RNA–Protein interactions for RNA: ENST00000478484.5

GPN1-207, Transcript of GPN-loop GTPase 1, humanhuman

TSL 3

Gene GPN1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-207ENST00000478484 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
GPN1-207ENST00000478484 POTEHQ6S545 545 aa12.48□□□□□ -0.41
GPN1-207ENST00000478484 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
GPN1-207ENST00000478484 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
GPN1-207ENST00000478484 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
GPN1-207ENST00000478484 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
GPN1-207ENST00000478484 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
GPN1-207ENST00000478484 MRC2Q9UBG0 1479 aa12.35□□□□□ -0.43
GPN1-207ENST00000478484 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
GPN1-207ENST00000478484 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
GPN1-207ENST00000478484 FXR2P51116 673 aaKnown RBP eCLIP12.31□□□□□ -0.44
GPN1-207ENST00000478484 FKBP8Q14318 412 aa12.31□□□□□ -0.44
GPN1-207ENST00000478484 URB2Q14146 1524 aaKnown RBP12.31□□□□□ -0.44
GPN1-207ENST00000478484 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
GPN1-207ENST00000478484 WDR62O43379 1518 aa12.27□□□□□ -0.44
GPN1-207ENST00000478484 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
GPN1-207ENST00000478484 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
GPN1-207ENST00000478484 CUX2O14529 1486 aa12.26□□□□□ -0.45
GPN1-207ENST00000478484 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
GPN1-207ENST00000478484 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
GPN1-207ENST00000478484 CUX1P39880 1505 aa12.23□□□□□ -0.45
GPN1-207ENST00000478484 PRKAR2AP13861 404 aaKnown RBP12.23□□□□□ -0.45
GPN1-207ENST00000478484 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
GPN1-207ENST00000478484 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
GPN1-207ENST00000478484 PROM2Q8N271 834 aa12.19□□□□□ -0.46
GPN1-207ENST00000478484 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
GPN1-207ENST00000478484 FGD5Q6ZNL6 1462 aa12.17□□□□□ -0.46
GPN1-207ENST00000478484 SOGA1O94964 1423 aa12.16□□□□□ -0.46
GPN1-207ENST00000478484 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
GPN1-207ENST00000478484 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
GPN1-207ENST00000478484 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
GPN1-207ENST00000478484 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.47
GPN1-207ENST00000478484 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
GPN1-207ENST00000478484 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
GPN1-207ENST00000478484 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
GPN1-207ENST00000478484 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
GPN1-207ENST00000478484 ZNF608Q9ULD9 1512 aaPredicted RBP12.09□□□□□ -0.47
GPN1-207ENST00000478484 HAX1O00165 279 aa12.08□□□□□ -0.48
GPN1-207ENST00000478484 AQRO60306 1485 aaKnown RBP eCLIP12.08□□□□□ -0.48
GPN1-207ENST00000478484 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
GPN1-207ENST00000478484 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
GPN1-207ENST00000478484 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.49
GPN1-207ENST00000478484 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
GPN1-207ENST00000478484 FARP1Q9Y4F1 1045 aaPredicted RBP12.01□□□□□ -0.49
GPN1-207ENST00000478484 GAPVD1Q14C86 1478 aa12.01□□□□□ -0.49
GPN1-207ENST00000478484 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
GPN1-207ENST00000478484 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
GPN1-207ENST00000478484 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
GPN1-207ENST00000478484 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
GPN1-207ENST00000478484 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
GPN1-207ENST00000478484 MIER1Q8N108 512 aa11.95□□□□□ -0.5
GPN1-207ENST00000478484 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
GPN1-207ENST00000478484 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
GPN1-207ENST00000478484 SNAPC4Q5SXM2 1469 aa11.93□□□□□ -0.5
GPN1-207ENST00000478484 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
GPN1-207ENST00000478484 EVX2Q03828 476 aa11.91□□□□□ -0.5
GPN1-207ENST00000478484 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
GPN1-207ENST00000478484 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
GPN1-207ENST00000478484 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
GPN1-207ENST00000478484 IGF1RP08069 1367 aa11.9□□□□□ -0.5
GPN1-207ENST00000478484 MAGI1Q96QZ7 1491 aaPredicted RBP11.89□□□□□ -0.51
GPN1-207ENST00000478484 CHD1O14646 1710 aa11.89□□□□□ -0.51
GPN1-207ENST00000478484 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
GPN1-207ENST00000478484 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
GPN1-207ENST00000478484 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
GPN1-207ENST00000478484 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPN1-207ENST00000478484 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
GPN1-207ENST00000478484 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
GPN1-207ENST00000478484 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
GPN1-207ENST00000478484 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
GPN1-207ENST00000478484 CARMIL1Q5VZK9 1371 aa11.84□□□□□ -0.51
GPN1-207ENST00000478484 CUL7Q14999 1698 aa11.82□□□□□ -0.52
GPN1-207ENST00000478484 EEA1Q15075 1411 aa11.81□□□□□ -0.52
GPN1-207ENST00000478484 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
GPN1-207ENST00000478484 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
GPN1-207ENST00000478484 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
GPN1-207ENST00000478484 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
GPN1-207ENST00000478484 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
GPN1-207ENST00000478484 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
GPN1-207ENST00000478484 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
GPN1-207ENST00000478484 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
GPN1-207ENST00000478484 PRXQ9BXM0 1461 aa11.73□□□□□ -0.53
GPN1-207ENST00000478484 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
GPN1-207ENST00000478484 NUP160Q12769 1436 aa11.71□□□□□ -0.53
GPN1-207ENST00000478484 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
GPN1-207ENST00000478484 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
GPN1-207ENST00000478484 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
GPN1-207ENST00000478484 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
GPN1-207ENST00000478484 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
GPN1-207ENST00000478484 KIAA0586Q9BVV6 1533 aa11.68□□□□□ -0.54
GPN1-207ENST00000478484 KIF21BO75037 1637 aa11.67□□□□□ -0.54
GPN1-207ENST00000478484 GABBR2O75899 941 aa11.66□□□□□ -0.54
GPN1-207ENST00000478484 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.54
GPN1-207ENST00000478484 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
GPN1-207ENST00000478484 LOC105371045A0A1W2PR82 267 aa11.65□□□□□ -0.54
GPN1-207ENST00000478484 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
GPN1-207ENST00000478484 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
GPN1-207ENST00000478484 GOLGA3Q08378 1498 aa11.64□□□□□ -0.55
GPN1-207ENST00000478484 PRG4Q92954 1404 aaPredicted RBP11.64□□□□□ -0.55
GPN1-207ENST00000478484 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms