RNA–Protein interactions for RNA: ENST00000478344.6

EXD3-206, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 2,932 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-206ENST00000478344 LRRC9Q6ZRR7 1453 aa21.17■□□□□ 0.98
EXD3-206ENST00000478344 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
EXD3-206ENST00000478344 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
EXD3-206ENST00000478344 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
EXD3-206ENST00000478344 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
EXD3-206ENST00000478344 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
EXD3-206ENST00000478344 MAPKBP1O60336 1514 aa21.11■□□□□ 0.97
EXD3-206ENST00000478344 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
EXD3-206ENST00000478344 FHOD3Q2V2M9 1422 aa21.09■□□□□ 0.97
EXD3-206ENST00000478344 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
EXD3-206ENST00000478344 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
EXD3-206ENST00000478344 NESP48681 1621 aa21.05■□□□□ 0.96
EXD3-206ENST00000478344 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
EXD3-206ENST00000478344 TOPBP1Q92547 1522 aa21.02■□□□□ 0.96
EXD3-206ENST00000478344 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
EXD3-206ENST00000478344 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
EXD3-206ENST00000478344 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
EXD3-206ENST00000478344 CFAP43Q8NDM7 1665 aa20.97■□□□□ 0.95
EXD3-206ENST00000478344 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
EXD3-206ENST00000478344 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
EXD3-206ENST00000478344 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
EXD3-206ENST00000478344 FYCO1Q9BQS8 1478 aa20.93■□□□□ 0.94
EXD3-206ENST00000478344 HIRIP3Q9BW71 556 aaPredicted RBP20.92■□□□□ 0.94
EXD3-206ENST00000478344 SUPT16HQ9Y5B9 1047 aaKnown RBP20.91■□□□□ 0.94
EXD3-206ENST00000478344 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
EXD3-206ENST00000478344 EFCAB5A4FU69 1503 aa20.89■□□□□ 0.94
EXD3-206ENST00000478344 CUL7Q14999 1698 aa20.86■□□□□ 0.93
EXD3-206ENST00000478344 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.93
EXD3-206ENST00000478344 FMN1Q68DA7 1419 aa20.85■□□□□ 0.93
EXD3-206ENST00000478344 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
EXD3-206ENST00000478344 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
EXD3-206ENST00000478344 PPP1R15AO75807 674 aaPredicted RBP20.84■□□□□ 0.93
EXD3-206ENST00000478344 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
EXD3-206ENST00000478344 FGD6Q6ZV73 1430 aa20.83■□□□□ 0.93
EXD3-206ENST00000478344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.927e-7■■■■■ 46.1
EXD3-206ENST00000478344 TIMELESSQ9UNS1 1208 aa20.82■□□□□ 0.92
EXD3-206ENST00000478344 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
EXD3-206ENST00000478344 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
EXD3-206ENST00000478344 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
EXD3-206ENST00000478344 GAPVD1Q14C86 1478 aa20.77■□□□□ 0.91
EXD3-206ENST00000478344 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
EXD3-206ENST00000478344 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
EXD3-206ENST00000478344 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
EXD3-206ENST00000478344 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
EXD3-206ENST00000478344 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
EXD3-206ENST00000478344 HFM1A2PYH4 1435 aa20.7■□□□□ 0.9
EXD3-206ENST00000478344 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
EXD3-206ENST00000478344 SAMD9Q5K651 1589 aa20.7■□□□□ 0.9
EXD3-206ENST00000478344 MYOM3Q5VTT5 1437 aa20.68■□□□□ 0.9
EXD3-206ENST00000478344 UACAQ9BZF9 1416 aa20.68■□□□□ 0.9
EXD3-206ENST00000478344 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
EXD3-206ENST00000478344 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
EXD3-206ENST00000478344 CHIC2Q9UKJ5 165 aa20.67■□□□□ 0.9
EXD3-206ENST00000478344 NAIPQ13075 1403 aa20.67■□□□□ 0.9
EXD3-206ENST00000478344 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
EXD3-206ENST00000478344 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
EXD3-206ENST00000478344 ANP32CO43423 234 aa20.65■□□□□ 0.9
EXD3-206ENST00000478344 BCANQ96GW7 911 aa20.64■□□□□ 0.89
EXD3-206ENST00000478344 TRIM52Q96A61 297 aa20.64■□□□□ 0.89
EXD3-206ENST00000478344 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
EXD3-206ENST00000478344 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
EXD3-206ENST00000478344 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
EXD3-206ENST00000478344 FKBP8Q14318 412 aa20.59■□□□□ 0.89
EXD3-206ENST00000478344 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.88
EXD3-206ENST00000478344 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
EXD3-206ENST00000478344 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
EXD3-206ENST00000478344 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
EXD3-206ENST00000478344 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
EXD3-206ENST00000478344 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
EXD3-206ENST00000478344 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
EXD3-206ENST00000478344 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
EXD3-206ENST00000478344 KDM5BQ9UGL1 1544 aa20.49■□□□□ 0.87
EXD3-206ENST00000478344 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
EXD3-206ENST00000478344 FOXD1Q16676 465 aa20.48■□□□□ 0.87
EXD3-206ENST00000478344 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
EXD3-206ENST00000478344 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
EXD3-206ENST00000478344 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
EXD3-206ENST00000478344 IQGAP2Q13576 1575 aa20.45■□□□□ 0.86
EXD3-206ENST00000478344 TCOF1Q13428 1488 aaKnown RBP20.45■□□□□ 0.86
EXD3-206ENST00000478344 MPHOSPH9Q99550 1183 aa20.45■□□□□ 0.86
EXD3-206ENST00000478344 KDM6BO15054 1643 aa20.45■□□□□ 0.86
EXD3-206ENST00000478344 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
EXD3-206ENST00000478344 NEFLP07196 543 aa20.43■□□□□ 0.86
EXD3-206ENST00000478344 WASHC2AQ641Q2 1341 aa20.42■□□□□ 0.86
EXD3-206ENST00000478344 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
EXD3-206ENST00000478344 L3MBTL2Q969R5 705 aa20.4■□□□□ 0.86
EXD3-206ENST00000478344 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
EXD3-206ENST00000478344 MIA2Q96PC5 1412 aa20.38■□□□□ 0.85
EXD3-206ENST00000478344 ZNF644Q9H582 1327 aaPredicted RBP20.38■□□□□ 0.85
EXD3-206ENST00000478344 EIF4G2P78344 907 aaKnown RBP eCLIP20.37■□□□□ 0.852e-6■■■■■ 36
EXD3-206ENST00000478344 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
EXD3-206ENST00000478344 HNRNPUQ00839 825 aaKnown RBP eCLIP20.36■□□□□ 0.85
EXD3-206ENST00000478344 WDR62O43379 1518 aa20.36■□□□□ 0.85
EXD3-206ENST00000478344 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
EXD3-206ENST00000478344 AKNAQ7Z591 1439 aa20.34■□□□□ 0.85
EXD3-206ENST00000478344 C11orf95C9JLR9 678 aaPredicted RBP20.32■□□□□ 0.84
EXD3-206ENST00000478344 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
EXD3-206ENST00000478344 DAPK1P53355 1430 aa20.29■□□□□ 0.84
EXD3-206ENST00000478344 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
EXD3-206ENST00000478344 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms