RNA–Protein interactions for RNA: ENST00000478484.5

GPN1-207, Transcript of GPN-loop GTPase 1, humanhuman

TSL 3

Gene GPN1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-207ENST00000478484 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
GPN1-207ENST00000478484 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
GPN1-207ENST00000478484 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
GPN1-207ENST00000478484 PHF23Q9BUL5 403 aaPredicted RBP19.45■□□□□ 0.7
GPN1-207ENST00000478484 FOXD1Q16676 465 aa18.16■□□□□ 0.5
GPN1-207ENST00000478484 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
GPN1-207ENST00000478484 ADRA2BP18089 450 aa17.27■□□□□ 0.36
GPN1-207ENST00000478484 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
GPN1-207ENST00000478484 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
GPN1-207ENST00000478484 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
GPN1-207ENST00000478484 MSH5O43196 834 aa16.84■□□□□ 0.29
GPN1-207ENST00000478484 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
GPN1-207ENST00000478484 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
GPN1-207ENST00000478484 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
GPN1-207ENST00000478484 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
GPN1-207ENST00000478484 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
GPN1-207ENST00000478484 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
GPN1-207ENST00000478484 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
GPN1-207ENST00000478484 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
GPN1-207ENST00000478484 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
GPN1-207ENST00000478484 KCNA4P22459 653 aa15.07■□□□□ 0
GPN1-207ENST00000478484 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
GPN1-207ENST00000478484 DCAF8L1A6NGE4 600 aa15□□□□□ -0.01
GPN1-207ENST00000478484 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
GPN1-207ENST00000478484 ABCC9O60706 1549 aa14.56□□□□□ -0.08
GPN1-207ENST00000478484 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
GPN1-207ENST00000478484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
GPN1-207ENST00000478484 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
GPN1-207ENST00000478484 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
GPN1-207ENST00000478484 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
GPN1-207ENST00000478484 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
GPN1-207ENST00000478484 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
GPN1-207ENST00000478484 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
GPN1-207ENST00000478484 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
GPN1-207ENST00000478484 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
GPN1-207ENST00000478484 RB1CC1Q8TDY2 1594 aa14.01□□□□□ -0.17
GPN1-207ENST00000478484 NACADO15069 1562 aa14□□□□□ -0.17
GPN1-207ENST00000478484 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
GPN1-207ENST00000478484 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
GPN1-207ENST00000478484 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
GPN1-207ENST00000478484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
GPN1-207ENST00000478484 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
GPN1-207ENST00000478484 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
GPN1-207ENST00000478484 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
GPN1-207ENST00000478484 CAPN15O75808 1086 aa13.86□□□□□ -0.19
GPN1-207ENST00000478484 ZBTB22O15209 634 aa13.85□□□□□ -0.19
GPN1-207ENST00000478484 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
GPN1-207ENST00000478484 APLP2Q06481 763 aa13.8□□□□□ -0.2
GPN1-207ENST00000478484 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
GPN1-207ENST00000478484 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
GPN1-207ENST00000478484 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
GPN1-207ENST00000478484 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
GPN1-207ENST00000478484 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
GPN1-207ENST00000478484 ZNF219Q9P2Y4 722 aaPredicted RBP13.66□□□□□ -0.22
GPN1-207ENST00000478484 DSG3P32926 999 aa13.62□□□□□ -0.23
GPN1-207ENST00000478484 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
GPN1-207ENST00000478484 ABCB7O75027 752 aa13.57□□□□□ -0.24
GPN1-207ENST00000478484 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
GPN1-207ENST00000478484 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
GPN1-207ENST00000478484 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
GPN1-207ENST00000478484 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
GPN1-207ENST00000478484 POLA2Q14181 598 aa13.42□□□□□ -0.26
GPN1-207ENST00000478484 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
GPN1-207ENST00000478484 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
GPN1-207ENST00000478484 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
GPN1-207ENST00000478484 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
GPN1-207ENST00000478484 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
GPN1-207ENST00000478484 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
GPN1-207ENST00000478484 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
GPN1-207ENST00000478484 FBLN2P98095 1184 aa13.01□□□□□ -0.33
GPN1-207ENST00000478484 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
GPN1-207ENST00000478484 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
GPN1-207ENST00000478484 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
GPN1-207ENST00000478484 SMARCA2P51531 1590 aa12.96□□□□□ -0.33
GPN1-207ENST00000478484 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.34
GPN1-207ENST00000478484 WIZO95785 1651 aa12.95□□□□□ -0.34
GPN1-207ENST00000478484 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
GPN1-207ENST00000478484 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
GPN1-207ENST00000478484 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
GPN1-207ENST00000478484 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
GPN1-207ENST00000478484 PEG3Q9GZU2 1588 aa12.89□□□□□ -0.35
GPN1-207ENST00000478484 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
GPN1-207ENST00000478484 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
GPN1-207ENST00000478484 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
GPN1-207ENST00000478484 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
GPN1-207ENST00000478484 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
GPN1-207ENST00000478484 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
GPN1-207ENST00000478484 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
GPN1-207ENST00000478484 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
GPN1-207ENST00000478484 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
GPN1-207ENST00000478484 NESP48681 1621 aa12.63□□□□□ -0.39
GPN1-207ENST00000478484 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
GPN1-207ENST00000478484 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
GPN1-207ENST00000478484 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
GPN1-207ENST00000478484 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
GPN1-207ENST00000478484 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
GPN1-207ENST00000478484 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
GPN1-207ENST00000478484 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
GPN1-207ENST00000478484 CFTRP13569 1480 aa12.52□□□□□ -0.41
GPN1-207ENST00000478484 PDS5BQ9NTI5 1447 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms