ENST00000479530 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
PDZRN3-208ENST00000479530 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
PDZRN3-208ENST00000479530 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
PDZRN3-208ENST00000479530 NEFLP07196 543 aa18.76■□□□□ 0.59
PDZRN3-208ENST00000479530 MYOM3Q5VTT5 1437 aa18.75■□□□□ 0.59
PDZRN3-208ENST00000479530 CCDC18Q5T9S5 1454 aa18.75■□□□□ 0.59
PDZRN3-208ENST00000479530 NAIPQ13075 1403 aa18.73■□□□□ 0.59
PDZRN3-208ENST00000479530 HFM1A2PYH4 1435 aa18.73■□□□□ 0.59
PDZRN3-208ENST00000479530 ANP32CO43423 234 aa18.72■□□□□ 0.59
PDZRN3-208ENST00000479530 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
PDZRN3-208ENST00000479530 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
PDZRN3-208ENST00000479530 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
PDZRN3-208ENST00000479530 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
PDZRN3-208ENST00000479530 UACAQ9BZF9 1416 aa18.68■□□□□ 0.58
PDZRN3-208ENST00000479530 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
PDZRN3-208ENST00000479530 CDK13Q14004 1512 aaKnown RBP18.67■□□□□ 0.58
PDZRN3-208ENST00000479530 MSH5O43196 834 aa18.66■□□□□ 0.58
PDZRN3-208ENST00000479530 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
PDZRN3-208ENST00000479530 FOXD1Q16676 465 aa18.64■□□□□ 0.57
PDZRN3-208ENST00000479530 EHBP1L1Q8N3D4 1523 aa18.63■□□□□ 0.57
PDZRN3-208ENST00000479530 SUPT6HQ7KZ85 1726 aaKnown RBP18.62■□□□□ 0.57
PDZRN3-208ENST00000479530 ARHGEF11O15085 1522 aa18.62■□□□□ 0.57
PDZRN3-208ENST00000479530 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
PDZRN3-208ENST00000479530 PRKCSHP14314 528 aaPredicted RBP18.62■□□□□ 0.57
PDZRN3-208ENST00000479530 IRX6P78412 446 aaPredicted RBP18.62■□□□□ 0.57
PDZRN3-208ENST00000479530 MRC2Q9UBG0 1479 aa18.61■□□□□ 0.57
PDZRN3-208ENST00000479530 ZNF644Q9H582 1327 aaPredicted RBP18.61■□□□□ 0.57
PDZRN3-208ENST00000479530 IQGAP2Q13576 1575 aa18.61■□□□□ 0.57
PDZRN3-208ENST00000479530 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
PDZRN3-208ENST00000479530 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
PDZRN3-208ENST00000479530 DENND4BO75064 1496 aaPredicted RBP18.59■□□□□ 0.57
PDZRN3-208ENST00000479530 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
PDZRN3-208ENST00000479530 KDM6BO15054 1643 aa18.58■□□□□ 0.57
PDZRN3-208ENST00000479530 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
PDZRN3-208ENST00000479530 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDZRN3-208ENST00000479530 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
PDZRN3-208ENST00000479530 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
PDZRN3-208ENST00000479530 WDR62O43379 1518 aa18.53■□□□□ 0.56
PDZRN3-208ENST00000479530 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
PDZRN3-208ENST00000479530 DISP1Q96F81 1524 aa18.51■□□□□ 0.55
PDZRN3-208ENST00000479530 FBLN2P98095 1184 aa18.51■□□□□ 0.55
PDZRN3-208ENST00000479530 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
PDZRN3-208ENST00000479530 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
PDZRN3-208ENST00000479530 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms